EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002217 (Gene tree)
Gene ID: 109520526
Gene Symbol: rab18b
Alias: zgc:92523
Full Name: ras-related protein Rab-18-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4141 bases
Position: chrKV880096.1:313873-318013
Accession: 109520526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000017995	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012360	-	1931	XM_019877813	ENSHCOP00000017995	205 (aa)	XP_019733372	UPI00094F1FF3

Gene Model

Click here to download ENSHCOG00000002217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002217	rab18b	83	41.618	ENSHCOG00000003981	RAB39B	81	41.618
ENSHCOG00000002217	rab18b	82	35.882	ENSHCOG00000018456	si:ch73-116o1.2	81	35.882
ENSHCOG00000002217	rab18b	94	33.503	ENSHCOG00000004086	rab9a	98	33.503
ENSHCOG00000002217	rab18b	59	54.167	ENSHCOG00000010707	rab30	63	54.167
ENSHCOG00000002217	rab18b	79	40.964	ENSHCOG00000005802	RAB9A	78	40.964
ENSHCOG00000002217	rab18b	96	40.000	ENSHCOG00000013095	rab25a	97	40.000
ENSHCOG00000002217	rab18b	81	49.102	ENSHCOG00000019468	rab1ba	83	49.102
ENSHCOG00000002217	rab18b	87	44.693	ENSHCOG00000007440	rab13	90	46.951
ENSHCOG00000002217	rab18b	81	50.299	ENSHCOG00000010023	-	96	45.178
ENSHCOG00000002217	rab18b	83	45.614	ENSHCOG00000005652	rab11a	79	45.614
ENSHCOG00000002217	rab18b	83	39.181	ENSHCOG00000004404	rab41	79	39.181
ENSHCOG00000002217	rab18b	85	31.429	ENSHCOG00000009757	ran	80	31.429
ENSHCOG00000002217	rab18b	96	35.176	ENSHCOG00000014711	rab6ba	95	35.176
ENSHCOG00000002217	rab18b	77	32.278	ENSHCOG00000013807	rheb	85	32.278
ENSHCOG00000002217	rab18b	93	42.157	ENSHCOG00000019224	rab14	94	42.157
ENSHCOG00000002217	rab18b	83	41.860	ENSHCOG00000019732	-	81	41.860
ENSHCOG00000002217	rab18b	71	44.898	ENSHCOG00000004726	rab33a	63	44.898
ENSHCOG00000002217	rab18b	80	45.455	ENSHCOG00000004662	rab5c	81	43.878
ENSHCOG00000002217	rab18b	76	41.358	ENSHCOG00000012834	-	69	41.358
ENSHCOG00000002217	rab18b	84	44.509	ENSHCOG00000006538	si:dkey-16l2.16	85	43.575
ENSHCOG00000002217	rab18b	79	32.530	ENSHCOG00000002948	dnajc27	61	32.530
ENSHCOG00000002217	rab18b	80	41.317	ENSHCOG00000015692	si:dkey-34d22.5	77	41.317
ENSHCOG00000002217	rab18b	79	47.531	ENSHCOG00000017123	-	75	47.531
ENSHCOG00000002217	rab18b	88	33.152	ENSHCOG00000020527	rab34a	69	33.152
ENSHCOG00000002217	rab18b	79	46.951	ENSHCOG00000012376	rab12	67	46.951
ENSHCOG00000002217	rab18b	83	39.766	ENSHCOG00000013130	rab6bb	80	39.766
ENSHCOG00000002217	rab18b	83	40.936	ENSHCOG00000006550	-	80	40.936
ENSHCOG00000002217	rab18b	79	46.914	ENSHCOG00000000232	rab11al	75	46.914
ENSHCOG00000002217	rab18b	80	44.512	ENSHCOG00000017086	RAB15	76	44.512
ENSHCOG00000002217	rab18b	83	46.784	ENSHCOG00000000954	-	78	46.784
ENSHCOG00000002217	rab18b	79	50.617	ENSHCOG00000001137	rab1ab	79	50.617
