EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002774 (Gene tree)
Gene ID: 109519802
Gene Symbol: polr1e
Alias: zgc:112501
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 7889 bases
Position: chrKV880079.1:87875-95763
Accession: 109519802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001753	RNA_pol_I_A49	PF06870.12	3.1e-108	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011568	-	3806	XM_019876553	ENSHCOP00000001753	414 (aa)	XP_019732112	UPI00094F22DE

Gene Model

Click here to download ENSHCOG00000002774's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002774's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002774	polr1e	98	44.363	ENSG00000137054	POLR1E	97	44.118	Homo_sapiens
ENSHCOG00000002774	polr1e	100	67.067	ENSAPOG00000012452	polr1e	100	67.067	Acanthochromis_polyacanthus
ENSHCOG00000002774	polr1e	98	40.749	ENSAMEG00000010193	POLR1E	81	60.000	Ailuropoda_melanoleuca
ENSHCOG00000002774	polr1e	100	63.095	ENSACIG00000009884	polr1e	99	67.775	Amphilophus_citrinellus
ENSHCOG00000002774	polr1e	100	72.596	ENSAOCG00000005665	polr1e	100	72.596	Amphiprion_ocellaris
ENSHCOG00000002774	polr1e	100	73.077	ENSAPEG00000020581	polr1e	100	73.077	Amphiprion_percula
ENSHCOG00000002774	polr1e	100	74.519	ENSATEG00000020609	polr1e	100	74.519	Anabas_testudineus
ENSHCOG00000002774	polr1e	81	38.442	ENSAPLG00000010340	POLR1E	100	37.403	Anas_platyrhynchos
ENSHCOG00000002774	polr1e	99	43.961	ENSANAG00000038046	POLR1E	98	43.961	Aotus_nancymaae
ENSHCOG00000002774	polr1e	100	70.673	ENSACLG00000013685	polr1e	99	70.673	Astatotilapia_calliptera
ENSHCOG00000002774	polr1e	99	55.556	ENSAMXG00000018181	polr1e	99	55.556	Astyanax_mexicanus
ENSHCOG00000002774	polr1e	98	45.343	ENSBTAG00000012243	POLR1E	97	45.098	Bos_taurus
ENSHCOG00000002774	polr1e	94	42.025	ENSCJAG00000010512	POLR1E	93	45.161	Callithrix_jacchus
ENSHCOG00000002774	polr1e	99	43.720	ENSCAFG00000002377	POLR1E	98	43.237	Canis_familiaris
ENSHCOG00000002774	polr1e	99	43.961	ENSCAFG00020017851	POLR1E	98	43.478	Canis_lupus_dingo
ENSHCOG00000002774	polr1e	98	44.118	ENSCHIG00000019479	POLR1E	97	44.118	Capra_hircus
ENSHCOG00000002774	polr1e	99	43.720	ENSTSYG00000002075	POLR1E	98	43.237	Carlito_syrichta
ENSHCOG00000002774	polr1e	69	41.319	ENSCAPG00000015653	POLR1E	99	41.319	Cavia_aperea
ENSHCOG00000002774	polr1e	98	45.098	ENSCPOG00000009965	POLR1E	97	45.098	Cavia_porcellus
ENSHCOG00000002774	polr1e	98	40.244	ENSCCAG00000029460	POLR1E	98	40.244	Cebus_capucinus
ENSHCOG00000002774	polr1e	98	44.363	ENSCATG00000031732	POLR1E	96	55.000	Cercocebus_atys
ENSHCOG00000002774	polr1e	86	46.685	ENSCLAG00000012701	POLR1E	95	45.856	Chinchilla_lanigera
