EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002423 (Gene tree)
Gene ID: 109527154
Gene Symbol: rab11bb
Alias: zgc:92772
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 9014 bases
Position: chrKV880289.1:359205-368218
Accession: 109527154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018118	MMR_HSR1	PF01926.23	2.7e-07	1	1
ENSHCOP00000018103	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012086	-	1092	-	ENSHCOP00000018103	218 (aa)	-	-
ENSHCOT00000012070	-	1244	XM_019888892	ENSHCOP00000018118	218 (aa)	XP_019744451	UPI00094ED744

Gene Model

Click here to download ENSHCOG00000002423's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002423	rab11bb	74	43.210	ENSHCOG00000017086	RAB15	76	43.210
ENSHCOG00000002423	rab11bb	73	31.875	ENSHCOG00000013807	rheb	86	31.875
ENSHCOG00000002423	rab11bb	100	94.037	ENSHCOG00000000985	-	100	94.037
ENSHCOG00000002423	rab11bb	79	44.828	ENSHCOG00000003981	RAB39B	82	44.828
ENSHCOG00000002423	rab11bb	76	53.012	ENSHCOG00000010023	-	99	45.933
ENSHCOG00000002423	rab11bb	72	36.306	ENSHCOG00000013130	rab6bb	75	36.306
ENSHCOG00000002423	rab11bb	78	41.040	ENSHCOG00000009133	zgc:101559	73	41.040
ENSHCOG00000002423	rab11bb	98	64.186	ENSHCOG00000013095	rab25a	98	64.186
ENSHCOG00000002423	rab11bb	100	87.156	ENSHCOG00000005652	rab11a	100	87.156
ENSHCOG00000002423	rab11bb	94	36.190	ENSHCOG00000004225	-	97	36.190
ENSHCOG00000002423	rab11bb	94	38.537	ENSHCOG00000017123	-	93	38.537
ENSHCOG00000002423	rab11bb	80	45.763	ENSHCOG00000019732	-	83	45.763
ENSHCOG00000002423	rab11bb	73	31.677	ENSHCOG00000018554	rasd4	77	31.677
ENSHCOG00000002423	rab11bb	75	42.424	ENSHCOG00000012376	rab12	68	42.424
ENSHCOG00000002423	rab11bb	73	39.634	ENSHCOG00000016322	RAB7A	79	39.634
ENSHCOG00000002423	rab11bb	74	33.537	ENSHCOG00000018456	si:ch73-116o1.2	82	35.227
ENSHCOG00000002423	rab11bb	66	36.111	ENSHCOG00000013919	rab23	79	35.583
ENSHCOG00000002423	rab11bb	81	46.328	ENSHCOG00000007440	rab13	97	46.328
ENSHCOG00000002423	rab11bb	96	41.627	ENSHCOG00000020238	-	90	41.627
ENSHCOG00000002423	rab11bb	81	36.158	ENSHCOG00000004404	rab41	82	36.158
ENSHCOG00000002423	rab11bb	74	38.922	ENSHCOG00000004086	rab9a	82	38.922
ENSHCOG00000002423	rab11bb	96	45.283	ENSHCOG00000001137	rab1ab	99	45.755
ENSHCOG00000002423	rab11bb	96	41.148	ENSHCOG00000006538	si:dkey-16l2.16	98	41.148
ENSHCOG00000002423	rab11bb	74	31.214	ENSHCOG00000019709	rasl11a	70	31.214
ENSHCOG00000002423	rab11bb	65	30.986	ENSHCOG00000010468	arl8bb	72	30.986
ENSHCOG00000002423	rab11bb	91	44.608	ENSHCOG00000013180	-	95	44.608
ENSHCOG00000002423	rab11bb	54	30.894	ENSHCOG00000014829	-	60	30.894