ENSHCOG00000002217	rab18b	78	45.625	ENSHCOG00000007187	rab25b	69	45.625
ENSHCOG00000002217	rab18b	89	46.809	ENSHCOG00000014428	rab2a	97	45.455
ENSHCOG00000002217	rab18b	71	43.243	ENSHCOG00000009133	zgc:101559	63	43.243
ENSHCOG00000002217	rab18b	79	45.679	ENSHCOG00000020238	-	74	45.679
ENSHCOG00000002217	rab18b	95	33.498	ENSHCOG00000004225	-	96	33.498
ENSHCOG00000002217	rab18b	83	46.199	ENSHCOG00000002423	rab11bb	78	46.199
ENSHCOG00000002217	rab18b	80	36.527	ENSHCOG00000016322	RAB7A	81	36.527
ENSHCOG00000002217	rab18b	94	41.753	ENSHCOG00000001145	rab22a	98	41.753
ENSHCOG00000002217	rab18b	80	46.667	ENSHCOG00000013180	-	76	46.667
ENSHCOG00000002217	rab18b	81	33.735	ENSHCOG00000011080	kras	87	34.146
ENSHCOG00000002217	rab18b	83	45.614	ENSHCOG00000000985	-	81	46.386
ENSHCOG00000002217	rab18b	79	37.952	ENSHCOG00000005024	rab9b	82	37.952
ENSHCOG00000002217	rab18b	73	36.000	ENSHCOG00000002043	rras2	83	36.095
ENSHCOG00000002217	rab18b	80	40.237	ENSHCOG00000003569	rab33ba	70	40.237
ENSHCOG00000002217	rab18b	75	35.714	ENSHCOG00000013919	rab23	99	32.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002217	rab18b	99	83.902	ENSG00000099246	RAB18	99	84.390	Homo_sapiens
ENSHCOG00000002217	rab18b	100	94.146	ENSAPOG00000019881	rab18b	100	94.146	Acanthochromis_polyacanthus
ENSHCOG00000002217	rab18b	99	72.766	ENSAMEG00000015990	RAB18	99	73.191	Ailuropoda_melanoleuca
ENSHCOG00000002217	rab18b	100	93.171	ENSACIG00000008102	rab18b	100	93.171	Amphilophus_citrinellus
ENSHCOG00000002217	rab18b	100	93.659	ENSAOCG00000013479	rab18b	100	93.659	Amphiprion_ocellaris
ENSHCOG00000002217	rab18b	100	94.146	ENSAPEG00000022923	rab18b	100	94.146	Amphiprion_percula
ENSHCOG00000002217	rab18b	99	92.157	ENSATEG00000002952	rab18b	99	92.157	Anabas_testudineus
ENSHCOG00000002217	rab18b	99	83.902	ENSANAG00000035856	RAB18	99	84.390	Aotus_nancymaae
ENSHCOG00000002217	rab18b	100	93.659	ENSACLG00000015289	rab18b	100	93.659	Astatotilapia_calliptera
ENSHCOG00000002217	rab18b	99	86.275	ENSAMXG00000042073	rab18b	99	86.275	Astyanax_mexicanus
ENSHCOG00000002217	rab18b	99	82.927	ENSBTAG00000050873	-	99	82.927	Bos_taurus
ENSHCOG00000002217	rab18b	99	83.902	ENSBTAG00000009871	RAB18	88	84.390	Bos_taurus
ENSHCOG00000002217	rab18b	99	83.902	ENSCJAG00000045749	RAB18	99	84.390	Callithrix_jacchus
ENSHCOG00000002217	rab18b	99	83.415	ENSCAFG00020003253	RAB18	99	83.902	Canis_lupus_dingo
ENSHCOG00000002217	rab18b	99	83.902	ENSCHIG00000008749	RAB18	99	84.390	Capra_hircus
ENSHCOG00000002217	rab18b	99	83.902	ENSTSYG00000013092	RAB18	99	84.390	Carlito_syrichta
ENSHCOG00000002217	rab18b	99	83.902	ENSCPOG00000032827	RAB18	99	83.902	Cavia_porcellus
ENSHCOG00000002217	rab18b	99	83.902	ENSCCAG00000006762	RAB18	99	84.390	Cebus_capucinus
ENSHCOG00000002217	rab18b	99	83.902	ENSCATG00000009672	RAB18	99	84.390	Cercocebus_atys
