EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002434 (Gene tree)
Gene ID: 109521763
Gene Symbol: cwc25
Alias: ccdc49|fc11a02|flj20291l|im:7140273|pate|pte|wu:fc11a02|zgc:55552
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 8942 bases
Position: chrKV880113.1:95694-104635
Accession: 109521763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001475	CWC25	PF12542.8	2e-19	1	1
ENSHCOP00000018121	CWC25	PF12542.8	2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012047	-	1669	XM_019879831	ENSHCOP00000001475	400 (aa)	XP_019735390	UPI00094EACFA
ENSHCOT00000012043	-	1893	-	ENSHCOP00000018121	402 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000002434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002434	cwc25	100	79.156	ENSAPEG00000013237	cwc25	100	81.638	Amphiprion_percula
ENSHCOG00000002434	cwc25	100	77.667	ENSATEG00000000799	cwc25	100	78.856	Anabas_testudineus
ENSHCOG00000002434	cwc25	62	73.944	ENSANAG00000033550	CWC25	68	73.944	Aotus_nancymaae
ENSHCOG00000002434	cwc25	100	75.802	ENSACLG00000009352	cwc25	100	75.802	Astatotilapia_calliptera
ENSHCOG00000002434	cwc25	100	61.386	ENSAMXG00000035125	cwc25	100	61.139	Astyanax_mexicanus
ENSHCOG00000002434	cwc25	100	51.357	ENSBTAG00000030591	CWC25	86	73.944	Bos_taurus
ENSHCOG00000002434	cwc25	100	51.765	ENSCPOG00000015127	CWC25	100	51.054	Cavia_porcellus
ENSHCOG00000002434	cwc25	99	51.991	ENSCPBG00000027490	CWC25	88	51.288	Chrysemys_picta_bellii
ENSHCOG00000002434	cwc25	100	68.627	ENSCSEG00000016305	cwc25	100	67.157	Cynoglossus_semilaevis
ENSHCOG00000002434	cwc25	100	75.500	ENSCVAG00000007828	cwc25	100	75.500	Cyprinodon_variegatus
ENSHCOG00000002434	cwc25	100	65.842	ENSDARG00000003382	cwc25	100	64.444	Danio_rerio
ENSHCOG00000002434	cwc25	100	46.489	ENSEBUG00000002947	cwc25	82	61.268	Eptatretus_burgeri
ENSHCOG00000002434	cwc25	100	64.508	ENSELUG00000009127	cwc25	100	64.183	Esox_lucius
ENSHCOG00000002434	cwc25	100	74.194	ENSFHEG00000004754	cwc25	100	73.945	Fundulus_heteroclitus
ENSHCOG00000002434	cwc25	79	84.177	ENSGMOG00000013001	cwc25	77	84.337	Gadus_morhua
ENSHCOG00000002434	cwc25	100	50.455	ENSGALG00000001624	CWC25	100	49.654	Gallus_gallus
ENSHCOG00000002434	cwc25	100	74.000	ENSGAFG00000007492	cwc25	100	76.000	Gambusia_affinis
ENSHCOG00000002434	cwc25	100	65.957	ENSGACG00000018153	cwc25	100	66.432	Gasterosteus_aculeatus
ENSHCOG00000002434	cwc25	100	52.656	ENSGAGG00000022972	CWC25	100	51.501	Gopherus_agassizii
ENSHCOG00000002434	cwc25	100	75.309	ENSHBUG00000001392	cwc25	100	73.333	Haplochromis_burtoni
ENSHCOG00000002434	cwc25	100	63.119	ENSIPUG00000012581	CWC25	100	63.119	Ictalurus_punctatus
ENSHCOG00000002434	cwc25	100	76.427	ENSKMAG00000015418	cwc25	99	77.171	Kryptolebias_marmoratus