ENSHCOG00000002774	polr1e	98	44.608	ENSCSAG00000010782	POLR1E	97	44.363	Chlorocebus_sabaeus
ENSHCOG00000002774	polr1e	94	37.468	ENSCHOG00000013024	POLR1E	82	37.468	Choloepus_hoffmanni
ENSHCOG00000002774	polr1e	99	45.803	ENSCPBG00000006923	POLR1E	99	45.564	Chrysemys_picta_bellii
ENSHCOG00000002774	polr1e	98	44.608	ENSCANG00000036112	POLR1E	96	55.882	Colobus_angolensis_palliatus
ENSHCOG00000002774	polr1e	99	42.892	ENSCGRG00001006197	Polr1e	95	42.651	Cricetulus_griseus_chok1gshd
ENSHCOG00000002774	polr1e	99	42.410	ENSCGRG00000006430	Polr1e	95	42.169	Cricetulus_griseus_crigri
ENSHCOG00000002774	polr1e	99	65.459	ENSCSEG00000005121	polr1e	99	65.217	Cynoglossus_semilaevis
ENSHCOG00000002774	polr1e	100	67.952	ENSCVAG00000019759	polr1e	100	67.711	Cyprinodon_variegatus
ENSHCOG00000002774	polr1e	97	56.079	ENSDARG00000006434	polr1e	100	55.904	Danio_rerio
ENSHCOG00000002774	polr1e	99	39.490	ENSDNOG00000010257	POLR1E	98	36.403	Dasypus_novemcinctus
ENSHCOG00000002774	polr1e	85	41.504	ENSETEG00000018204	POLR1E	99	41.504	Echinops_telfairi
ENSHCOG00000002774	polr1e	99	44.928	ENSEASG00005000675	POLR1E	98	44.203	Equus_asinus_asinus
ENSHCOG00000002774	polr1e	99	44.928	ENSECAG00000014669	POLR1E	98	44.203	Equus_caballus
ENSHCOG00000002774	polr1e	94	36.709	ENSEEUG00000011928	POLR1E	83	36.709	Erinaceus_europaeus
ENSHCOG00000002774	polr1e	99	62.560	ENSELUG00000008150	polr1e	99	62.560	Esox_lucius
ENSHCOG00000002774	polr1e	99	45.301	ENSFCAG00000013081	POLR1E	98	44.819	Felis_catus
ENSHCOG00000002774	polr1e	95	44.584	ENSFALG00000012950	POLR1E	99	44.584	Ficedula_albicollis
ENSHCOG00000002774	polr1e	98	45.343	ENSFDAG00000016917	POLR1E	97	44.853	Fukomys_damarensis
ENSHCOG00000002774	polr1e	100	66.827	ENSFHEG00000009801	polr1e	100	66.827	Fundulus_heteroclitus
ENSHCOG00000002774	polr1e	99	53.589	ENSGMOG00000003336	POLR1E	99	53.589	Gadus_morhua
ENSHCOG00000002774	polr1e	98	43.796	ENSGALG00000005395	POLR1E	98	43.796	Gallus_gallus
ENSHCOG00000002774	polr1e	100	67.952	ENSGAFG00000004850	polr1e	100	67.952	Gambusia_affinis
ENSHCOG00000002774	polr1e	100	66.110	ENSGACG00000016087	polr1e	100	66.110	Gasterosteus_aculeatus
ENSHCOG00000002774	polr1e	97	40.988	ENSGAGG00000001659	POLR1E	99	40.723	Gopherus_agassizii
ENSHCOG00000002774	polr1e	99	43.885	ENSGGOG00000001882	POLR1E	99	52.294	Gorilla_gorilla
ENSHCOG00000002774	polr1e	100	70.913	ENSHBUG00000002559	polr1e	99	70.913	Haplochromis_burtoni
ENSHCOG00000002774	polr1e	98	45.343	ENSHGLG00000002036	POLR1E	97	45.343	Heterocephalus_glaber_female
ENSHCOG00000002774	polr1e	98	45.588	ENSHGLG00100012784	POLR1E	97	45.588	Heterocephalus_glaber_male
