EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002390 (Gene tree)
Gene ID: 109512572
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridylate synthase domain-containing protein 1-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2971 bases
Position: chrKV879823.1:98352-101322
Accession: 109512572
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018087	PseudoU_synth_2	PF00849.22	2e-26	1	1
ENSHCOP00000001423	PseudoU_synth_2	PF00849.22	3.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012132	-	915	-	ENSHCOP00000018087	304 (aa)	-	-
ENSHCOT00000012136	-	861	XM_019864417	ENSHCOP00000001423	286 (aa)	XP_019719976	-

Gene Model

Click here to download ENSHCOG00000002390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002390	rpusd1	99	57.516	ENSG00000007376	RPUSD1	100	66.071	Homo_sapiens
ENSHCOG00000002390	rpusd1	99	74.257	ENSAPOG00000022221	rpusd1	99	74.257	Acanthochromis_polyacanthus
ENSHCOG00000002390	rpusd1	99	57.576	ENSAMEG00000007461	RPUSD1	98	57.576	Ailuropoda_melanoleuca
ENSHCOG00000002390	rpusd1	99	74.919	ENSACIG00000015863	rpusd1	99	75.896	Amphilophus_citrinellus
ENSHCOG00000002390	rpusd1	99	72.581	ENSAOCG00000021975	rpusd1	96	74.510	Amphiprion_ocellaris
ENSHCOG00000002390	rpusd1	99	72.903	ENSAPEG00000001316	rpusd1	96	74.837	Amphiprion_percula
ENSHCOG00000002390	rpusd1	99	77.124	ENSATEG00000002984	rpusd1	99	77.124	Anabas_testudineus
ENSHCOG00000002390	rpusd1	77	56.540	ENSAPLG00000012316	RPUSD1	98	56.540	Anas_platyrhynchos
ENSHCOG00000002390	rpusd1	99	64.026	ENSACAG00000008953	RPUSD1	99	64.026	Anolis_carolinensis
ENSHCOG00000002390	rpusd1	99	57.516	ENSANAG00000024709	RPUSD1	98	58.170	Aotus_nancymaae
ENSHCOG00000002390	rpusd1	99	76.299	ENSACLG00000013692	rpusd1	99	76.299	Astatotilapia_calliptera
ENSHCOG00000002390	rpusd1	99	65.753	ENSAMXG00000019802	rpusd1	99	65.753	Astyanax_mexicanus
ENSHCOG00000002390	rpusd1	99	59.076	ENSBTAG00000000179	RPUSD1	98	59.076	Bos_taurus
ENSHCOG00000002390	rpusd1	99	57.516	ENSCJAG00000012253	RPUSD1	98	57.516	Callithrix_jacchus
ENSHCOG00000002390	rpusd1	99	57.576	ENSCAFG00000019614	RPUSD1	98	57.576	Canis_familiaris
ENSHCOG00000002390	rpusd1	99	57.576	ENSCAFG00020008891	RPUSD1	98	57.576	Canis_lupus_dingo
ENSHCOG00000002390	rpusd1	99	58.746	ENSCHIG00000012872	RPUSD1	98	58.746	Capra_hircus
ENSHCOG00000002390	rpusd1	99	57.239	ENSTSYG00000036934	RPUSD1	79	76.699	Carlito_syrichta
ENSHCOG00000002390	rpusd1	99	57.475	ENSCAPG00000014219	RPUSD1	98	57.475	Cavia_aperea
ENSHCOG00000002390	rpusd1	99	57.475	ENSCPOG00000034604	RPUSD1	98	57.475	Cavia_porcellus
