EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002345 (Gene tree)
Gene ID: -
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 16297 bases
Position: chrKV880528.1:262589-278885
Accession: ZDB-GENE-050419-73
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001393	zf-C2H2	PF00096.26	2.1e-14	1	3
ENSHCOP00000001393	zf-C2H2	PF00096.26	2.1e-14	2	3
ENSHCOP00000001393	zf-C2H2	PF00096.26	2.1e-14	3	3
ENSHCOP00000001393	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012185	-	912	-	ENSHCOP00000001393	303 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000002345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002345	zbtb18	53	37.288	ENSHCOG00000020972	-	92	37.288
ENSHCOG00000002345	zbtb18	55	39.474	ENSHCOG00000001252	-	95	39.474
ENSHCOG00000002345	zbtb18	92	32.231	ENSHCOG00000013654	-	87	32.231
ENSHCOG00000002345	zbtb18	62	37.288	ENSHCOG00000015237	-	70	37.288
ENSHCOG00000002345	zbtb18	55	41.525	ENSHCOG00000007664	-	96	46.970
ENSHCOG00000002345	zbtb18	68	36.765	ENSHCOG00000000800	-	85	36.765
ENSHCOG00000002345	zbtb18	53	38.679	ENSHCOG00000008213	-	50	38.679
ENSHCOG00000002345	zbtb18	74	44.000	ENSHCOG00000013830	zbtb49	60	44.000
ENSHCOG00000002345	zbtb18	50	40.385	ENSHCOG00000001942	-	94	45.283
ENSHCOG00000002345	zbtb18	93	39.362	ENSHCOG00000012012	bcl6b	50	39.362
ENSHCOG00000002345	zbtb18	59	41.333	ENSHCOG00000008168	-	95	41.333
ENSHCOG00000002345	zbtb18	64	30.769	ENSHCOG00000014781	-	75	33.846
ENSHCOG00000002345	zbtb18	52	35.897	ENSHCOG00000008906	-	84	38.136
ENSHCOG00000002345	zbtb18	57	42.553	ENSHCOG00000002969	-	51	42.553
ENSHCOG00000002345	zbtb18	94	36.667	ENSHCOG00000004326	GZF1	84	35.897
ENSHCOG00000002345	zbtb18	50	43.243	ENSHCOG00000014881	-	61	43.243
ENSHCOG00000002345	zbtb18	51	42.667	ENSHCOG00000011433	-	81	42.667
ENSHCOG00000002345	zbtb18	56	46.512	ENSHCOG00000001338	-	93	46.512
ENSHCOG00000002345	zbtb18	66	38.983	ENSHCOG00000021033	-	71	38.983
ENSHCOG00000002345	zbtb18	53	40.000	ENSHCOG00000001272	-	96	40.000
ENSHCOG00000002345	zbtb18	74	39.831	ENSHCOG00000010142	zbtb16a	51	39.831
ENSHCOG00000002345	zbtb18	77	36.250	ENSHCOG00000001875	zbtb41	80	36.250
ENSHCOG00000002345	zbtb18	50	41.096	ENSHCOG00000000517	-	63	41.096
ENSHCOG00000002345	zbtb18	58	36.441	ENSHCOG00000014986	-	98	36.441
ENSHCOG00000002345	zbtb18	50	42.056	ENSHCOG00000015355	-	94	48.077
ENSHCOG00000002345	zbtb18	64	39.362	ENSHCOG00000008234	-	71	38.667
ENSHCOG00000002345	zbtb18	59	41.333	ENSHCOG00000007485	-	93	41.333
ENSHCOG00000002345	zbtb18	50	41.333	ENSHCOG00000013455	-	93	41.237
ENSHCOG00000002345	zbtb18	57	32.948	ENSHCOG00000014850	-	63	38.532
ENSHCOG00000002345	zbtb18	52	46.392	ENSHCOG00000015105	-	97	46.392