ENSHCOG00000002434	cwc25	84	46.857	ENSLACG00000001743	CWC25	100	45.906	Latimeria_chalumnae
ENSHCOG00000002434	cwc25	100	58.432	ENSLOCG00000013707	cwc25	100	56.532	Lepisosteus_oculatus
ENSHCOG00000002434	cwc25	100	76.750	ENSMAMG00000005194	cwc25	100	74.250	Mastacembelus_armatus
ENSHCOG00000002434	cwc25	100	75.802	ENSMZEG00005012421	cwc25	100	75.802	Maylandia_zebra
ENSHCOG00000002434	cwc25	99	51.740	ENSMGAG00000005158	CWC25	99	50.116	Meleagris_gallopavo
ENSHCOG00000002434	cwc25	100	76.284	ENSMALG00000005638	cwc25	100	75.000	Monopterus_albus
ENSHCOG00000002434	cwc25	100	52.459	MGP_CAROLIEiJ_G0017064	Cwc25	69	73.239	Mus_caroli
ENSHCOG00000002434	cwc25	100	54.292	MGP_PahariEiJ_G0018193	Cwc25	69	73.944	Mus_pahari
ENSHCOG00000002434	cwc25	100	75.309	ENSONIG00000003251	cwc25	100	76.049	Oreochromis_niloticus
ENSHCOG00000002434	cwc25	100	73.250	ENSORLG00000018569	cwc25	100	74.250	Oryzias_latipes
ENSHCOG00000002434	cwc25	100	69.500	ENSORLG00020012087	cwc25	100	72.250	Oryzias_latipes_hni
ENSHCOG00000002434	cwc25	100	74.250	ENSORLG00015011062	cwc25	100	73.500	Oryzias_latipes_hsok
ENSHCOG00000002434	cwc25	100	71.500	ENSOMEG00000019365	cwc25	100	68.000	Oryzias_melastigma
ENSHCOG00000002434	cwc25	100	51.597	ENSOGAG00000008785	CWC25	100	51.597	Otolemur_garnettii
ENSHCOG00000002434	cwc25	100	56.763	ENSPKIG00000007116	cwc25	100	58.853	Paramormyrops_kingsleyae
ENSHCOG00000002434	cwc25	100	74.250	ENSPFOG00000017152	cwc25	100	76.250	Poecilia_formosa
ENSHCOG00000002434	cwc25	96	72.917	ENSPLAG00000004535	cwc25	100	75.000	Poecilia_latipinna
ENSHCOG00000002434	cwc25	100	74.000	ENSPMEG00000023752	cwc25	100	76.000	Poecilia_mexicana
ENSHCOG00000002434	cwc25	100	63.614	ENSPNAG00000028668	cwc25	100	63.366	Pygocentrus_nattereri
ENSHCOG00000002434	cwc25	100	59.466	ENSSFOG00015003449	cwc25	100	57.767	Scleropages_formosus
ENSHCOG00000002434	cwc25	100	77.667	ENSSMAG00000010953	cwc25	100	77.916	Scophthalmus_maximus
ENSHCOG00000002434	cwc25	100	76.179	ENSSDUG00000004302	cwc25	100	81.638	Seriola_dumerili
ENSHCOG00000002434	cwc25	100	75.186	ENSSLDG00000005761	cwc25	100	80.645	Seriola_lalandi_dorsalis
ENSHCOG00000002434	cwc25	100	73.317	ENSTRUG00000004650	cwc25	100	70.823	Takifugu_rubripes
ENSHCOG00000002434	cwc25	100	68.750	ENSTNIG00000014143	cwc25	100	68.828	Tetraodon_nigroviridis
ENSHCOG00000002434	cwc25	72	75.000	ENSTBEG00000013187	CWC25	64	75.000	Tupaia_belangeri
ENSHCOG00000002434	cwc25	71	75.472	ENSVPAG00000005680	CWC25	66	75.472	Vicugna_pacos
ENSHCOG00000002434	cwc25	99	58.000	ENSXETG00000023722	cwc25	100	55.392	Xenopus_tropicalis
ENSHCOG00000002434	cwc25	100	73.000	ENSXMAG00000018113	cwc25	100	73.750	Xiphophorus_maculatus