ENSHCOG00000002390	rpusd1	99	57.190	ENSCCAG00000034385	RPUSD1	98	57.843	Cebus_capucinus
ENSHCOG00000002390	rpusd1	99	57.655	ENSCATG00000042983	RPUSD1	79	77.670	Cercocebus_atys
ENSHCOG00000002390	rpusd1	99	58.472	ENSCLAG00000013966	RPUSD1	98	58.472	Chinchilla_lanigera
ENSHCOG00000002390	rpusd1	99	58.170	ENSCSAG00000012121	RPUSD1	98	58.497	Chlorocebus_sabaeus
ENSHCOG00000002390	rpusd1	99	61.794	ENSCPBG00000021101	RPUSD1	99	61.794	Chrysemys_picta_bellii
ENSHCOG00000002390	rpusd1	88	66.142	ENSCANG00000028576	RPUSD1	79	77.670	Colobus_angolensis_palliatus
ENSHCOG00000002390	rpusd1	99	57.718	ENSCGRG00001014253	Rpusd1	98	57.718	Cricetulus_griseus_chok1gshd
ENSHCOG00000002390	rpusd1	99	57.718	ENSCGRG00000017995	Rpusd1	98	57.718	Cricetulus_griseus_crigri
ENSHCOG00000002390	rpusd1	99	75.427	ENSCSEG00000018512	rpusd1	99	75.427	Cynoglossus_semilaevis
ENSHCOG00000002390	rpusd1	99	73.856	ENSCVAG00000022746	rpusd1	99	73.856	Cyprinodon_variegatus
ENSHCOG00000002390	rpusd1	99	70.345	ENSDARG00000060192	rpusd1	99	70.345	Danio_rerio
ENSHCOG00000002390	rpusd1	99	57.096	ENSDNOG00000003721	RPUSD1	98	57.705	Dasypus_novemcinctus
ENSHCOG00000002390	rpusd1	99	58.054	ENSDORG00000026656	Rpusd1	98	58.746	Dipodomys_ordii
ENSHCOG00000002390	rpusd1	96	48.515	ENSEBUG00000008767	rpusd1	91	48.515	Eptatretus_burgeri
ENSHCOG00000002390	rpusd1	99	56.774	ENSEASG00005018421	RPUSD1	74	56.774	Equus_asinus_asinus
ENSHCOG00000002390	rpusd1	100	66.667	ENSELUG00000014307	rpusd1	89	67.320	Esox_lucius
ENSHCOG00000002390	rpusd1	99	57.912	ENSFCAG00000010359	RPUSD1	98	57.912	Felis_catus
ENSHCOG00000002390	rpusd1	99	63.455	ENSFALG00000003211	RPUSD1	99	63.455	Ficedula_albicollis
ENSHCOG00000002390	rpusd1	99	57.475	ENSFDAG00000013398	RPUSD1	98	57.475	Fukomys_damarensis
ENSHCOG00000002390	rpusd1	99	73.026	ENSFHEG00000004736	rpusd1	99	73.290	Fundulus_heteroclitus
ENSHCOG00000002390	rpusd1	99	68.750	ENSGMOG00000010756	rpusd1	99	69.079	Gadus_morhua
ENSHCOG00000002390	rpusd1	99	62.458	ENSGALG00000005315	RPUSD1	99	62.458	Gallus_gallus
ENSHCOG00000002390	rpusd1	99	73.856	ENSGAFG00000009886	rpusd1	99	73.856	Gambusia_affinis
ENSHCOG00000002390	rpusd1	99	76.974	ENSGACG00000014276	rpusd1	98	78.947	Gasterosteus_aculeatus
ENSHCOG00000002390	rpusd1	99	61.130	ENSGAGG00000004181	RPUSD1	99	61.130	Gopherus_agassizii
ENSHCOG00000002390	rpusd1	99	57.190	ENSGGOG00000013997	RPUSD1	98	57.516	Gorilla_gorilla
ENSHCOG00000002390	rpusd1	99	76.623	ENSHBUG00000023728	rpusd1	99	76.623	Haplochromis_burtoni
ENSHCOG00000002390	rpusd1	99	57.143	ENSHGLG00000002595	RPUSD1	98	57.143	Heterocephalus_glaber_female