ENSHCOG00000002423	rab11bb	94	33.488	ENSHCOG00000003569	rab33ba	89	33.488
ENSHCOG00000002423	rab11bb	85	37.368	ENSHCOG00000004726	rab33a	80	37.368
ENSHCOG00000002423	rab11bb	94	37.799	ENSHCOG00000005802	RAB9A	91	37.799
ENSHCOG00000002423	rab11bb	94	63.462	ENSHCOG00000007187	rab25b	85	63.462
ENSHCOG00000002423	rab11bb	95	35.023	ENSHCOG00000015692	si:dkey-34d22.5	97	35.023
ENSHCOG00000002423	rab11bb	66	42.667	ENSHCOG00000012834	-	67	40.127
ENSHCOG00000002423	rab11bb	70	34.839	ENSHCOG00000011080	kras	87	35.928
ENSHCOG00000002423	rab11bb	99	82.028	ENSHCOG00000000232	rab11al	99	82.028
ENSHCOG00000002423	rab11bb	70	39.216	ENSHCOG00000010707	rab30	83	39.216
ENSHCOG00000002423	rab11bb	74	42.236	ENSHCOG00000001145	rab22a	83	42.236
ENSHCOG00000002423	rab11bb	80	51.149	ENSHCOG00000019224	rab14	81	51.149
ENSHCOG00000002423	rab11bb	81	32.203	ENSHCOG00000014711	rab6ba	85	32.203
ENSHCOG00000002423	rab11bb	75	47.853	ENSHCOG00000004662	rab5c	87	41.667
ENSHCOG00000002423	rab11bb	96	45.933	ENSHCOG00000019468	rab1ba	99	45.933
ENSHCOG00000002423	rab11bb	75	41.667	ENSHCOG00000005024	rab9b	83	41.667
ENSHCOG00000002423	rab11bb	72	37.580	ENSHCOG00000006550	-	75	37.580
ENSHCOG00000002423	rab11bb	78	46.199	ENSHCOG00000002217	rab18b	83	46.199
ENSHCOG00000002423	rab11bb	94	31.401	ENSHCOG00000020527	rab34a	77	31.401
ENSHCOG00000002423	rab11bb	78	54.386	ENSHCOG00000014428	rab2a	99	47.393
ENSHCOG00000002423	rab11bb	100	94.954	ENSHCOG00000000954	-	100	94.954
ENSHCOG00000002423	rab11bb	72	33.544	ENSHCOG00000009757	ran	72	33.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002423	rab11bb	100	99.541	ENSAPOG00000023455	rab11bb	100	99.541	Acanthochromis_polyacanthus
ENSHCOG00000002423	rab11bb	100	98.165	ENSACIG00000024376	-	100	98.165	Amphilophus_citrinellus
ENSHCOG00000002423	rab11bb	100	86.697	ENSACIG00000019631	rab11bb	100	86.697	Amphilophus_citrinellus
ENSHCOG00000002423	rab11bb	100	98.165	ENSAOCG00000018849	-	100	98.165	Amphiprion_ocellaris
ENSHCOG00000002423	rab11bb	100	99.541	ENSAOCG00000018239	rab11bb	100	99.541	Amphiprion_ocellaris
ENSHCOG00000002423	rab11bb	100	99.541	ENSAPEG00000016590	rab11bb	100	99.541	Amphiprion_percula
ENSHCOG00000002423	rab11bb	100	99.541	ENSATEG00000017696	rab11bb	100	99.541	Anabas_testudineus
ENSHCOG00000002423	rab11bb	100	97.706	ENSATEG00000023725	-	100	97.706	Anabas_testudineus
ENSHCOG00000002423	rab11bb	94	98.544	ENSAPLG00000011046	-	94	98.544	Anas_platyrhynchos
ENSHCOG00000002423	rab11bb	100	99.541	ENSACLG00000007076	rab11bb	100	99.541	Astatotilapia_calliptera
ENSHCOG00000002423	rab11bb	100	98.165	ENSACLG00000005446	-	100	98.165	Astatotilapia_calliptera
