EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002445 (Gene tree)
Gene ID: 109513253
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 24048 bases
Position: chrKV879857.1:201089-225136
Accession: 109513253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018100	ResIII	PF04851.15	3.3e-08	1	1
ENSHCOP00000018117	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000012074	-	5665	XM_019865555	ENSHCOP00000018117	1543 (aa)	XP_019721114	UPI00094F0027
ENSHCOT00000012100	-	3120	-	ENSHCOP00000018100	1039 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000002445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002445	ino80	97	74.081	ENSG00000128908	INO80	93	81.319	Homo_sapiens
ENSHCOG00000002445	ino80	93	85.761	ENSAPOG00000012586	ino80	99	81.866	Acanthochromis_polyacanthus
ENSHCOG00000002445	ino80	96	74.356	ENSAMEG00000016796	INO80	98	73.394	Ailuropoda_melanoleuca
ENSHCOG00000002445	ino80	93	84.250	ENSACIG00000001918	ino80	95	83.216	Amphilophus_citrinellus
ENSHCOG00000002445	ino80	99	86.223	ENSAOCG00000000490	ino80	99	85.861	Amphiprion_ocellaris
ENSHCOG00000002445	ino80	99	86.223	ENSAPEG00000022911	ino80	99	85.861	Amphiprion_percula
ENSHCOG00000002445	ino80	99	85.723	ENSATEG00000001271	ino80	99	85.450	Anabas_testudineus
ENSHCOG00000002445	ino80	97	73.819	ENSAPLG00000013656	INO80	98	72.564	Anas_platyrhynchos
ENSHCOG00000002445	ino80	92	73.384	ENSACAG00000003531	INO80	99	72.816	Anolis_carolinensis
ENSHCOG00000002445	ino80	97	73.853	ENSANAG00000032223	INO80	98	72.780	Aotus_nancymaae
ENSHCOG00000002445	ino80	94	79.358	ENSACLG00000006610	ino80	96	80.374	Astatotilapia_calliptera
ENSHCOG00000002445	ino80	96	73.847	ENSBTAG00000010380	INO80	97	73.195	Bos_taurus
ENSHCOG00000002445	ino80	97	73.836	ENSCJAG00000020770	-	98	72.762	Callithrix_jacchus
ENSHCOG00000002445	ino80	96	74.008	ENSCAFG00000009492	INO80	98	73.312	Canis_familiaris
ENSHCOG00000002445	ino80	92	75.297	ENSCAFG00020005524	-	98	71.000	Canis_lupus_dingo
ENSHCOG00000002445	ino80	96	74.157	ENSCHIG00000010246	INO80	97	73.499	Capra_hircus
ENSHCOG00000002445	ino80	96	74.586	ENSTSYG00000003252	INO80	98	73.489	Carlito_syrichta
ENSHCOG00000002445	ino80	96	73.991	ENSCPOG00000011386	INO80	98	73.489	Cavia_porcellus
ENSHCOG00000002445	ino80	97	73.902	ENSCCAG00000030680	INO80	98	72.827	Cebus_capucinus
ENSHCOG00000002445	ino80	97	73.885	ENSCATG00000040663	INO80	98	72.809	Cercocebus_atys
ENSHCOG00000002445	ino80	96	73.974	ENSCLAG00000008397	INO80	98	73.342	Chinchilla_lanigera
ENSHCOG00000002445	ino80	97	74.016	ENSCSAG00000007632	INO80	98	72.938	Chlorocebus_sabaeus
ENSHCOG00000002445	ino80	63	76.627	ENSCHOG00000011938	INO80	76	76.627	Choloepus_hoffmanni
ENSHCOG00000002445	ino80	97	73.543	ENSCPBG00000013491	INO80	98	72.564	Chrysemys_picta_bellii
ENSHCOG00000002445	ino80	97	69.494	ENSCANG00000036208	INO80	98	68.431	Colobus_angolensis_palliatus