ENSHCOG00000002345	zbtb18	53	37.815	ENSHCOG00000019006	-	51	40.426
ENSHCOG00000002345	zbtb18	52	34.746	ENSHCOG00000013489	-	88	34.746
ENSHCOG00000002345	zbtb18	56	35.593	ENSHCOG00000001318	-	96	37.895
ENSHCOG00000002345	zbtb18	92	37.391	ENSHCOG00000017431	zbtb24	78	37.391
ENSHCOG00000002345	zbtb18	53	37.870	ENSHCOG00000015000	-	92	37.870
ENSHCOG00000002345	zbtb18	79	35.115	ENSHCOG00000001345	-	99	35.115
ENSHCOG00000002345	zbtb18	55	36.441	ENSHCOG00000012175	-	93	36.441
ENSHCOG00000002345	zbtb18	52	39.167	ENSHCOG00000008028	-	86	39.167
ENSHCOG00000002345	zbtb18	78	40.000	ENSHCOG00000017644	patz1	61	40.000
ENSHCOG00000002345	zbtb18	92	34.959	ENSHCOG00000008115	ZBTB14	90	34.959
ENSHCOG00000002345	zbtb18	52	43.617	ENSHCOG00000020725	-	58	43.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002345	zbtb18	94	81.053	ENSAPOG00000005168	zbtb18	60	81.053	Acanthochromis_polyacanthus
ENSHCOG00000002345	zbtb18	94	82.632	ENSACIG00000008655	zbtb18	68	82.632	Amphilophus_citrinellus
ENSHCOG00000002345	zbtb18	94	81.053	ENSAOCG00000014105	zbtb18	60	81.053	Amphiprion_ocellaris
ENSHCOG00000002345	zbtb18	94	81.053	ENSAPEG00000003817	zbtb18	58	81.053	Amphiprion_percula
ENSHCOG00000002345	zbtb18	94	82.105	ENSATEG00000010192	zbtb18	61	82.105	Anabas_testudineus
ENSHCOG00000002345	zbtb18	94	88.710	ENSACLG00000022978	zbtb18	54	88.710	Astatotilapia_calliptera
ENSHCOG00000002345	zbtb18	94	82.353	ENSAMXG00000042119	zbtb18	63	82.353	Astyanax_mexicanus
ENSHCOG00000002345	zbtb18	94	82.105	ENSCSEG00000003083	zbtb18	61	82.105	Cynoglossus_semilaevis
ENSHCOG00000002345	zbtb18	94	83.158	ENSCVAG00000016785	zbtb18	61	83.158	Cyprinodon_variegatus
ENSHCOG00000002345	zbtb18	94	80.423	ENSDARG00000028228	zbtb18	65	81.818	Danio_rerio
ENSHCOG00000002345	zbtb18	94	77.387	ENSELUG00000013471	zbtb18	64	77.387	Esox_lucius
ENSHCOG00000002345	zbtb18	94	88.710	ENSFHEG00000020005	zbtb18	54	88.710	Fundulus_heteroclitus
ENSHCOG00000002345	zbtb18	94	87.903	ENSGAFG00000000619	zbtb18	55	87.903	Gambusia_affinis
ENSHCOG00000002345	zbtb18	94	81.579	ENSGACG00000010518	zbtb18	61	81.579	Gasterosteus_aculeatus
ENSHCOG00000002345	zbtb18	94	88.710	ENSHBUG00000013654	zbtb18	54	88.710	Haplochromis_burtoni
ENSHCOG00000002345	zbtb18	94	94.545	ENSIPUG00000008912	zbtb18	64	79.558	Ictalurus_punctatus
ENSHCOG00000002345	zbtb18	94	83.158	ENSKMAG00000002780	zbtb18	61	83.158	Kryptolebias_marmoratus
ENSHCOG00000002345	zbtb18	95	88.000	ENSLBEG00000014796	zbtb18	55	88.000	Labrus_bergylta
ENSHCOG00000002345	zbtb18	76	92.727	ENSMFAG00000033326	ZBTB18	62	73.826	Macaca_fascicularis
ENSHCOG00000002345	zbtb18	76	92.727	ENSMMUG00000015664	ZBTB18	63	73.826	Macaca_mulatta