ENSHCOG00000002423	rab11bb	100	99.083	ENSAMXG00000042655	rab11bb	100	99.083	Astyanax_mexicanus
ENSHCOG00000002423	rab11bb	100	97.248	ENSAMXG00000037623	-	100	97.248	Astyanax_mexicanus
ENSHCOG00000002423	rab11bb	100	96.789	ENSBTAG00000002475	RAB11B	100	96.789	Bos_taurus
ENSHCOG00000002423	rab11bb	96	95.215	ENSCHIG00000022426	-	92	97.073	Capra_hircus
ENSHCOG00000002423	rab11bb	100	96.789	ENSCATG00000029188	-	100	96.789	Cercocebus_atys
ENSHCOG00000002423	rab11bb	100	97.706	ENSCPBG00000017056	-	100	97.706	Chrysemys_picta_bellii
ENSHCOG00000002423	rab11bb	100	97.706	ENSCSEG00000007239	-	100	97.706	Cynoglossus_semilaevis
ENSHCOG00000002423	rab11bb	100	99.541	ENSCSEG00000012149	rab11bb	100	99.541	Cynoglossus_semilaevis
ENSHCOG00000002423	rab11bb	100	97.248	ENSCVAG00000019718	-	100	97.248	Cyprinodon_variegatus
ENSHCOG00000002423	rab11bb	100	99.541	ENSCVAG00000017021	-	100	99.541	Cyprinodon_variegatus
ENSHCOG00000002423	rab11bb	100	94.037	ENSCVAG00000019751	-	100	94.037	Cyprinodon_variegatus
ENSHCOG00000002423	rab11bb	100	98.624	ENSDARG00000090086	rab11bb	100	98.624	Danio_rerio
ENSHCOG00000002423	rab11bb	99	95.392	ENSETEG00000000905	-	99	95.392	Echinops_telfairi
ENSHCOG00000002423	rab11bb	99	95.349	ENSEASG00005003708	-	99	95.349	Equus_asinus_asinus
ENSHCOG00000002423	rab11bb	99	95.349	ENSECAG00000000716	RAB11B	99	95.349	Equus_caballus
ENSHCOG00000002423	rab11bb	100	96.789	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSHCOG00000002423	rab11bb	100	95.872	ENSELUG00000000916	-	100	95.872	Esox_lucius
ENSHCOG00000002423	rab11bb	100	98.624	ENSELUG00000021148	rab11bb	100	98.624	Esox_lucius
ENSHCOG00000002423	rab11bb	100	97.706	ENSFALG00000011828	-	100	97.706	Ficedula_albicollis
ENSHCOG00000002423	rab11bb	100	99.541	ENSFHEG00000018353	rab11bb	100	99.541	Fundulus_heteroclitus
ENSHCOG00000002423	rab11bb	100	97.706	ENSFHEG00000022676	-	100	97.706	Fundulus_heteroclitus
ENSHCOG00000002423	rab11bb	99	93.981	ENSGMOG00000009668	-	99	93.981	Gadus_morhua
ENSHCOG00000002423	rab11bb	100	99.083	ENSGMOG00000009211	rab11bb	100	99.083	Gadus_morhua
ENSHCOG00000002423	rab11bb	100	97.706	ENSGALG00000000613	RAB11B	100	97.706	Gallus_gallus
ENSHCOG00000002423	rab11bb	100	99.541	ENSGAFG00000007102	rab11bb	100	99.541	Gambusia_affinis
ENSHCOG00000002423	rab11bb	100	94.037	ENSGACG00000013297	-	99	94.037	Gasterosteus_aculeatus
ENSHCOG00000002423	rab11bb	100	99.083	ENSGACG00000015479	rab11bb	100	99.083	Gasterosteus_aculeatus
ENSHCOG00000002423	rab11bb	100	96.789	ENSGGOG00000014516	RAB11B	100	96.789	Gorilla_gorilla