ENSHCOG00000002217	rab18b	99	83.902	ENSCSAG00000011749	RAB18	99	84.390	Chlorocebus_sabaeus
ENSHCOG00000002217	rab18b	99	83.902	ENSCANG00000035397	RAB18	99	84.390	Colobus_angolensis_palliatus
ENSHCOG00000002217	rab18b	99	83.902	ENSCGRG00001017519	Rab18	99	83.902	Cricetulus_griseus_chok1gshd
ENSHCOG00000002217	rab18b	99	83.902	ENSCGRG00000017201	Rab18	99	83.902	Cricetulus_griseus_crigri
ENSHCOG00000002217	rab18b	95	93.846	ENSCSEG00000016803	rab18b	99	93.846	Cynoglossus_semilaevis
ENSHCOG00000002217	rab18b	99	85.784	ENSDARG00000098344	rab18b	99	85.784	Danio_rerio
ENSHCOG00000002217	rab18b	55	87.611	ENSDNOG00000038845	-	75	87.611	Dasypus_novemcinctus
ENSHCOG00000002217	rab18b	99	83.902	ENSDNOG00000047713	RAB18	99	84.390	Dasypus_novemcinctus
ENSHCOG00000002217	rab18b	99	83.902	ENSDORG00000028596	-	99	83.902	Dipodomys_ordii
ENSHCOG00000002217	rab18b	85	81.034	ENSDORG00000029360	-	83	81.034	Dipodomys_ordii
ENSHCOG00000002217	rab18b	99	83.902	ENSEASG00005007164	RAB18	99	84.390	Equus_asinus_asinus
ENSHCOG00000002217	rab18b	99	83.902	ENSECAG00000017521	RAB18	88	84.390	Equus_caballus
ENSHCOG00000002217	rab18b	100	83.495	ENSELUG00000016450	rab18b	100	83.495	Esox_lucius
ENSHCOG00000002217	rab18b	99	83.415	ENSFCAG00000027161	RAB18	99	83.902	Felis_catus
ENSHCOG00000002217	rab18b	94	85.417	ENSFALG00000007160	RAB18	99	84.466	Ficedula_albicollis
ENSHCOG00000002217	rab18b	100	91.220	ENSFHEG00000020035	rab18b	100	91.220	Fundulus_heteroclitus
ENSHCOG00000002217	rab18b	100	83.415	ENSGMOG00000016608	rab18b	100	83.415	Gadus_morhua
ENSHCOG00000002217	rab18b	99	84.878	ENSGALG00000007435	RAB18	99	85.366	Gallus_gallus
ENSHCOG00000002217	rab18b	100	91.707	ENSGAFG00000008560	rab18b	100	91.707	Gambusia_affinis
ENSHCOG00000002217	rab18b	100	93.659	ENSGACG00000016395	rab18b	100	93.659	Gasterosteus_aculeatus
ENSHCOG00000002217	rab18b	99	83.902	ENSGGOG00000008086	RAB18	99	84.390	Gorilla_gorilla
ENSHCOG00000002217	rab18b	100	93.659	ENSHBUG00000003696	rab18b	100	93.659	Haplochromis_burtoni
ENSHCOG00000002217	rab18b	99	73.039	ENSHGLG00000007301	-	95	73.039	Heterocephalus_glaber_female
ENSHCOG00000002217	rab18b	99	84.390	ENSHGLG00000004365	RAB18	99	84.390	Heterocephalus_glaber_female
ENSHCOG00000002217	rab18b	99	84.390	ENSHGLG00100013089	-	99	84.390	Heterocephalus_glaber_male
ENSHCOG00000002217	rab18b	99	73.039	ENSHGLG00100009117	-	95	73.039	Heterocephalus_glaber_male
ENSHCOG00000002217	rab18b	99	83.333	ENSIPUG00000010859	rab18b	99	83.333	Ictalurus_punctatus
ENSHCOG00000002217	rab18b	99	83.902	ENSSTOG00000014560	-	99	83.902	Ictidomys_tridecemlineatus
ENSHCOG00000002217	rab18b	100	89.756	ENSKMAG00000007364	rab18b	100	89.756	Kryptolebias_marmoratus
ENSHCOG00000002217	rab18b	100	92.683	ENSLBEG00000019428	rab18b	100	92.683	Labrus_bergylta
