EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002840 (Gene tree)
Gene ID: -
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 6464 bases
Position: chrKV880215.1:625614-632077
Accession: 109523914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018336	TUDOR	PF00567.24	2e-83	1	3
ENSHCOP00000018336	TUDOR	PF00567.24	2e-83	2	3
ENSHCOP00000018336	TUDOR	PF00567.24	2e-83	3	3
ENSHCOP00000018319	TUDOR	PF00567.24	7.4e-81	1	3
ENSHCOP00000018319	TUDOR	PF00567.24	7.4e-81	2	3
ENSHCOP00000018319	TUDOR	PF00567.24	7.4e-81	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011547	-	2691	-	ENSHCOP00000018336	896 (aa)	-	-
ENSHCOT00000011575	-	2691	XM_019883386	ENSHCOP00000018319	896 (aa)	XP_019738945	-

Gene Model

Click here to download ENSHCOG00000002840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002840	tdrd1	74	33.333	ENSHCOG00000019950	tdrd6	58	33.333
ENSHCOG00000002840	tdrd1	72	32.484	ENSHCOG00000017328	-	69	32.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002840	tdrd1	91	30.826	ENSG00000095627	TDRD1	88	30.703	Homo_sapiens
ENSHCOG00000002840	tdrd1	99	50.323	ENSAPOG00000023199	tdrd1	99	50.452	Acanthochromis_polyacanthus
ENSHCOG00000002840	tdrd1	90	31.633	ENSAMEG00000015182	TDRD1	87	31.512	Ailuropoda_melanoleuca
ENSHCOG00000002840	tdrd1	93	45.434	ENSACIG00000010576	tdrd1	91	45.195	Amphilophus_citrinellus
ENSHCOG00000002840	tdrd1	90	58.722	ENSAOCG00000007059	tdrd1	99	47.990	Amphiprion_ocellaris
ENSHCOG00000002840	tdrd1	90	49.552	ENSAPEG00000017049	tdrd1	98	49.808	Amphiprion_percula
ENSHCOG00000002840	tdrd1	93	46.970	ENSATEG00000021627	tdrd1	93	46.970	Anabas_testudineus
ENSHCOG00000002840	tdrd1	81	31.918	ENSAPLG00000012609	TDRD1	95	30.559	Anas_platyrhynchos
ENSHCOG00000002840	tdrd1	91	31.538	ENSANAG00000035710	TDRD1	85	31.538	Aotus_nancymaae
ENSHCOG00000002840	tdrd1	95	46.449	ENSACLG00000014107	tdrd1	94	46.449	Astatotilapia_calliptera
ENSHCOG00000002840	tdrd1	99	39.431	ENSAMXG00000015146	tdrd1	99	39.555	Astyanax_mexicanus
ENSHCOG00000002840	tdrd1	86	30.844	ENSBTAG00000006855	TDRD1	81	31.189	Bos_taurus
ENSHCOG00000002840	tdrd1	84	32.867	ENSCJAG00000019270	TDRD1	82	32.727	Callithrix_jacchus
ENSHCOG00000002840	tdrd1	81	31.856	ENSCAFG00000011266	TDRD1	82	32.630	Canis_familiaris
ENSHCOG00000002840	tdrd1	81	32.486	ENSCAFG00020012373	TDRD1	82	31.505	Canis_lupus_dingo
ENSHCOG00000002840	tdrd1	83	31.906	ENSCHIG00000012766	TDRD1	81	32.263	Capra_hircus
ENSHCOG00000002840	tdrd1	90	33.333	ENSTSYG00000004935	TDRD1	86	33.333	Carlito_syrichta
ENSHCOG00000002840	tdrd1	84	30.583	ENSCPOG00000004190	TDRD1	82	30.583	Cavia_porcellus
