EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002807 (Gene tree)
Gene ID: 109510394
Gene Symbol: eif5b
Alias: im:6912504|si:ch211-254d18.3
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 12879 bases
Position: chrKV880530.1:1223312-1236190
Accession: 109510394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001771	IF-2	PF11987.8	2.6e-18	1	1
ENSHCOP00000001771	GTP_EFTU	PF00009.27	2.8e-34	1	1
ENSHCOP00000001771	MMR_HSR1	PF01926.23	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011531	-	4324	XM_019860679	ENSHCOP00000001771	1195 (aa)	XP_019716238	UPI00094E8398

Gene Model

Click here to download ENSHCOG00000002807's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002807	eif5b	83	82.860	ENSAPOG00000004375	eif5b	100	79.402	Acanthochromis_polyacanthus
ENSHCOG00000002807	eif5b	83	78.538	ENSACIG00000024324	eif5b	81	84.988	Amphilophus_citrinellus
ENSHCOG00000002807	eif5b	100	78.987	ENSAOCG00000018386	eif5b	100	79.734	Amphiprion_ocellaris
ENSHCOG00000002807	eif5b	74	82.692	ENSATEG00000011259	eif5b	87	82.579	Anabas_testudineus
ENSHCOG00000002807	eif5b	50	93.367	ENSATEG00000011451	-	62	93.367	Anabas_testudineus
ENSHCOG00000002807	eif5b	100	80.049	ENSATEG00000006765	eif5b	98	81.301	Anabas_testudineus
ENSHCOG00000002807	eif5b	100	67.045	ENSACAG00000008305	-	52	86.817	Anolis_carolinensis
ENSHCOG00000002807	eif5b	74	79.322	ENSACLG00000005530	eif5b	87	79.103	Astatotilapia_calliptera
ENSHCOG00000002807	eif5b	83	78.235	ENSAMXG00000018383	eif5b	97	72.982	Astyanax_mexicanus
ENSHCOG00000002807	eif5b	52	57.556	WBGene00021857	iffb-1	58	57.556	Caenorhabditis_elegans
ENSHCOG00000002807	eif5b	99	63.076	ENSCAPG00000014619	-	73	72.135	Cavia_aperea
ENSHCOG00000002807	eif5b	100	66.506	ENSCPOG00000011967	-	72	76.490	Cavia_porcellus
ENSHCOG00000002807	eif5b	57	63.796	ENSCHOG00000002137	-	55	79.493	Choloepus_hoffmanni
ENSHCOG00000002807	eif5b	51	63.312	ENSCSAVG00000008808	-	66	63.312	Ciona_savignyi
ENSHCOG00000002807	eif5b	52	90.997	ENSCSEG00000014153	eif5b	100	75.700	Cynoglossus_semilaevis
ENSHCOG00000002807	eif5b	100	77.087	ENSCVAG00000019619	eif5b	100	78.051	Cyprinodon_variegatus
ENSHCOG00000002807	eif5b	100	71.476	ENSDARG00000016548	eif5b	95	71.837	Danio_rerio
ENSHCOG00000002807	eif5b	51	69.821	FBgn0026259	eIF5B	54	69.821	Drosophila_melanogaster
ENSHCOG00000002807	eif5b	82	89.499	ENSELUG00000001132	eif5b	58	89.499	Esox_lucius
ENSHCOG00000002807	eif5b	52	90.499	ENSGACG00000010536	eif5b	85	90.499	Gasterosteus_aculeatus
ENSHCOG00000002807	eif5b	52	87.460	ENSGAGG00000022242	-	92	87.460	Gopherus_agassizii
ENSHCOG00000002807	eif5b	100	79.074	ENSHBUG00000023319	eif5b	100	79.851	Haplochromis_burtoni
ENSHCOG00000002807	eif5b	100	73.366	ENSIPUG00000020910	eif5b	100	73.306	Ictalurus_punctatus
ENSHCOG00000002807	eif5b	100	78.081	ENSKMAG00000004325	eif5b	100	79.735	Kryptolebias_marmoratus
ENSHCOG00000002807	eif5b	89	76.759	ENSLBEG00000027090	eif5b	99	78.033	Labrus_bergylta