ENSHCOG00000002345	zbtb18	94	82.632	ENSMAMG00000021720	zbtb18	61	82.632	Mastacembelus_armatus
ENSHCOG00000002345	zbtb18	94	88.710	ENSMZEG00005027394	zbtb18	54	88.710	Maylandia_zebra
ENSHCOG00000002345	zbtb18	90	78.832	ENSMGAG00000015389	-	58	78.832	Meleagris_gallopavo
ENSHCOG00000002345	zbtb18	94	82.632	ENSMMOG00000007888	zbtb18	68	82.632	Mola_mola
ENSHCOG00000002345	zbtb18	94	82.632	ENSMALG00000000725	zbtb18	61	82.632	Monopterus_albus
ENSHCOG00000002345	zbtb18	94	82.105	ENSNBRG00000013796	zbtb18	62	82.105	Neolamprologus_brichardi
ENSHCOG00000002345	zbtb18	94	82.632	ENSONIG00000000862	zbtb18	54	88.710	Oreochromis_niloticus
ENSHCOG00000002345	zbtb18	94	82.632	ENSORLG00000027425	zbtb18	60	82.632	Oryzias_latipes
ENSHCOG00000002345	zbtb18	94	82.632	ENSORLG00020011988	zbtb18	60	82.632	Oryzias_latipes_hni
ENSHCOG00000002345	zbtb18	95	88.000	ENSORLG00015017457	zbtb18	60	82.632	Oryzias_latipes_hsok
ENSHCOG00000002345	zbtb18	94	82.632	ENSOMEG00000011249	zbtb18	60	82.632	Oryzias_melastigma
ENSHCOG00000002345	zbtb18	94	93.636	ENSPKIG00000021964	zbtb18	63	81.720	Paramormyrops_kingsleyae
ENSHCOG00000002345	zbtb18	94	82.632	ENSPMGG00000008020	zbtb18	68	82.632	Periophthalmus_magnuspinnatus
ENSHCOG00000002345	zbtb18	94	83.333	ENSPFOG00000022080	zbtb18	62	83.333	Poecilia_formosa
ENSHCOG00000002345	zbtb18	94	82.723	ENSPLAG00000020960	zbtb18	67	82.723	Poecilia_latipinna
ENSHCOG00000002345	zbtb18	94	82.723	ENSPLAG00000011299	-	67	82.723	Poecilia_latipinna
ENSHCOG00000002345	zbtb18	94	83.246	ENSPMEG00000007554	zbtb18	62	83.246	Poecilia_mexicana
ENSHCOG00000002345	zbtb18	94	82.723	ENSPREG00000008576	zbtb18	61	82.723	Poecilia_reticulata
ENSHCOG00000002345	zbtb18	94	88.710	ENSPNYG00000001530	zbtb18	54	88.710	Pundamilia_nyererei
ENSHCOG00000002345	zbtb18	83	93.636	ENSPNAG00000014066	zbtb18	58	71.069	Pygocentrus_nattereri
ENSHCOG00000002345	zbtb18	94	83.158	ENSSMAG00000018041	zbtb18	62	83.158	Scophthalmus_maximus
ENSHCOG00000002345	zbtb18	94	82.105	ENSSDUG00000018660	zbtb18	62	82.105	Seriola_dumerili
ENSHCOG00000002345	zbtb18	94	82.105	ENSSLDG00000022573	zbtb18	62	82.105	Seriola_lalandi_dorsalis
ENSHCOG00000002345	zbtb18	86	80.000	ENSSPUG00000010554	-	55	80.000	Sphenodon_punctatus
ENSHCOG00000002345	zbtb18	94	81.053	ENSSPAG00000002691	zbtb18	61	81.053	Stegastes_partitus
ENSHCOG00000002345	zbtb18	94	82.632	ENSTRUG00000020604	zbtb18	62	82.632	Takifugu_rubripes
ENSHCOG00000002345	zbtb18	94	87.097	ENSTNIG00000000430	zbtb18	57	87.097	Tetraodon_nigroviridis
ENSHCOG00000002345	zbtb18	94	82.723	ENSXCOG00000013308	zbtb18	66	82.723	Xiphophorus_couchianus
ENSHCOG00000002345	zbtb18	94	82.723	ENSXMAG00000018241	zbtb18	69	82.723	Xiphophorus_maculatus