ENSHCOG00000002840	tdrd1	91	30.986	ENSCCAG00000027375	TDRD1	86	30.986	Cebus_capucinus
ENSHCOG00000002840	tdrd1	93	31.432	ENSCATG00000035999	TDRD1	89	32.349	Cercocebus_atys
ENSHCOG00000002840	tdrd1	82	31.586	ENSCLAG00000003935	TDRD1	80	31.586	Chinchilla_lanigera
ENSHCOG00000002840	tdrd1	91	31.305	ENSCSAG00000005071	TDRD1	87	31.179	Chlorocebus_sabaeus
ENSHCOG00000002840	tdrd1	78	43.411	ENSCHOG00000001690	TDRD1	64	43.411	Choloepus_hoffmanni
ENSHCOG00000002840	tdrd1	83	32.633	ENSCPBG00000003780	TDRD1	82	33.092	Chrysemys_picta_bellii
ENSHCOG00000002840	tdrd1	91	31.266	ENSCANG00000035172	TDRD1	88	31.139	Colobus_angolensis_palliatus
ENSHCOG00000002840	tdrd1	78	33.240	ENSCGRG00001004632	Tdrd1	83	33.052	Cricetulus_griseus_chok1gshd
ENSHCOG00000002840	tdrd1	84	33.004	ENSCGRG00000004981	Tdrd1	82	32.815	Cricetulus_griseus_crigri
ENSHCOG00000002840	tdrd1	89	42.490	ENSCSEG00000006983	tdrd1	91	44.585	Cynoglossus_semilaevis
ENSHCOG00000002840	tdrd1	81	45.259	ENSCVAG00000020980	tdrd1	93	45.259	Cyprinodon_variegatus
ENSHCOG00000002840	tdrd1	99	39.147	ENSDARG00000007465	tdrd1	99	38.791	Danio_rerio
ENSHCOG00000002840	tdrd1	85	31.351	ENSDNOG00000012114	TDRD1	82	31.216	Dasypus_novemcinctus
ENSHCOG00000002840	tdrd1	81	32.073	ENSDORG00000009986	Tdrd1	81	32.073	Dipodomys_ordii
ENSHCOG00000002840	tdrd1	84	30.499	ENSETEG00000020143	TDRD1	81	30.600	Echinops_telfairi
ENSHCOG00000002840	tdrd1	88	30.051	ENSEASG00005014802	TDRD1	81	37.143	Equus_asinus_asinus
ENSHCOG00000002840	tdrd1	88	30.986	ENSECAG00000009748	TDRD1	76	35.897	Equus_caballus
ENSHCOG00000002840	tdrd1	79	34.483	ENSEEUG00000010076	TDRD1	78	34.483	Erinaceus_europaeus
ENSHCOG00000002840	tdrd1	90	40.588	ENSELUG00000024364	tdrd1	91	40.588	Esox_lucius
ENSHCOG00000002840	tdrd1	90	31.545	ENSFCAG00000000632	TDRD1	81	32.349	Felis_catus
ENSHCOG00000002840	tdrd1	74	32.230	ENSFALG00000002237	TDRD1	91	32.360	Ficedula_albicollis
ENSHCOG00000002840	tdrd1	82	32.078	ENSFDAG00000013225	TDRD1	81	31.888	Fukomys_damarensis
ENSHCOG00000002840	tdrd1	95	47.155	ENSFHEG00000009203	tdrd1	99	46.645	Fundulus_heteroclitus
ENSHCOG00000002840	tdrd1	75	54.082	ENSGMOG00000016797	-	68	54.082	Gadus_morhua
ENSHCOG00000002840	tdrd1	82	30.425	ENSGALG00000046180	TDRD1	88	31.002	Gallus_gallus
ENSHCOG00000002840	tdrd1	90	44.100	ENSGAFG00000002668	tdrd1	88	44.142	Gambusia_affinis
ENSHCOG00000002840	tdrd1	76	51.962	ENSGACG00000006590	tdrd1	100	51.567	Gasterosteus_aculeatus
ENSHCOG00000002840	tdrd1	91	30.655	ENSGGOG00000004250	TDRD1	87	31.284	Gorilla_gorilla