ENSHCOG00000002390	rpusd1	99	57.143	ENSHGLG00100014303	RPUSD1	98	57.143	Heterocephalus_glaber_male
ENSHCOG00000002390	rpusd1	99	64.784	ENSIPUG00000001570	rpusd1	100	64.590	Ictalurus_punctatus
ENSHCOG00000002390	rpusd1	99	59.539	ENSSTOG00000004276	RPUSD1	98	59.539	Ictidomys_tridecemlineatus
ENSHCOG00000002390	rpusd1	99	57.525	ENSJJAG00000015696	Rpusd1	98	57.895	Jaculus_jaculus
ENSHCOG00000002390	rpusd1	99	72.787	ENSKMAG00000017287	rpusd1	99	73.856	Kryptolebias_marmoratus
ENSHCOG00000002390	rpusd1	99	75.817	ENSLBEG00000013354	RPUSD1	99	75.817	Labrus_bergylta
ENSHCOG00000002390	rpusd1	99	75.817	ENSLBEG00000022502	rpusd1	99	75.817	Labrus_bergylta
ENSHCOG00000002390	rpusd1	99	61.538	ENSLACG00000008869	RPUSD1	99	61.538	Latimeria_chalumnae
ENSHCOG00000002390	rpusd1	75	80.000	ENSLOCG00000005682	rpusd1	99	80.000	Lepisosteus_oculatus
ENSHCOG00000002390	rpusd1	99	57.576	ENSLAFG00000002115	RPUSD1	98	57.576	Loxodonta_africana
ENSHCOG00000002390	rpusd1	99	57.655	ENSMFAG00000003961	RPUSD1	79	77.670	Macaca_fascicularis
ENSHCOG00000002390	rpusd1	99	57.655	ENSMMUG00000000842	RPUSD1	79	77.670	Macaca_mulatta
ENSHCOG00000002390	rpusd1	99	57.655	ENSMNEG00000042712	RPUSD1	79	77.670	Macaca_nemestrina
ENSHCOG00000002390	rpusd1	99	57.655	ENSMLEG00000030591	RPUSD1	79	77.670	Mandrillus_leucophaeus
ENSHCOG00000002390	rpusd1	99	76.873	ENSMAMG00000004735	rpusd1	99	77.524	Mastacembelus_armatus
ENSHCOG00000002390	rpusd1	99	76.299	ENSMZEG00005003214	rpusd1	99	76.299	Maylandia_zebra
ENSHCOG00000002390	rpusd1	96	62.799	ENSMGAG00000005447	RPUSD1	98	62.799	Meleagris_gallopavo
ENSHCOG00000002390	rpusd1	88	57.480	ENSMAUG00000019998	Rpusd1	97	57.480	Mesocricetus_auratus
ENSHCOG00000002390	rpusd1	99	57.756	ENSMICG00000017561	RPUSD1	79	77.670	Microcebus_murinus
ENSHCOG00000002390	rpusd1	99	56.811	ENSMOCG00000014082	Rpusd1	98	57.096	Microtus_ochrogaster
ENSHCOG00000002390	rpusd1	99	77.113	ENSMMOG00000012569	rpusd1	99	77.817	Mola_mola
ENSHCOG00000002390	rpusd1	100	61.184	ENSMODG00000016882	RPUSD1	99	61.716	Monodelphis_domestica
ENSHCOG00000002390	rpusd1	99	77.199	ENSMALG00000017818	rpusd1	99	79.153	Monopterus_albus
ENSHCOG00000002390	rpusd1	99	57.807	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.807	Mus_caroli
ENSHCOG00000002390	rpusd1	99	57.426	ENSMUSG00000041199	Rpusd1	98	57.895	Mus_musculus
ENSHCOG00000002390	rpusd1	99	56.766	MGP_PahariEiJ_G0023562	Rpusd1	98	57.096	Mus_pahari
ENSHCOG00000002390	rpusd1	99	57.426	MGP_SPRETEiJ_G0022155	Rpusd1	98	57.895	Mus_spretus
ENSHCOG00000002390	rpusd1	99	56.229	ENSMPUG00000015897	RPUSD1	98	56.229	Mustela_putorius_furo
ENSHCOG00000002390	rpusd1	99	58.361	ENSMLUG00000001089	RPUSD1	98	58.689	Myotis_lucifugus