ENSHCOG00000002423	rab11bb	100	98.165	ENSHBUG00000009947	-	100	98.165	Haplochromis_burtoni
ENSHCOG00000002423	rab11bb	100	99.541	ENSHBUG00000014777	rab11bb	100	99.541	Haplochromis_burtoni
ENSHCOG00000002423	rab11bb	100	99.541	ENSIPUG00000019927	rab11bb	100	99.541	Ictalurus_punctatus
ENSHCOG00000002423	rab11bb	100	97.706	ENSIPUG00000025100	rab11b	100	97.706	Ictalurus_punctatus
ENSHCOG00000002423	rab11bb	100	99.541	ENSKMAG00000009033	rab11bb	100	99.541	Kryptolebias_marmoratus
ENSHCOG00000002423	rab11bb	100	98.165	ENSKMAG00000006170	-	100	98.165	Kryptolebias_marmoratus
ENSHCOG00000002423	rab11bb	100	99.083	ENSLBEG00000015248	rab11bb	100	99.083	Labrus_bergylta
ENSHCOG00000002423	rab11bb	100	97.248	ENSLBEG00000004172	-	100	97.248	Labrus_bergylta
ENSHCOG00000002423	rab11bb	100	89.908	ENSLBEG00000005981	-	100	89.908	Labrus_bergylta
ENSHCOG00000002423	rab11bb	100	97.706	ENSLACG00000016857	-	100	97.706	Latimeria_chalumnae
ENSHCOG00000002423	rab11bb	100	96.789	ENSMFAG00000003654	RAB11B	100	96.789	Macaca_fascicularis
ENSHCOG00000002423	rab11bb	100	96.789	ENSMLEG00000030601	-	100	96.789	Mandrillus_leucophaeus
ENSHCOG00000002423	rab11bb	100	97.248	ENSMAMG00000018533	-	100	97.248	Mastacembelus_armatus
ENSHCOG00000002423	rab11bb	100	99.083	ENSMAMG00000006378	rab11bb	100	99.083	Mastacembelus_armatus
ENSHCOG00000002423	rab11bb	100	98.165	ENSMZEG00005010975	-	100	98.165	Maylandia_zebra
ENSHCOG00000002423	rab11bb	100	99.541	ENSMZEG00005003352	rab11bb	100	99.541	Maylandia_zebra
ENSHCOG00000002423	rab11bb	100	96.789	ENSMICG00000034065	-	100	96.789	Microcebus_murinus
ENSHCOG00000002423	rab11bb	99	95.392	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSHCOG00000002423	rab11bb	94	99.512	ENSMMOG00000007917	rab11bb	100	99.512	Mola_mola
ENSHCOG00000002423	rab11bb	100	98.165	ENSMMOG00000001250	-	100	98.165	Mola_mola
ENSHCOG00000002423	rab11bb	100	97.706	ENSMODG00000003841	-	100	97.706	Monodelphis_domestica
ENSHCOG00000002423	rab11bb	100	99.541	ENSMALG00000022187	rab11bb	100	99.541	Monopterus_albus
ENSHCOG00000002423	rab11bb	94	88.406	ENSMLUG00000006677	-	100	88.406	Myotis_lucifugus
ENSHCOG00000002423	rab11bb	100	99.541	ENSNBRG00000000372	rab11bb	100	99.541	Neolamprologus_brichardi
ENSHCOG00000002423	rab11bb	100	98.165	ENSNBRG00000023885	-	100	98.165	Neolamprologus_brichardi
ENSHCOG00000002423	rab11bb	100	97.706	ENSMEUG00000003686	-	100	97.706	Notamacropus_eugenii
ENSHCOG00000002423	rab11bb	100	99.541	ENSONIG00000010435	rab11bb	100	99.541	Oreochromis_niloticus
ENSHCOG00000002423	rab11bb	100	98.165	ENSONIG00000002544	-	100	98.165	Oreochromis_niloticus