ENSHCOG00000002840	tdrd1	95	46.915	ENSHBUG00000005216	tdrd1	96	46.408	Haplochromis_burtoni
ENSHCOG00000002840	tdrd1	91	31.293	ENSHGLG00000010877	TDRD1	88	31.408	Heterocephalus_glaber_female
ENSHCOG00000002840	tdrd1	84	31.673	ENSHGLG00100013857	TDRD1	91	31.673	Heterocephalus_glaber_male
ENSHCOG00000002840	tdrd1	99	37.175	ENSIPUG00000017232	tdrd1	97	42.194	Ictalurus_punctatus
ENSHCOG00000002840	tdrd1	85	32.118	ENSSTOG00000003221	TDRD1	82	31.927	Ictidomys_tridecemlineatus
ENSHCOG00000002840	tdrd1	84	33.008	ENSJJAG00000014720	Tdrd1	82	33.008	Jaculus_jaculus
ENSHCOG00000002840	tdrd1	89	50.499	ENSKMAG00000018558	tdrd1	97	50.499	Kryptolebias_marmoratus
ENSHCOG00000002840	tdrd1	95	46.388	ENSLBEG00000004161	tdrd1	93	46.388	Labrus_bergylta
ENSHCOG00000002840	tdrd1	83	33.427	ENSLACG00000011559	TDRD1	85	33.150	Latimeria_chalumnae
ENSHCOG00000002840	tdrd1	87	34.543	ENSLOCG00000012030	tdrd1	100	38.395	Lepisosteus_oculatus
ENSHCOG00000002840	tdrd1	75	34.146	ENSLAFG00000011575	TDRD1	94	32.701	Loxodonta_africana
ENSHCOG00000002840	tdrd1	91	31.432	ENSMFAG00000043487	TDRD1	87	31.432	Macaca_fascicularis
ENSHCOG00000002840	tdrd1	91	31.432	ENSMMUG00000022517	TDRD1	87	31.432	Macaca_mulatta
ENSHCOG00000002840	tdrd1	91	31.305	ENSMNEG00000031108	TDRD1	87	31.305	Macaca_nemestrina
ENSHCOG00000002840	tdrd1	91	31.305	ENSMLEG00000032281	TDRD1	87	31.179	Mandrillus_leucophaeus
ENSHCOG00000002840	tdrd1	99	48.463	ENSMAMG00000015287	tdrd1	99	50.904	Mastacembelus_armatus
ENSHCOG00000002840	tdrd1	95	46.495	ENSMZEG00005025315	tdrd1	94	46.225	Maylandia_zebra
ENSHCOG00000002840	tdrd1	83	31.002	ENSMGAG00000011067	TDRD1	98	30.108	Meleagris_gallopavo
ENSHCOG00000002840	tdrd1	68	38.043	ENSMAUG00000012164	Tdrd1	80	38.043	Mesocricetus_auratus
ENSHCOG00000002840	tdrd1	82	33.613	ENSMICG00000016190	TDRD1	82	33.613	Microcebus_murinus
ENSHCOG00000002840	tdrd1	83	34.188	ENSMOCG00000022360	Tdrd1	82	34.188	Microtus_ochrogaster
ENSHCOG00000002840	tdrd1	99	49.681	ENSMMOG00000014068	tdrd1	99	49.428	Mola_mola
ENSHCOG00000002840	tdrd1	83	32.759	ENSMODG00000009788	TDRD1	82	32.759	Monodelphis_domestica
ENSHCOG00000002840	tdrd1	93	61.448	ENSMALG00000022115	tdrd1	96	61.284	Monopterus_albus
ENSHCOG00000002840	tdrd1	84	33.052	MGP_CAROLIEiJ_G0023095	Tdrd1	82	32.722	Mus_caroli
ENSHCOG00000002840	tdrd1	90	31.139	ENSMUSG00000025081	Tdrd1	88	30.711	Mus_musculus
ENSHCOG00000002840	tdrd1	84	32.497	MGP_PahariEiJ_G0014583	Tdrd1	84	31.837	Mus_pahari
ENSHCOG00000002840	tdrd1	90	31.021	MGP_SPRETEiJ_G0024016	Tdrd1	88	30.721	Mus_spretus
ENSHCOG00000002840	tdrd1	79	32.064	ENSMPUG00000001987	TDRD1	79	31.278	Mustela_putorius_furo