ENSHCOG00000002390	rpusd1	99	57.807	ENSNGAG00000003595	Rpusd1	98	57.807	Nannospalax_galili
ENSHCOG00000002390	rpusd1	99	74.351	ENSNBRG00000006457	rpusd1	99	76.431	Neolamprologus_brichardi
ENSHCOG00000002390	rpusd1	54	49.704	ENSNLEG00000008424	-	97	49.704	Nomascus_leucogenys
ENSHCOG00000002390	rpusd1	99	63.051	ENSMEUG00000016049	RPUSD1	98	63.051	Notamacropus_eugenii
ENSHCOG00000002390	rpusd1	99	53.401	ENSOPRG00000008340	RPUSD1	98	53.401	Ochotona_princeps
ENSHCOG00000002390	rpusd1	99	58.140	ENSODEG00000016945	RPUSD1	98	58.140	Octodon_degus
ENSHCOG00000002390	rpusd1	99	77.049	ENSONIG00000015672	rpusd1	99	77.049	Oreochromis_niloticus
ENSHCOG00000002390	rpusd1	99	71.812	ENSORLG00000013009	rpusd1	99	71.475	Oryzias_latipes
ENSHCOG00000002390	rpusd1	99	71.812	ENSORLG00020010382	rpusd1	99	70.820	Oryzias_latipes_hni
ENSHCOG00000002390	rpusd1	99	70.805	ENSORLG00015021354	rpusd1	99	70.492	Oryzias_latipes_hsok
ENSHCOG00000002390	rpusd1	99	72.054	ENSOMEG00000021426	rpusd1	99	72.607	Oryzias_melastigma
ENSHCOG00000002390	rpusd1	99	57.329	ENSOGAG00000003795	RPUSD1	98	57.843	Otolemur_garnettii
ENSHCOG00000002390	rpusd1	99	59.076	ENSOARG00000014254	RPUSD1	98	59.076	Ovis_aries
ENSHCOG00000002390	rpusd1	99	56.026	ENSPPAG00000034797	RPUSD1	98	57.190	Pan_paniscus
ENSHCOG00000002390	rpusd1	99	57.912	ENSPPRG00000012389	RPUSD1	98	57.912	Panthera_pardus
ENSHCOG00000002390	rpusd1	99	57.912	ENSPTIG00000008545	RPUSD1	78	75.728	Panthera_tigris_altaica
ENSHCOG00000002390	rpusd1	99	56.026	ENSPTRG00000007565	RPUSD1	98	57.190	Pan_troglodytes
ENSHCOG00000002390	rpusd1	99	57.655	ENSPANG00000024401	RPUSD1	79	77.670	Papio_anubis
ENSHCOG00000002390	rpusd1	100	68.954	ENSPKIG00000018890	rpusd1	91	68.954	Paramormyrops_kingsleyae
ENSHCOG00000002390	rpusd1	99	62.791	ENSPSIG00000013945	RPUSD1	99	62.791	Pelodiscus_sinensis
ENSHCOG00000002390	rpusd1	99	73.611	ENSPMGG00000014950	rpusd1	98	73.611	Periophthalmus_magnuspinnatus
ENSHCOG00000002390	rpusd1	99	57.143	ENSPEMG00000000497	Rpusd1	98	57.566	Peromyscus_maniculatus_bairdii
ENSHCOG00000002390	rpusd1	100	52.459	ENSPMAG00000001563	rpusd1	100	54.072	Petromyzon_marinus
ENSHCOG00000002390	rpusd1	99	62.791	ENSPCIG00000021216	-	93	62.752	Phascolarctos_cinereus
ENSHCOG00000002390	rpusd1	99	73.115	ENSPFOG00000007946	rpusd1	99	73.115	Poecilia_formosa
ENSHCOG00000002390	rpusd1	99	73.115	ENSPLAG00000011925	rpusd1	99	73.115	Poecilia_latipinna
ENSHCOG00000002390	rpusd1	99	73.115	ENSPMEG00000002910	rpusd1	99	73.115	Poecilia_mexicana
ENSHCOG00000002390	rpusd1	99	73.856	ENSPREG00000019851	rpusd1	99	73.856	Poecilia_reticulata