ENSHCOG00000002774	polr1e	99	52.174	ENSIPUG00000003019	polr1e	99	52.174	Ictalurus_punctatus
ENSHCOG00000002774	polr1e	99	44.686	ENSSTOG00000009810	POLR1E	99	43.961	Ictidomys_tridecemlineatus
ENSHCOG00000002774	polr1e	98	45.343	ENSJJAG00000020731	Polr1e	93	45.343	Jaculus_jaculus
ENSHCOG00000002774	polr1e	100	68.990	ENSKMAG00000000046	polr1e	100	68.990	Kryptolebias_marmoratus
ENSHCOG00000002774	polr1e	99	71.084	ENSLBEG00000003104	polr1e	99	71.084	Labrus_bergylta
ENSHCOG00000002774	polr1e	86	47.107	ENSLACG00000003416	POLR1E	99	47.107	Latimeria_chalumnae
ENSHCOG00000002774	polr1e	99	51.074	ENSLOCG00000012859	polr1e	99	50.835	Lepisosteus_oculatus
ENSHCOG00000002774	polr1e	99	44.686	ENSLAFG00000012831	POLR1E	98	44.686	Loxodonta_africana
ENSHCOG00000002774	polr1e	98	44.363	ENSMFAG00000045465	POLR1E	96	55.000	Macaca_fascicularis
ENSHCOG00000002774	polr1e	98	44.363	ENSMMUG00000017892	POLR1E	96	55.000	Macaca_mulatta
ENSHCOG00000002774	polr1e	98	40.670	ENSMNEG00000040283	POLR1E	90	52.632	Macaca_nemestrina
ENSHCOG00000002774	polr1e	98	44.363	ENSMLEG00000031135	POLR1E	96	55.000	Mandrillus_leucophaeus
ENSHCOG00000002774	polr1e	99	70.361	ENSMAMG00000001260	polr1e	99	70.120	Mastacembelus_armatus
ENSHCOG00000002774	polr1e	100	70.913	ENSMZEG00005021536	polr1e	99	70.913	Maylandia_zebra
ENSHCOG00000002774	polr1e	98	43.627	ENSMAUG00000021044	Polr1e	93	43.382	Mesocricetus_auratus
ENSHCOG00000002774	polr1e	99	45.169	ENSMICG00000003673	POLR1E	98	44.928	Microcebus_murinus
ENSHCOG00000002774	polr1e	98	43.415	ENSMOCG00000012920	Polr1e	94	43.032	Microtus_ochrogaster
ENSHCOG00000002774	polr1e	100	72.182	ENSMMOG00000007391	polr1e	100	72.182	Mola_mola
ENSHCOG00000002774	polr1e	96	44.554	ENSMODG00000002884	POLR1E	98	44.030	Monodelphis_domestica
ENSHCOG00000002774	polr1e	100	73.317	ENSMALG00000002665	polr1e	99	73.317	Monopterus_albus
ENSHCOG00000002774	polr1e	99	40.821	MGP_CAROLIEiJ_G0025967	Polr1e	97	40.759	Mus_caroli
ENSHCOG00000002774	polr1e	99	41.446	ENSMUSG00000028318	Polr1e	97	40.909	Mus_musculus
ENSHCOG00000002774	polr1e	99	42.892	MGP_PahariEiJ_G0024114	Polr1e	97	42.424	Mus_pahari
ENSHCOG00000002774	polr1e	99	41.687	MGP_SPRETEiJ_G0026930	Polr1e	97	41.162	Mus_spretus
ENSHCOG00000002774	polr1e	98	40.175	ENSMPUG00000006040	POLR1E	82	59.000	Mustela_putorius_furo
ENSHCOG00000002774	polr1e	99	44.686	ENSMLUG00000012688	POLR1E	95	44.203	Myotis_lucifugus
ENSHCOG00000002774	polr1e	98	44.118	ENSNGAG00000002520	Polr1e	93	44.118	Nannospalax_galili
ENSHCOG00000002774	polr1e	100	71.154	ENSNBRG00000016822	polr1e	99	71.154	Neolamprologus_brichardi
ENSHCOG00000002774	polr1e	98	44.363	ENSNLEG00000003616	POLR1E	96	55.000	Nomascus_leucogenys