ENSHCOG00000002217	rab18b	99	75.490	ENSLACG00000011256	rab18b	99	75.490	Latimeria_chalumnae
ENSHCOG00000002217	rab18b	94	84.375	ENSLAFG00000015582	RAB18	99	84.390	Loxodonta_africana
ENSHCOG00000002217	rab18b	99	83.902	ENSMFAG00000006430	RAB18	99	84.390	Macaca_fascicularis
ENSHCOG00000002217	rab18b	98	83.582	ENSMMUG00000046971	RAB18	73	83.582	Macaca_mulatta
ENSHCOG00000002217	rab18b	99	83.902	ENSMNEG00000038180	RAB18	99	84.390	Macaca_nemestrina
ENSHCOG00000002217	rab18b	99	83.902	ENSMLEG00000033595	RAB18	99	84.390	Mandrillus_leucophaeus
ENSHCOG00000002217	rab18b	99	92.157	ENSMAMG00000018445	rab18b	99	92.157	Mastacembelus_armatus
ENSHCOG00000002217	rab18b	100	93.659	ENSMZEG00005008244	rab18b	100	93.659	Maylandia_zebra
ENSHCOG00000002217	rab18b	99	75.000	ENSMAUG00000020698	-	99	75.000	Mesocricetus_auratus
ENSHCOG00000002217	rab18b	94	84.375	ENSMICG00000017280	RAB18	99	84.390	Microcebus_murinus
ENSHCOG00000002217	rab18b	99	83.902	ENSMOCG00000013044	Rab18	99	83.902	Microtus_ochrogaster
ENSHCOG00000002217	rab18b	100	76.959	ENSMMOG00000017849	rab18b	100	77.880	Mola_mola
ENSHCOG00000002217	rab18b	99	83.824	ENSMODG00000008253	RAB18	99	83.824	Monodelphis_domestica
ENSHCOG00000002217	rab18b	99	76.961	ENSMODG00000024936	-	99	76.961	Monodelphis_domestica
ENSHCOG00000002217	rab18b	99	93.137	ENSMALG00000005069	rab18b	99	93.137	Monopterus_albus
ENSHCOG00000002217	rab18b	99	83.902	MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	Mus_caroli
ENSHCOG00000002217	rab18b	99	83.902	ENSMUSG00000073639	Rab18	99	83.902	Mus_musculus
ENSHCOG00000002217	rab18b	99	83.902	MGP_PahariEiJ_G0018716	Rab18	99	83.902	Mus_pahari
ENSHCOG00000002217	rab18b	99	83.902	MGP_SPRETEiJ_G0022894	Rab18	99	83.902	Mus_spretus
ENSHCOG00000002217	rab18b	99	83.415	ENSMPUG00000010592	RAB18	99	83.902	Mustela_putorius_furo
ENSHCOG00000002217	rab18b	99	73.191	ENSMLUG00000027295	RAB18	99	73.617	Myotis_lucifugus
ENSHCOG00000002217	rab18b	99	83.902	ENSNGAG00000001465	Rab18	99	83.902	Nannospalax_galili
ENSHCOG00000002217	rab18b	100	93.171	ENSNBRG00000008137	rab18b	100	93.171	Neolamprologus_brichardi
ENSHCOG00000002217	rab18b	99	83.902	ENSNLEG00000016970	RAB18	99	84.390	Nomascus_leucogenys
ENSHCOG00000002217	rab18b	99	83.902	ENSODEG00000004150	-	99	83.902	Octodon_degus
ENSHCOG00000002217	rab18b	100	93.171	ENSONIG00000018673	rab18b	100	93.171	Oreochromis_niloticus
ENSHCOG00000002217	rab18b	91	86.631	ENSOANG00000021391	RAB18	99	84.878	Ornithorhynchus_anatinus
ENSHCOG00000002217	rab18b	99	83.415	ENSOCUG00000022307	RAB18	99	83.415	Oryctolagus_cuniculus
ENSHCOG00000002217	rab18b	100	90.732	ENSORLG00000009609	rab18b	100	90.732	Oryzias_latipes
ENSHCOG00000002217	rab18b	100	90.732	ENSORLG00020011590	rab18b	100	90.732	Oryzias_latipes_hni
ENSHCOG00000002217	rab18b	100	90.732	ENSORLG00015007182	rab18b	100	90.732	Oryzias_latipes_hsok