ENSHCOG00000002445	ino80	96	73.858	ENSCGRG00001013566	Ino80	97	73.753	Cricetulus_griseus_chok1gshd
ENSHCOG00000002445	ino80	96	73.858	ENSCGRG00000001290	Ino80	97	73.753	Cricetulus_griseus_crigri
ENSHCOG00000002445	ino80	91	79.624	ENSCSEG00000019370	ino80	95	79.764	Cynoglossus_semilaevis
ENSHCOG00000002445	ino80	98	83.420	ENSCVAG00000021470	ino80	99	82.462	Cyprinodon_variegatus
ENSHCOG00000002445	ino80	99	77.728	ENSDARG00000070432	ino80	99	76.508	Danio_rerio
ENSHCOG00000002445	ino80	96	74.719	ENSDNOG00000010267	INO80	98	73.489	Dasypus_novemcinctus
ENSHCOG00000002445	ino80	64	73.543	ENSEBUG00000001921	ino80	96	62.704	Eptatretus_burgeri
ENSHCOG00000002445	ino80	96	74.091	ENSEASG00005016405	INO80	98	73.264	Equus_asinus_asinus
ENSHCOG00000002445	ino80	91	78.197	ENSELUG00000001071	ino80	93	78.596	Esox_lucius
ENSHCOG00000002445	ino80	96	74.157	ENSFCAG00000014722	INO80	98	73.329	Felis_catus
ENSHCOG00000002445	ino80	97	73.333	ENSFALG00000006125	INO80	91	73.775	Ficedula_albicollis
ENSHCOG00000002445	ino80	96	73.280	ENSFDAG00000005624	INO80	98	72.987	Fukomys_damarensis
ENSHCOG00000002445	ino80	80	89.781	ENSFHEG00000020436	ino80	88	83.469	Fundulus_heteroclitus
ENSHCOG00000002445	ino80	94	78.897	ENSGMOG00000006031	ino80	99	80.318	Gadus_morhua
ENSHCOG00000002445	ino80	97	73.819	ENSGALG00000008553	INO80	98	72.372	Gallus_gallus
ENSHCOG00000002445	ino80	99	82.595	ENSGAFG00000006358	ino80	99	82.537	Gambusia_affinis
ENSHCOG00000002445	ino80	99	83.081	ENSGACG00000012960	ino80	99	82.761	Gasterosteus_aculeatus
ENSHCOG00000002445	ino80	94	73.463	ENSGAGG00000019203	INO80	94	73.154	Gopherus_agassizii
ENSHCOG00000002445	ino80	93	84.399	ENSHBUG00000022614	ino80	95	84.011	Haplochromis_burtoni
ENSHCOG00000002445	ino80	96	73.461	ENSHGLG00000018136	INO80	98	72.969	Heterocephalus_glaber_female
ENSHCOG00000002445	ino80	92	74.919	ENSHGLG00100006571	INO80	90	74.228	Heterocephalus_glaber_male
ENSHCOG00000002445	ino80	94	76.856	ENSIPUG00000018905	ino80	95	77.954	Ictalurus_punctatus
ENSHCOG00000002445	ino80	96	73.743	ENSSTOG00000000427	INO80	98	73.117	Ictidomys_tridecemlineatus
ENSHCOG00000002445	ino80	96	69.695	ENSJJAG00000016166	Ino80	97	68.685	Jaculus_jaculus
ENSHCOG00000002445	ino80	98	76.980	ENSKMAG00000019273	ino80	94	82.514	Kryptolebias_marmoratus
ENSHCOG00000002445	ino80	94	80.234	ENSLBEG00000024288	ino80	98	82.218	Labrus_bergylta
ENSHCOG00000002445	ino80	99	66.945	ENSLACG00000008666	INO80	99	65.918	Latimeria_chalumnae
ENSHCOG00000002445	ino80	99	77.270	ENSLOCG00000012304	ino80	99	77.270	Lepisosteus_oculatus
ENSHCOG00000002445	ino80	96	74.371	ENSLAFG00000009951	INO80	98	73.277	Loxodonta_africana
ENSHCOG00000002445	ino80	97	74.016	ENSMFAG00000044488	INO80	98	72.938	Macaca_fascicularis
ENSHCOG00000002445	ino80	97	74.016	ENSMMUG00000001737	INO80	98	72.938	Macaca_mulatta
ENSHCOG00000002445	ino80	97	74.016	ENSMNEG00000034906	INO80	98	72.938	Macaca_nemestrina