ENSHCOG00000002390	rpusd1	99	44.595	ENSPCAG00000002258	RPUSD1	98	44.595	Procavia_capensis
ENSHCOG00000002390	rpusd1	99	55.882	ENSPCOG00000022582	RPUSD1	86	71.681	Propithecus_coquereli
ENSHCOG00000002390	rpusd1	99	53.922	ENSPVAG00000013104	RPUSD1	98	53.922	Pteropus_vampyrus
ENSHCOG00000002390	rpusd1	99	78.799	ENSPNYG00000024076	rpusd1	99	78.799	Pundamilia_nyererei
ENSHCOG00000002390	rpusd1	99	64.041	ENSPNAG00000013806	rpusd1	99	64.041	Pygocentrus_nattereri
ENSHCOG00000002390	rpusd1	99	57.756	ENSRNOG00000023639	Rpusd1	98	58.224	Rattus_norvegicus
ENSHCOG00000002390	rpusd1	99	58.824	ENSRBIG00000030238	RPUSD1	98	59.150	Rhinopithecus_bieti
ENSHCOG00000002390	rpusd1	99	58.824	ENSRROG00000036663	RPUSD1	98	59.150	Rhinopithecus_roxellana
ENSHCOG00000002390	rpusd1	99	59.259	ENSSBOG00000033063	RPUSD1	98	59.259	Saimiri_boliviensis_boliviensis
ENSHCOG00000002390	rpusd1	99	63.423	ENSSHAG00000013500	RPUSD1	98	63.423	Sarcophilus_harrisii
ENSHCOG00000002390	rpusd1	99	71.429	ENSSFOG00015014394	rpusd1	99	71.429	Scleropages_formosus
ENSHCOG00000002390	rpusd1	99	73.377	ENSSMAG00000008045	rpusd1	92	76.144	Scophthalmus_maximus
ENSHCOG00000002390	rpusd1	92	84.091	ENSSDUG00000001829	rpusd1	96	80.065	Seriola_dumerili
ENSHCOG00000002390	rpusd1	92	84.091	ENSSLDG00000020853	rpusd1	96	80.065	Seriola_lalandi_dorsalis
ENSHCOG00000002390	rpusd1	57	69.880	ENSSARG00000011187	-	99	69.880	Sorex_araneus
ENSHCOG00000002390	rpusd1	62	53.968	ENSSPUG00000005119	-	98	55.615	Sphenodon_punctatus
ENSHCOG00000002390	rpusd1	99	78.105	ENSSPAG00000012708	rpusd1	99	78.105	Stegastes_partitus
ENSHCOG00000002390	rpusd1	99	57.516	ENSSSCG00000008000	RPUSD1	98	65.490	Sus_scrofa
ENSHCOG00000002390	rpusd1	88	69.048	ENSTGUG00000015375	RPUSD1	99	69.048	Taeniopygia_guttata
ENSHCOG00000002390	rpusd1	99	75.896	ENSTRUG00000003041	rpusd1	98	75.817	Takifugu_rubripes
ENSHCOG00000002390	rpusd1	99	76.056	ENSTNIG00000002660	rpusd1	99	76.056	Tetraodon_nigroviridis
ENSHCOG00000002390	rpusd1	99	57.843	ENSTTRG00000010167	RPUSD1	98	57.843	Tursiops_truncatus
ENSHCOG00000002390	rpusd1	99	56.902	ENSUAMG00000012736	RPUSD1	98	57.239	Ursus_americanus
ENSHCOG00000002390	rpusd1	99	57.239	ENSUMAG00000021174	RPUSD1	96	61.887	Ursus_maritimus
ENSHCOG00000002390	rpusd1	99	56.902	ENSVVUG00000012357	RPUSD1	98	56.902	Vulpes_vulpes
ENSHCOG00000002390	rpusd1	99	64.310	ENSXETG00000007184	rpusd1	98	64.310	Xenopus_tropicalis
ENSHCOG00000002390	rpusd1	99	73.000	ENSXCOG00000017930	rpusd1	99	73.000	Xiphophorus_couchianus
ENSHCOG00000002390	rpusd1	99	73.333	ENSXMAG00000024084	rpusd1	99	73.333	Xiphophorus_maculatus