EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002518 (Gene tree)
Gene ID: 109513749
Gene Symbol: -
Alias: -
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4376 bases
Position: chrKV879869.1:1297816-1302191
Accession: 109513749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001541	RRM_1	PF00076.22	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011927	-	1464	XM_019866384	ENSHCOP00000001541	272 (aa)	XP_019721943	UPI00094F0AC2

Gene Model

Click here to download ENSHCOG00000002518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002518	-	89	35.857	ENSG00000278023	RDM1	95	41.985	Homo_sapiens
ENSHCOG00000002518	-	69	56.842	ENSAPOG00000021886	zgc:103564	74	56.842	Acanthochromis_polyacanthus
ENSHCOG00000002518	-	94	53.488	ENSAPEG00000008929	zgc:103564	97	53.101	Amphiprion_percula
ENSHCOG00000002518	-	79	38.565	ENSAPLG00000004384	RDM1	91	35.743	Anas_platyrhynchos
ENSHCOG00000002518	-	98	36.101	ENSACAG00000012989	-	91	37.109	Anolis_carolinensis
ENSHCOG00000002518	-	89	37.795	ENSANAG00000032752	RDM1	94	43.182	Aotus_nancymaae
ENSHCOG00000002518	-	98	35.540	ENSBTAG00000000030	RDM1	99	34.843	Bos_taurus
ENSHCOG00000002518	-	89	37.154	ENSCJAG00000015031	RDM1	94	43.939	Callithrix_jacchus
ENSHCOG00000002518	-	84	36.134	ENSCAFG00000015160	-	93	35.294	Canis_familiaris
ENSHCOG00000002518	-	93	36.531	ENSCHIG00000020607	RDM1	99	34.843	Capra_hircus
ENSHCOG00000002518	-	90	34.524	ENSCPOG00000001495	-	87	35.317	Cavia_porcellus
ENSHCOG00000002518	-	89	36.759	ENSCCAG00000035763	RDM1	94	42.424	Cebus_capucinus
ENSHCOG00000002518	-	97	35.689	ENSCATG00000044451	RDM1	94	43.939	Cercocebus_atys
ENSHCOG00000002518	-	87	35.827	ENSCSAG00000006209	RDM1	96	35.827	Chlorocebus_sabaeus
ENSHCOG00000002518	-	78	37.615	ENSCPBG00000009105	RDM1	91	36.820	Chrysemys_picta_bellii
ENSHCOG00000002518	-	89	37.154	ENSCANG00000041322	RDM1	86	47.115	Colobus_angolensis_palliatus
ENSHCOG00000002518	-	89	38.710	ENSCGRG00001015927	Rdm1	88	38.710	Cricetulus_griseus_chok1gshd
ENSHCOG00000002518	-	90	59.839	ENSCVAG00000001956	zgc:103564	99	58.029	Cyprinodon_variegatus
ENSHCOG00000002518	-	79	36.937	ENSDNOG00000045224	-	82	35.586	Dasypus_novemcinctus
ENSHCOG00000002518	-	71	39.109	ENSEASG00005010554	RDM1	72	37.624	Equus_asinus_asinus
ENSHCOG00000002518	-	97	37.184	ENSECAG00000022182	RDM1	98	36.232	Equus_caballus
ENSHCOG00000002518	-	78	38.073	ENSEEUG00000006127	RDM1	86	37.615	Erinaceus_europaeus
ENSHCOG00000002518	-	82	37.719	ENSFCAG00000043429	RDM1	94	44.697	Felis_catus
ENSHCOG00000002518	-	97	39.552	ENSGALG00000000243	RDM1	97	38.163	Gallus_gallus
ENSHCOG00000002518	-	82	36.364	ENSGAGG00000000293	-	79	35.714	Gopherus_agassizii
ENSHCOG00000002518	-	89	35.857	ENSGGOG00000010584	RDM1	94	41.985	Gorilla_gorilla
ENSHCOG00000002518	-	85	37.131	ENSSTOG00000022491	RDM1	82	37.131	Ictidomys_tridecemlineatus
ENSHCOG00000002518	-	91	37.358	ENSLAFG00000029300	RDM1	93	36.226	Loxodonta_africana