ENSHCOG00000002840	tdrd1	83	32.479	ENSNGAG00000015231	Tdrd1	82	32.479	Nannospalax_galili
ENSHCOG00000002840	tdrd1	95	46.816	ENSNBRG00000017920	tdrd1	97	46.580	Neolamprologus_brichardi
ENSHCOG00000002840	tdrd1	83	39.080	ENSNLEG00000016228	TDRD1	80	38.686	Nomascus_leucogenys
ENSHCOG00000002840	tdrd1	82	30.547	ENSMEUG00000007717	TDRD1	81	30.547	Notamacropus_eugenii
ENSHCOG00000002840	tdrd1	84	32.630	ENSOPRG00000009180	TDRD1	82	32.630	Ochotona_princeps
ENSHCOG00000002840	tdrd1	83	31.303	ENSODEG00000011965	TDRD1	82	31.303	Octodon_degus
ENSHCOG00000002840	tdrd1	99	46.667	ENSONIG00000016382	tdrd1	100	46.667	Oreochromis_niloticus
ENSHCOG00000002840	tdrd1	84	31.386	ENSOANG00000001562	TDRD1	83	31.386	Ornithorhynchus_anatinus
ENSHCOG00000002840	tdrd1	86	33.333	ENSOCUG00000025327	TDRD1	84	33.333	Oryctolagus_cuniculus
ENSHCOG00000002840	tdrd1	98	41.176	ENSORLG00000004833	tdrd1	99	40.899	Oryzias_latipes
ENSHCOG00000002840	tdrd1	99	41.795	ENSORLG00020019231	tdrd1	99	41.509	Oryzias_latipes_hni
ENSHCOG00000002840	tdrd1	99	40.803	ENSORLG00015017184	tdrd1	99	40.513	Oryzias_latipes_hsok
ENSHCOG00000002840	tdrd1	99	41.693	ENSOMEG00000023637	tdrd1	98	41.863	Oryzias_melastigma
ENSHCOG00000002840	tdrd1	84	32.227	ENSOGAG00000001370	TDRD1	82	32.444	Otolemur_garnettii
ENSHCOG00000002840	tdrd1	84	31.768	ENSOARG00000014200	-	81	32.123	Ovis_aries
ENSHCOG00000002840	tdrd1	84	33.152	ENSPPAG00000041621	TDRD1	81	33.016	Pan_paniscus
ENSHCOG00000002840	tdrd1	90	31.505	ENSPPRG00000000191	TDRD1	81	32.303	Panthera_pardus
ENSHCOG00000002840	tdrd1	90	30.779	ENSPTIG00000010264	TDRD1	87	30.602	Panthera_tigris_altaica
ENSHCOG00000002840	tdrd1	91	30.703	ENSPTRG00000002958	TDRD1	87	30.714	Pan_troglodytes
ENSHCOG00000002840	tdrd1	91	31.179	ENSPANG00000020752	TDRD1	89	31.052	Papio_anubis
ENSHCOG00000002840	tdrd1	83	39.696	ENSPKIG00000010586	tdrd1	87	39.474	Paramormyrops_kingsleyae
ENSHCOG00000002840	tdrd1	84	30.332	ENSPSIG00000014655	TDRD1	81	30.323	Pelodiscus_sinensis
ENSHCOG00000002840	tdrd1	81	44.085	ENSPMGG00000018890	tdrd1	94	53.479	Periophthalmus_magnuspinnatus
ENSHCOG00000002840	tdrd1	81	33.333	ENSPEMG00000004582	Tdrd1	81	33.333	Peromyscus_maniculatus_bairdii
ENSHCOG00000002840	tdrd1	83	31.572	ENSPCIG00000009739	TDRD1	82	31.489	Phascolarctos_cinereus
ENSHCOG00000002840	tdrd1	80	47.443	ENSPFOG00000002145	tdrd1	88	47.845	Poecilia_formosa
ENSHCOG00000002840	tdrd1	88	46.292	ENSPLAG00000010241	tdrd1	89	46.134	Poecilia_latipinna
ENSHCOG00000002840	tdrd1	85	46.036	ENSPMEG00000021893	tdrd1	88	46.164	Poecilia_mexicana