ENSHCOG00000002217	rab18b	100	90.244	ENSOMEG00000007546	rab18b	100	90.244	Oryzias_melastigma
ENSHCOG00000002217	rab18b	94	84.375	ENSOGAG00000028015	RAB18	99	84.390	Otolemur_garnettii
ENSHCOG00000002217	rab18b	99	83.902	ENSOARG00000016208	RAB18	99	84.390	Ovis_aries
ENSHCOG00000002217	rab18b	99	83.902	ENSPPAG00000041625	RAB18	99	84.390	Pan_paniscus
ENSHCOG00000002217	rab18b	99	83.415	ENSPPRG00000010314	RAB18	99	83.902	Panthera_pardus
ENSHCOG00000002217	rab18b	99	83.415	ENSPTIG00000011667	RAB18	99	83.902	Panthera_tigris_altaica
ENSHCOG00000002217	rab18b	99	83.902	ENSPTRG00000002384	RAB18	99	84.390	Pan_troglodytes
ENSHCOG00000002217	rab18b	99	83.902	ENSPANG00000023005	RAB18	99	84.390	Papio_anubis
ENSHCOG00000002217	rab18b	98	82.927	ENSPMAG00000005322	rab18b	98	82.927	Petromyzon_marinus
ENSHCOG00000002217	rab18b	99	84.314	ENSPCIG00000028705	-	88	84.314	Phascolarctos_cinereus
ENSHCOG00000002217	rab18b	100	91.707	ENSPFOG00000013491	rab18b	100	91.707	Poecilia_formosa
ENSHCOG00000002217	rab18b	100	91.707	ENSPLAG00000019136	rab18b	100	91.707	Poecilia_latipinna
ENSHCOG00000002217	rab18b	100	91.707	ENSPMEG00000008223	rab18b	100	91.707	Poecilia_mexicana
ENSHCOG00000002217	rab18b	99	83.902	ENSPPYG00000002172	RAB18	99	84.390	Pongo_abelii
ENSHCOG00000002217	rab18b	94	84.375	ENSPCOG00000018906	RAB18	99	84.390	Propithecus_coquereli
ENSHCOG00000002217	rab18b	100	93.659	ENSPNYG00000001751	rab18b	100	93.659	Pundamilia_nyererei
ENSHCOG00000002217	rab18b	99	84.804	ENSPNAG00000002404	rab18b	99	84.804	Pygocentrus_nattereri
ENSHCOG00000002217	rab18b	99	83.902	ENSRNOG00000018972	Rab18	99	83.902	Rattus_norvegicus
ENSHCOG00000002217	rab18b	99	83.415	ENSRBIG00000035948	RAB18	99	83.902	Rhinopithecus_bieti
ENSHCOG00000002217	rab18b	99	83.902	ENSRROG00000040563	RAB18	99	84.390	Rhinopithecus_roxellana
ENSHCOG00000002217	rab18b	99	84.314	ENSSHAG00000007613	RAB18	99	84.314	Sarcophilus_harrisii
ENSHCOG00000002217	rab18b	100	94.146	ENSSMAG00000011814	rab18b	100	94.146	Scophthalmus_maximus
ENSHCOG00000002217	rab18b	100	94.634	ENSSDUG00000005960	rab18b	100	94.634	Seriola_dumerili
ENSHCOG00000002217	rab18b	100	94.634	ENSSLDG00000006014	rab18b	100	94.634	Seriola_lalandi_dorsalis
ENSHCOG00000002217	rab18b	100	94.146	ENSSPAG00000020875	rab18b	100	94.146	Stegastes_partitus
ENSHCOG00000002217	rab18b	99	83.902	ENSSSCG00000028655	RAB18	99	84.390	Sus_scrofa
ENSHCOG00000002217	rab18b	94	74.886	ENSTGUG00000001105	-	99	74.678	Taeniopygia_guttata
ENSHCOG00000002217	rab18b	100	89.756	ENSTRUG00000004283	rab18b	100	89.756	Takifugu_rubripes
ENSHCOG00000002217	rab18b	100	88.835	ENSTNIG00000007882	rab18b	100	88.835	Tetraodon_nigroviridis
ENSHCOG00000002217	rab18b	99	83.415	ENSVVUG00000001705	RAB18	99	83.902	Vulpes_vulpes
ENSHCOG00000002217	rab18b	100	92.195	ENSXMAG00000006945	rab18b	100	92.195	Xiphophorus_maculatus