ENSHCOG00000002807	eif5b	100	79.409	ENSMAMG00000022568	eif5b	100	80.690	Mastacembelus_armatus
ENSHCOG00000002807	eif5b	100	79.008	ENSMZEG00005012696	eif5b	100	79.785	Maylandia_zebra
ENSHCOG00000002807	eif5b	90	67.366	ENSMODG00000001387	-	52	86.977	Monodelphis_domestica
ENSHCOG00000002807	eif5b	100	79.290	ENSMALG00000005862	eif5b	100	79.950	Monopterus_albus
ENSHCOG00000002807	eif5b	79	86.364	ENSMEUG00000007080	-	62	86.364	Notamacropus_eugenii
ENSHCOG00000002807	eif5b	100	78.660	ENSONIG00000018749	eif5b	100	79.538	Oreochromis_niloticus
ENSHCOG00000002807	eif5b	99	63.584	ENSOANG00000004621	-	53	86.817	Ornithorhynchus_anatinus
ENSHCOG00000002807	eif5b	52	86.817	ENSOCUG00000021154	-	51	86.817	Oryctolagus_cuniculus
ENSHCOG00000002807	eif5b	100	77.178	ENSORLG00000001525	eif5b	100	77.925	Oryzias_latipes
ENSHCOG00000002807	eif5b	100	77.159	ENSORLG00020005327	eif5b	100	77.907	Oryzias_latipes_hni
ENSHCOG00000002807	eif5b	100	77.076	ENSORLG00015008949	eif5b	100	77.575	Oryzias_latipes_hsok
ENSHCOG00000002807	eif5b	67	83.940	ENSOMEG00000016539	eif5b	99	83.689	Oryzias_melastigma
ENSHCOG00000002807	eif5b	100	70.425	ENSPKIG00000011133	eif5b	73	81.635	Paramormyrops_kingsleyae
ENSHCOG00000002807	eif5b	58	77.305	ENSPSIG00000014914	-	57	88.889	Pelodiscus_sinensis
ENSHCOG00000002807	eif5b	75	65.632	ENSPMAG00000004508	eif5b	52	75.080	Petromyzon_marinus
ENSHCOG00000002807	eif5b	62	86.874	ENSPFOG00000007543	eif5b	99	87.009	Poecilia_formosa
ENSHCOG00000002807	eif5b	52	92.765	ENSPLAG00000015913	eif5b	100	78.808	Poecilia_latipinna
ENSHCOG00000002807	eif5b	100	77.465	ENSPMEG00000006712	eif5b	100	79.139	Poecilia_mexicana
ENSHCOG00000002807	eif5b	66	70.463	ENSPCAG00000007829	-	65	69.674	Procavia_capensis
ENSHCOG00000002807	eif5b	96	64.454	ENSPCOG00000019508	-	99	86.452	Propithecus_coquereli
ENSHCOG00000002807	eif5b	92	82.751	ENSPNYG00000021051	eif5b	89	80.635	Pundamilia_nyererei
ENSHCOG00000002807	eif5b	74	82.095	ENSPNAG00000023852	eif5b	100	72.431	Pygocentrus_nattereri
ENSHCOG00000002807	eif5b	54	88.199	ENSSFOG00015000594	eif5b	78	79.624	Scleropages_formosus
ENSHCOG00000002807	eif5b	87	74.237	ENSSMAG00000000045	eif5b	81	81.221	Scophthalmus_maximus
ENSHCOG00000002807	eif5b	75	82.071	ENSSDUG00000005847	eif5b	82	85.562	Seriola_dumerili
ENSHCOG00000002807	eif5b	75	81.465	ENSSLDG00000013738	eif5b	83	85.444	Seriola_lalandi_dorsalis
ENSHCOG00000002807	eif5b	81	86.817	ENSSPAG00000005335	eif5b	77	86.817	Stegastes_partitus
ENSHCOG00000002807	eif5b	69	80.535	ENSTRUG00000007772	eif5b	82	80.494	Takifugu_rubripes
ENSHCOG00000002807	eif5b	76	75.780	ENSTNIG00000006580	eif5b	95	79.291	Tetraodon_nigroviridis
ENSHCOG00000002807	eif5b	100	63.287	ENSXETG00000019377	eif5b	64	86.495	Xenopus_tropicalis
ENSHCOG00000002807	eif5b	74	81.172	ENSXCOG00000016681	eif5b	94	80.947	Xiphophorus_couchianus
ENSHCOG00000002807	eif5b	77	80.283	ENSXMAG00000001002	eif5b	94	81.130	Xiphophorus_maculatus