ENSHCOG00000002445	ino80	97	74.016	ENSMLEG00000042117	INO80	98	72.938	Mandrillus_leucophaeus
ENSHCOG00000002445	ino80	95	77.682	ENSMAMG00000013786	ino80	99	74.638	Mastacembelus_armatus
ENSHCOG00000002445	ino80	94	84.706	ENSMZEG00005013146	ino80	96	83.726	Maylandia_zebra
ENSHCOG00000002445	ino80	94	75.189	ENSMGAG00000011164	INO80	99	73.799	Meleagris_gallopavo
ENSHCOG00000002445	ino80	96	72.469	ENSMAUG00000020670	Ino80	97	72.638	Mesocricetus_auratus
ENSHCOG00000002445	ino80	96	73.925	ENSMICG00000005801	INO80	98	72.840	Microcebus_murinus
ENSHCOG00000002445	ino80	96	74.172	ENSMOCG00000016879	Ino80	98	73.489	Microtus_ochrogaster
ENSHCOG00000002445	ino80	98	74.130	ENSMMOG00000015046	ino80	99	75.549	Mola_mola
ENSHCOG00000002445	ino80	96	74.536	ENSMODG00000000184	INO80	98	73.040	Monodelphis_domestica
ENSHCOG00000002445	ino80	98	76.289	ENSMALG00000016488	ino80	94	81.786	Monopterus_albus
ENSHCOG00000002445	ino80	96	71.818	MGP_CAROLIEiJ_G0024144	Ino80	97	71.990	Mus_caroli
ENSHCOG00000002445	ino80	96	73.925	ENSMUSG00000034154	Ino80	97	74.081	Mus_musculus
ENSHCOG00000002445	ino80	96	73.792	MGP_PahariEiJ_G0025587	Ino80	98	73.554	Mus_pahari
ENSHCOG00000002445	ino80	96	73.991	MGP_SPRETEiJ_G0025060	Ino80	97	74.081	Mus_spretus
ENSHCOG00000002445	ino80	96	74.223	ENSMPUG00000008786	INO80	98	73.459	Mustela_putorius_furo
ENSHCOG00000002445	ino80	96	73.816	ENSMLUG00000017764	INO80	98	72.868	Myotis_lucifugus
ENSHCOG00000002445	ino80	96	73.910	ENSNGAG00000019497	Ino80	98	73.346	Nannospalax_galili
ENSHCOG00000002445	ino80	91	78.541	ENSNBRG00000022086	ino80	95	78.541	Neolamprologus_brichardi
ENSHCOG00000002445	ino80	97	72.280	ENSNLEG00000003454	INO80	98	71.236	Nomascus_leucogenys
ENSHCOG00000002445	ino80	86	62.162	ENSOPRG00000000831	INO80	75	63.877	Ochotona_princeps
ENSHCOG00000002445	ino80	96	73.858	ENSODEG00000016734	INO80	98	73.294	Octodon_degus
ENSHCOG00000002445	ino80	99	84.942	ENSONIG00000000772	ino80	99	84.674	Oreochromis_niloticus
ENSHCOG00000002445	ino80	96	74.388	ENSOCUG00000010763	INO80	98	73.424	Oryctolagus_cuniculus
ENSHCOG00000002445	ino80	99	79.653	ENSORLG00000018028	ino80	99	79.846	Oryzias_latipes
ENSHCOG00000002445	ino80	99	79.782	ENSORLG00015012507	ino80	99	79.782	Oryzias_latipes_hsok
ENSHCOG00000002445	ino80	99	80.205	ENSOMEG00000003791	ino80	99	80.269	Oryzias_melastigma
ENSHCOG00000002445	ino80	96	74.702	ENSOGAG00000008998	INO80	98	73.602	Otolemur_garnettii
ENSHCOG00000002445	ino80	96	73.698	ENSOARG00000020323	INO80	97	73.112	Ovis_aries
ENSHCOG00000002445	ino80	97	74.147	ENSPPAG00000042104	INO80	98	73.067	Pan_paniscus
ENSHCOG00000002445	ino80	96	74.223	ENSPPRG00000011011	INO80	98	73.394	Panthera_pardus
ENSHCOG00000002445	ino80	96	73.959	ENSPTIG00000005911	INO80	98	73.134	Panthera_tigris_altaica
ENSHCOG00000002445	ino80	97	74.147	ENSPTRG00000006939	INO80	98	73.067	Pan_troglodytes
ENSHCOG00000002445	ino80	97	74.016	ENSPANG00000019131	INO80	98	72.938	Papio_anubis