ENSHCOG00000002840	tdrd1	94	44.052	ENSPREG00000022663	tdrd1	94	43.105	Poecilia_reticulata
ENSHCOG00000002840	tdrd1	84	31.929	ENSPPYG00000002671	TDRD1	81	31.793	Pongo_abelii
ENSHCOG00000002840	tdrd1	84	32.308	ENSPCOG00000026619	TDRD1	80	32.308	Propithecus_coquereli
ENSHCOG00000002840	tdrd1	85	32.398	ENSPVAG00000003055	TDRD1	82	32.118	Pteropus_vampyrus
ENSHCOG00000002840	tdrd1	99	46.604	ENSPNYG00000001706	tdrd1	99	46.487	Pundamilia_nyererei
ENSHCOG00000002840	tdrd1	96	39.949	ENSPNAG00000005831	tdrd1	97	40.306	Pygocentrus_nattereri
ENSHCOG00000002840	tdrd1	83	33.287	ENSRNOG00000017064	Tdrd1	82	33.333	Rattus_norvegicus
ENSHCOG00000002840	tdrd1	89	31.154	ENSRBIG00000029668	TDRD1	86	31.154	Rhinopithecus_bieti
ENSHCOG00000002840	tdrd1	90	31.154	ENSRROG00000043379	TDRD1	87	31.154	Rhinopithecus_roxellana
ENSHCOG00000002840	tdrd1	84	33.944	ENSSBOG00000023561	TDRD1	80	33.803	Saimiri_boliviensis_boliviensis
ENSHCOG00000002840	tdrd1	82	34.483	ENSSHAG00000014311	TDRD1	81	34.483	Sarcophilus_harrisii
ENSHCOG00000002840	tdrd1	82	39.232	ENSSFOG00015022020	tdrd1	92	39.232	Scleropages_formosus
ENSHCOG00000002840	tdrd1	94	47.345	ENSSMAG00000019271	tdrd1	93	47.345	Scophthalmus_maximus
ENSHCOG00000002840	tdrd1	93	48.157	ENSSDUG00000022012	tdrd1	98	47.811	Seriola_dumerili
ENSHCOG00000002840	tdrd1	94	48.457	ENSSLDG00000006423	tdrd1	99	48.114	Seriola_lalandi_dorsalis
ENSHCOG00000002840	tdrd1	87	35.775	ENSSARG00000008828	TDRD1	69	35.775	Sorex_araneus
ENSHCOG00000002840	tdrd1	91	50.456	ENSSPAG00000018805	tdrd1	94	50.456	Stegastes_partitus
ENSHCOG00000002840	tdrd1	84	32.218	ENSSSCG00000021075	TDRD1	82	32.218	Sus_scrofa
ENSHCOG00000002840	tdrd1	73	32.439	ENSTGUG00000010905	TDRD1	93	31.463	Taeniopygia_guttata
ENSHCOG00000002840	tdrd1	97	46.675	ENSTRUG00000012142	tdrd1	100	43.367	Takifugu_rubripes
ENSHCOG00000002840	tdrd1	74	57.554	ENSTNIG00000018898	tdrd1	100	58.993	Tetraodon_nigroviridis
ENSHCOG00000002840	tdrd1	89	31.919	ENSTBEG00000014417	-	81	31.919	Tupaia_belangeri
ENSHCOG00000002840	tdrd1	84	32.295	ENSTTRG00000010147	TDRD1	81	32.153	Tursiops_truncatus
ENSHCOG00000002840	tdrd1	90	32.078	ENSUAMG00000009025	TDRD1	87	31.901	Ursus_americanus
ENSHCOG00000002840	tdrd1	90	31.505	ENSUMAG00000000705	TDRD1	88	30.867	Ursus_maritimus
ENSHCOG00000002840	tdrd1	84	32.168	ENSVPAG00000004000	TDRD1	81	31.978	Vicugna_pacos
ENSHCOG00000002840	tdrd1	81	32.486	ENSVVUG00000009750	TDRD1	82	32.486	Vulpes_vulpes
ENSHCOG00000002840	tdrd1	73	47.302	ENSXCOG00000006412	tdrd1	93	47.217	Xiphophorus_couchianus
ENSHCOG00000002840	tdrd1	91	44.531	ENSXMAG00000008104	tdrd1	94	44.751	Xiphophorus_maculatus