ENSHCOG00000002518	-	97	35.689	ENSMFAG00000032968	RDM1	94	43.939	Macaca_fascicularis
ENSHCOG00000002518	-	97	35.689	ENSMMUG00000006847	RDM1	99	35.689	Macaca_mulatta
ENSHCOG00000002518	-	97	35.689	ENSMNEG00000039977	RDM1	94	43.939	Macaca_nemestrina
ENSHCOG00000002518	-	97	35.336	ENSMLEG00000041158	RDM1	99	35.336	Mandrillus_leucophaeus
ENSHCOG00000002518	-	93	36.576	ENSMGAG00000008774	RDM1	94	37.759	Meleagris_gallopavo
ENSHCOG00000002518	-	97	35.484	ENSMAUG00000018559	Rdm1	99	35.484	Mesocricetus_auratus
ENSHCOG00000002518	-	97	35.461	ENSMICG00000038651	RDM1	99	34.397	Microcebus_murinus
ENSHCOG00000002518	-	88	37.037	ENSMOCG00000015095	Rdm1	89	37.037	Microtus_ochrogaster
ENSHCOG00000002518	-	85	37.288	ENSMODG00000011101	RDM1	86	37.288	Monodelphis_domestica
ENSHCOG00000002518	-	89	35.341	MGP_CAROLIEiJ_G0017226	Rdm1	98	33.574	Mus_caroli
ENSHCOG00000002518	-	89	35.743	ENSMUSG00000010362	Rdm1	98	34.050	Mus_musculus
ENSHCOG00000002518	-	99	34.050	MGP_PahariEiJ_G0018356	Rdm1	98	33.935	Mus_pahari
ENSHCOG00000002518	-	89	35.081	MGP_SPRETEiJ_G0018069	Rdm1	98	33.333	Mus_spretus
ENSHCOG00000002518	-	83	38.298	ENSMPUG00000008363	RDM1	83	36.820	Mustela_putorius_furo
ENSHCOG00000002518	-	90	36.111	ENSNLEG00000014173	RDM1	87	45.098	Nomascus_leucogenys
ENSHCOG00000002518	-	85	37.179	ENSMEUG00000015826	RDM1	94	36.752	Notamacropus_eugenii
ENSHCOG00000002518	-	91	39.300	ENSOCUG00000022704	RDM1	98	39.300	Oryctolagus_cuniculus
ENSHCOG00000002518	-	83	38.095	ENSOGAG00000011332	RDM1	81	37.229	Otolemur_garnettii
ENSHCOG00000002518	-	89	36.255	ENSPPAG00000029969	RDM1	88	36.255	Pan_paniscus
ENSHCOG00000002518	-	89	36.255	ENSPTRG00000009031	RDM1	94	42.424	Pan_troglodytes
ENSHCOG00000002518	-	97	35.689	ENSPANG00000022933	RDM1	94	43.939	Papio_anubis
ENSHCOG00000002518	-	90	36.653	ENSPEMG00000018985	Rdm1	89	36.653	Peromyscus_maniculatus_bairdii
ENSHCOG00000002518	-	89	35.600	ENSPPYG00000008198	RDM1	88	35.600	Pongo_abelii
ENSHCOG00000002518	-	97	34.386	ENSPCOG00000017995	RDM1	94	43.182	Propithecus_coquereli
ENSHCOG00000002518	-	82	37.662	ENSPVAG00000001116	RDM1	91	37.662	Pteropus_vampyrus
ENSHCOG00000002518	-	90	35.857	ENSRNOG00000020751	Rdm1	88	35.857	Rattus_norvegicus
ENSHCOG00000002518	-	89	37.450	ENSRBIG00000030000	RDM1	94	43.939	Rhinopithecus_bieti
ENSHCOG00000002518	-	89	37.450	ENSRROG00000035242	RDM1	99	34.982	Rhinopithecus_roxellana
ENSHCOG00000002518	-	85	39.744	ENSSHAG00000013584	RDM1	85	39.744	Sarcophilus_harrisii
ENSHCOG00000002518	-	89	36.400	ENSSPUG00000010941	RDM1	91	36.111	Sphenodon_punctatus
ENSHCOG00000002518	-	99	56.777	ENSSPAG00000011690	-	99	56.777	Stegastes_partitus
ENSHCOG00000002518	-	79	30.909	ENSSSCG00000017574	-	92	30.275	Sus_scrofa
ENSHCOG00000002518	-	83	37.500	ENSUAMG00000027279	RDM1	88	37.302	Ursus_americanus
ENSHCOG00000002518	-	83	37.500	ENSUMAG00000015423	RDM1	87	37.302	Ursus_maritimus