ENSHCOG00000002774	polr1e	72	49.776	ENSMEUG00000015372	-	79	49.776	Notamacropus_eugenii
ENSHCOG00000002774	polr1e	86	39.722	ENSOPRG00000014206	POLR1E	99	38.889	Ochotona_princeps
ENSHCOG00000002774	polr1e	98	44.853	ENSODEG00000014565	POLR1E	94	44.118	Octodon_degus
ENSHCOG00000002774	polr1e	100	71.635	ENSONIG00000008921	polr1e	99	71.635	Oreochromis_niloticus
ENSHCOG00000002774	polr1e	99	44.444	ENSOCUG00000024773	POLR1E	98	43.961	Oryctolagus_cuniculus
ENSHCOG00000002774	polr1e	100	66.587	ENSORLG00000005143	polr1e	100	66.587	Oryzias_latipes
ENSHCOG00000002774	polr1e	93	63.636	ENSORLG00020007271	polr1e	99	63.377	Oryzias_latipes_hni
ENSHCOG00000002774	polr1e	100	66.346	ENSORLG00015000137	polr1e	100	66.346	Oryzias_latipes_hsok
ENSHCOG00000002774	polr1e	100	66.346	ENSOMEG00000013264	polr1e	98	65.865	Oryzias_melastigma
ENSHCOG00000002774	polr1e	99	44.578	ENSOGAG00000012981	POLR1E	96	43.720	Otolemur_garnettii
ENSHCOG00000002774	polr1e	98	44.608	ENSOARG00000011465	POLR1E	93	44.608	Ovis_aries
ENSHCOG00000002774	polr1e	98	44.363	ENSPPAG00000034566	POLR1E	96	55.000	Pan_paniscus
ENSHCOG00000002774	polr1e	99	45.060	ENSPPRG00000005649	POLR1E	98	44.819	Panthera_pardus
ENSHCOG00000002774	polr1e	99	45.060	ENSPTIG00000009774	POLR1E	98	44.819	Panthera_tigris_altaica
ENSHCOG00000002774	polr1e	98	44.363	ENSPTRG00000020944	POLR1E	96	55.000	Pan_troglodytes
ENSHCOG00000002774	polr1e	98	44.363	ENSPANG00000025563	POLR1E	96	55.000	Papio_anubis
ENSHCOG00000002774	polr1e	99	57.007	ENSPKIG00000003562	polr1e	99	57.007	Paramormyrops_kingsleyae
ENSHCOG00000002774	polr1e	98	42.054	ENSPSIG00000003274	POLR1E	95	42.298	Pelodiscus_sinensis
ENSHCOG00000002774	polr1e	95	62.278	ENSPMGG00000024169	polr1e	96	62.278	Periophthalmus_magnuspinnatus
ENSHCOG00000002774	polr1e	99	37.317	ENSPEMG00000022300	-	94	37.317	Peromyscus_maniculatus_bairdii
ENSHCOG00000002774	polr1e	99	43.478	ENSPEMG00000019151	-	95	43.237	Peromyscus_maniculatus_bairdii
ENSHCOG00000002774	polr1e	99	45.433	ENSPCIG00000014798	POLR1E	99	44.928	Phascolarctos_cinereus
ENSHCOG00000002774	polr1e	100	64.626	ENSPFOG00000019627	polr1e	99	64.626	Poecilia_formosa
ENSHCOG00000002774	polr1e	100	68.916	ENSPLAG00000022679	polr1e	100	68.916	Poecilia_latipinna
ENSHCOG00000002774	polr1e	86	69.081	ENSPMEG00000022123	polr1e	93	69.081	Poecilia_mexicana
ENSHCOG00000002774	polr1e	100	67.229	ENSPREG00000009470	polr1e	100	67.229	Poecilia_reticulata
ENSHCOG00000002774	polr1e	98	44.853	ENSPPYG00000019061	POLR1E	97	44.608	Pongo_abelii
ENSHCOG00000002774	polr1e	51	40.284	ENSPCAG00000004891	POLR1E	69	40.284	Procavia_capensis