ENSHCOG00000002423	rab11bb	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSHCOG00000002423	rab11bb	99	96.313	ENSORLG00000015284	-	72	96.313	Oryzias_latipes
ENSHCOG00000002423	rab11bb	100	99.083	ENSORLG00000013938	rab11bb	100	99.083	Oryzias_latipes
ENSHCOG00000002423	rab11bb	99	96.313	ENSORLG00020020844	RAB11B	99	96.313	Oryzias_latipes_hni
ENSHCOG00000002423	rab11bb	100	99.083	ENSORLG00020019393	rab11bb	100	99.083	Oryzias_latipes_hni
ENSHCOG00000002423	rab11bb	100	99.083	ENSORLG00015020173	rab11bb	100	99.083	Oryzias_latipes_hsok
ENSHCOG00000002423	rab11bb	99	96.313	ENSORLG00015016999	RAB11B	99	96.313	Oryzias_latipes_hsok
ENSHCOG00000002423	rab11bb	100	97.248	ENSOMEG00000002562	-	100	97.248	Oryzias_melastigma
ENSHCOG00000002423	rab11bb	100	99.541	ENSOMEG00000017806	-	100	99.541	Oryzias_melastigma
ENSHCOG00000002423	rab11bb	100	96.789	ENSPPAG00000028589	-	100	96.789	Pan_paniscus
ENSHCOG00000002423	rab11bb	100	96.789	ENSPTRG00000010422	RAB11B	100	96.789	Pan_troglodytes
ENSHCOG00000002423	rab11bb	100	96.789	ENSPANG00000007765	-	100	96.789	Papio_anubis
ENSHCOG00000002423	rab11bb	98	96.729	ENSPKIG00000001389	-	69	96.729	Paramormyrops_kingsleyae
ENSHCOG00000002423	rab11bb	100	98.165	ENSPKIG00000011703	-	100	98.165	Paramormyrops_kingsleyae
ENSHCOG00000002423	rab11bb	100	98.624	ENSPKIG00000011640	rab11bb	100	98.624	Paramormyrops_kingsleyae
ENSHCOG00000002423	rab11bb	98	93.607	ENSPSIG00000010242	-	85	93.607	Pelodiscus_sinensis
ENSHCOG00000002423	rab11bb	100	97.248	ENSPMGG00000014333	-	100	97.248	Periophthalmus_magnuspinnatus
ENSHCOG00000002423	rab11bb	99	92.627	ENSPMGG00000014336	-	99	92.627	Periophthalmus_magnuspinnatus
ENSHCOG00000002423	rab11bb	100	99.541	ENSPMGG00000009435	rab11bb	100	99.541	Periophthalmus_magnuspinnatus
ENSHCOG00000002423	rab11bb	97	96.226	ENSPCIG00000020371	-	99	96.226	Phascolarctos_cinereus
ENSHCOG00000002423	rab11bb	100	99.541	ENSPFOG00000024114	-	100	99.541	Poecilia_formosa
ENSHCOG00000002423	rab11bb	100	98.165	ENSPFOG00000006224	-	100	98.165	Poecilia_formosa
ENSHCOG00000002423	rab11bb	100	99.541	ENSPLAG00000001598	rab11bb	100	99.541	Poecilia_latipinna
ENSHCOG00000002423	rab11bb	100	98.165	ENSPLAG00000014207	-	100	98.165	Poecilia_latipinna
ENSHCOG00000002423	rab11bb	100	98.165	ENSPMEG00000007842	-	100	98.165	Poecilia_mexicana
ENSHCOG00000002423	rab11bb	100	99.541	ENSPMEG00000012389	rab11bb	100	99.541	Poecilia_mexicana
ENSHCOG00000002423	rab11bb	100	99.541	ENSPREG00000014269	rab11bb	100	99.541	Poecilia_reticulata
ENSHCOG00000002423	rab11bb	100	97.706	ENSPREG00000006336	-	100	97.706	Poecilia_reticulata
ENSHCOG00000002423	rab11bb	100	98.165	ENSPNYG00000019611	-	100	98.165	Pundamilia_nyererei