ENSHCOG00000002445	ino80	92	78.982	ENSPKIG00000021450	ino80	98	79.175	Paramormyrops_kingsleyae
ENSHCOG00000002445	ino80	97	73.429	ENSPSIG00000014403	INO80	97	72.833	Pelodiscus_sinensis
ENSHCOG00000002445	ino80	92	74.434	ENSPEMG00000013114	-	99	71.466	Peromyscus_maniculatus_bairdii
ENSHCOG00000002445	ino80	96	74.536	ENSPCIG00000027848	INO80	98	73.040	Phascolarctos_cinereus
ENSHCOG00000002445	ino80	98	82.143	ENSPFOG00000013082	ino80	99	81.274	Poecilia_formosa
ENSHCOG00000002445	ino80	82	79.689	ENSPMEG00000021422	ino80	86	82.632	Poecilia_mexicana
ENSHCOG00000002445	ino80	94	83.208	ENSPREG00000013650	ino80	94	83.509	Poecilia_reticulata
ENSHCOG00000002445	ino80	96	72.366	ENSPPYG00000006368	INO80	98	71.438	Pongo_abelii
ENSHCOG00000002445	ino80	97	72.751	ENSPCOG00000022332	INO80	97	72.554	Propithecus_coquereli
ENSHCOG00000002445	ino80	96	71.836	ENSPVAG00000001852	INO80	98	71.113	Pteropus_vampyrus
ENSHCOG00000002445	ino80	92	85.294	ENSPNYG00000002995	ino80	95	80.777	Pundamilia_nyererei
ENSHCOG00000002445	ino80	99	79.567	ENSPNAG00000010386	ino80	99	78.662	Pygocentrus_nattereri
ENSHCOG00000002445	ino80	96	73.527	ENSRNOG00000014483	Ino80	97	73.688	Rattus_norvegicus
ENSHCOG00000002445	ino80	97	74.016	ENSRBIG00000031765	INO80	98	72.938	Rhinopithecus_bieti
ENSHCOG00000002445	ino80	97	74.016	ENSRROG00000033143	INO80	98	72.938	Rhinopithecus_roxellana
ENSHCOG00000002445	ino80	95	75.986	ENSSBOG00000023493	INO80	98	74.707	Saimiri_boliviensis_boliviensis
ENSHCOG00000002445	ino80	96	74.536	ENSSHAG00000016349	INO80	98	73.040	Sarcophilus_harrisii
ENSHCOG00000002445	ino80	98	77.959	ENSSFOG00015000183	ino80	99	77.763	Scleropages_formosus
ENSHCOG00000002445	ino80	99	86.026	ENSSMAG00000007221	ino80	99	85.551	Scophthalmus_maximus
ENSHCOG00000002445	ino80	99	86.358	ENSSDUG00000009957	ino80	99	85.996	Seriola_dumerili
ENSHCOG00000002445	ino80	99	83.679	ENSSLDG00000000389	ino80	89	82.901	Seriola_lalandi_dorsalis
ENSHCOG00000002445	ino80	96	71.381	ENSSARG00000007876	INO80	97	70.539	Sorex_araneus
ENSHCOG00000002445	ino80	90	84.848	ENSSPAG00000007779	ino80	94	81.564	Stegastes_partitus
ENSHCOG00000002445	ino80	96	73.781	ENSSSCG00000004753	INO80	98	74.147	Sus_scrofa
ENSHCOG00000002445	ino80	99	72.698	ENSTGUG00000010786	INO80	91	73.379	Taeniopygia_guttata
ENSHCOG00000002445	ino80	94	83.842	ENSTRUG00000013026	ino80	98	84.250	Takifugu_rubripes
ENSHCOG00000002445	ino80	96	72.830	ENSTTRG00000011479	INO80	98	71.893	Tursiops_truncatus
ENSHCOG00000002445	ino80	92	75.297	ENSUMAG00000012190	-	99	71.129	Ursus_maritimus
ENSHCOG00000002445	ino80	96	68.390	ENSVPAG00000002838	INO80	98	67.469	Vicugna_pacos
ENSHCOG00000002445	ino80	96	74.074	ENSVVUG00000026698	INO80	98	73.377	Vulpes_vulpes
ENSHCOG00000002445	ino80	98	63.736	ENSXETG00000034272	INO80	91	65.344	Xenopus_tropicalis
ENSHCOG00000002445	ino80	94	83.151	ENSXMAG00000006742	ino80	93	83.029	Xiphophorus_maculatus