ENSHCOG00000002774	polr1e	99	44.444	ENSPCOG00000027448	POLR1E	98	44.203	Propithecus_coquereli
ENSHCOG00000002774	polr1e	96	43.890	ENSPVAG00000007940	POLR1E	84	43.890	Pteropus_vampyrus
ENSHCOG00000002774	polr1e	100	70.913	ENSPNYG00000001032	polr1e	99	70.913	Pundamilia_nyererei
ENSHCOG00000002774	polr1e	100	54.808	ENSPNAG00000006987	polr1e	100	54.808	Pygocentrus_nattereri
ENSHCOG00000002774	polr1e	98	42.157	ENSRNOG00000012664	Polr1e	93	41.912	Rattus_norvegicus
ENSHCOG00000002774	polr1e	95	44.110	ENSRBIG00000034214	POLR1E	99	44.619	Rhinopithecus_bieti
ENSHCOG00000002774	polr1e	98	44.363	ENSRROG00000031986	POLR1E	96	55.000	Rhinopithecus_roxellana
ENSHCOG00000002774	polr1e	98	43.627	ENSSBOG00000021415	POLR1E	97	43.627	Saimiri_boliviensis_boliviensis
ENSHCOG00000002774	polr1e	82	44.348	ENSSHAG00000016084	POLR1E	95	44.058	Sarcophilus_harrisii
ENSHCOG00000002774	polr1e	99	56.802	ENSSFOG00015002293	polr1e	99	56.563	Scleropages_formosus
ENSHCOG00000002774	polr1e	99	72.705	ENSSMAG00000011672	polr1e	93	72.705	Scophthalmus_maximus
ENSHCOG00000002774	polr1e	100	73.558	ENSSDUG00000022279	polr1e	99	72.837	Seriola_dumerili
ENSHCOG00000002774	polr1e	100	72.837	ENSSLDG00000024918	polr1e	99	72.115	Seriola_lalandi_dorsalis
ENSHCOG00000002774	polr1e	56	39.485	ENSSARG00000009810	-	58	39.485	Sorex_araneus
ENSHCOG00000002774	polr1e	95	43.073	ENSSPUG00000009499	POLR1E	95	43.073	Sphenodon_punctatus
ENSHCOG00000002774	polr1e	100	74.699	ENSSPAG00000021240	polr1e	100	74.458	Stegastes_partitus
ENSHCOG00000002774	polr1e	99	43.478	ENSSSCG00000005347	POLR1E	98	43.237	Sus_scrofa
ENSHCOG00000002774	polr1e	95	38.393	ENSTGUG00000007169	POLR1E	85	50.562	Taeniopygia_guttata
ENSHCOG00000002774	polr1e	99	66.746	ENSTRUG00000020779	polr1e	99	66.746	Takifugu_rubripes
ENSHCOG00000002774	polr1e	99	69.231	ENSTNIG00000017812	polr1e	99	69.231	Tetraodon_nigroviridis
ENSHCOG00000002774	polr1e	94	45.823	ENSTBEG00000013786	POLR1E	83	45.823	Tupaia_belangeri
ENSHCOG00000002774	polr1e	94	44.361	ENSTTRG00000008294	POLR1E	84	43.719	Tursiops_truncatus
ENSHCOG00000002774	polr1e	99	45.169	ENSUAMG00000012474	POLR1E	96	46.761	Ursus_americanus
ENSHCOG00000002774	polr1e	99	45.169	ENSUMAG00000011496	POLR1E	98	44.444	Ursus_maritimus
ENSHCOG00000002774	polr1e	81	41.176	ENSVPAG00000009048	POLR1E	80	40.588	Vicugna_pacos
ENSHCOG00000002774	polr1e	98	44.363	ENSVVUG00000019954	POLR1E	97	43.873	Vulpes_vulpes
ENSHCOG00000002774	polr1e	99	40.521	ENSXETG00000006533	polr1e	99	40.521	Xenopus_tropicalis
ENSHCOG00000002774	polr1e	100	66.425	ENSXCOG00000013706	polr1e	100	66.184	Xiphophorus_couchianus
ENSHCOG00000002774	polr1e	100	69.639	ENSXMAG00000012484	polr1e	100	69.639	Xiphophorus_maculatus