ENSHCOG00000002423	rab11bb	100	99.541	ENSPNYG00000004098	rab11bb	100	99.541	Pundamilia_nyererei
ENSHCOG00000002423	rab11bb	100	96.789	ENSRROG00000037812	-	100	96.789	Rhinopithecus_roxellana
ENSHCOG00000002423	rab11bb	97	96.698	ENSSHAG00000006816	-	97	96.698	Sarcophilus_harrisii
ENSHCOG00000002423	rab11bb	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSHCOG00000002423	rab11bb	100	74.771	ENSSFOG00015006245	-	100	74.771	Scleropages_formosus
ENSHCOG00000002423	rab11bb	100	99.083	ENSSMAG00000004922	rab11bb	100	99.083	Scophthalmus_maximus
ENSHCOG00000002423	rab11bb	100	94.495	ENSSMAG00000018613	-	100	94.495	Scophthalmus_maximus
ENSHCOG00000002423	rab11bb	100	99.541	ENSSDUG00000013558	rab11bb	100	99.541	Seriola_dumerili
ENSHCOG00000002423	rab11bb	100	98.165	ENSSDUG00000002934	-	100	98.165	Seriola_dumerili
ENSHCOG00000002423	rab11bb	100	98.165	ENSSLDG00000005275	-	100	98.165	Seriola_lalandi_dorsalis
ENSHCOG00000002423	rab11bb	100	99.541	ENSSLDG00000020676	rab11bb	100	99.541	Seriola_lalandi_dorsalis
ENSHCOG00000002423	rab11bb	100	97.248	ENSSPUG00000002243	-	100	97.248	Sphenodon_punctatus
ENSHCOG00000002423	rab11bb	100	98.165	ENSSPAG00000014559	-	100	98.165	Stegastes_partitus
ENSHCOG00000002423	rab11bb	100	99.541	ENSSPAG00000011419	rab11bb	100	99.541	Stegastes_partitus
ENSHCOG00000002423	rab11bb	100	97.706	ENSTGUG00000000084	-	100	97.706	Taeniopygia_guttata
ENSHCOG00000002423	rab11bb	99	98.148	ENSTRUG00000021619	-	100	98.148	Takifugu_rubripes
ENSHCOG00000002423	rab11bb	99	94.470	ENSTRUG00000021614	-	99	94.470	Takifugu_rubripes
ENSHCOG00000002423	rab11bb	100	99.541	ENSTRUG00000022029	rab11bb	100	99.541	Takifugu_rubripes
ENSHCOG00000002423	rab11bb	100	98.165	ENSTNIG00000011081	rab11bb	100	98.165	Tetraodon_nigroviridis
ENSHCOG00000002423	rab11bb	93	96.059	ENSTNIG00000002003	-	100	96.059	Tetraodon_nigroviridis
ENSHCOG00000002423	rab11bb	99	94.009	ENSTNIG00000013184	-	99	94.009	Tetraodon_nigroviridis
ENSHCOG00000002423	rab11bb	99	98.148	ENSTNIG00000013182	-	100	98.148	Tetraodon_nigroviridis
ENSHCOG00000002423	rab11bb	94	97.561	ENSUAMG00000006639	-	100	96.602	Ursus_americanus
ENSHCOG00000002423	rab11bb	100	97.717	ENSXETG00000025484	rab11b.1	99	97.717	Xenopus_tropicalis
ENSHCOG00000002423	rab11bb	100	98.165	ENSXCOG00000009190	-	100	98.165	Xiphophorus_couchianus
ENSHCOG00000002423	rab11bb	100	99.541	ENSXCOG00000008042	-	100	99.541	Xiphophorus_couchianus
ENSHCOG00000002423	rab11bb	100	97.706	ENSXMAG00000024840	-	100	97.706	Xiphophorus_maculatus
ENSHCOG00000002423	rab11bb	100	99.541	ENSXMAG00000011926	rab11bb	100	99.541	Xiphophorus_maculatus