EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002842 (Gene tree)
Gene ID: 109516465
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 5197 bases
Position: chrKV879958.1:1879309-1884505
Accession: 109516465
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018354	zf-C2H2	PF00096.26	4.3e-17	1	2
ENSHCOP00000018354	zf-C2H2	PF00096.26	4.3e-17	2	2
ENSHCOP00000018354	zf-met	PF12874.7	7.2e-11	1	2
ENSHCOP00000018354	zf-met	PF12874.7	7.2e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011471	-	3270	XM_019871034	ENSHCOP00000018354	1089 (aa)	XP_019726593	-

Gene Model

Click here to download ENSHCOG00000002842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002842	si:ch211-212k18.5	99	61.144	ENSAPOG00000013387	si:ch211-212k18.5	97	62.752	Acanthochromis_polyacanthus
ENSHCOG00000002842	si:ch211-212k18.5	82	66.564	ENSACIG00000019922	si:ch211-212k18.5	98	68.103	Amphilophus_citrinellus
ENSHCOG00000002842	si:ch211-212k18.5	99	63.230	ENSAOCG00000010737	si:ch211-212k18.5	97	63.660	Amphiprion_ocellaris
ENSHCOG00000002842	si:ch211-212k18.5	99	63.285	ENSAPEG00000006751	si:ch211-212k18.5	97	63.715	Amphiprion_percula
ENSHCOG00000002842	si:ch211-212k18.5	72	68.230	ENSATEG00000001254	si:ch211-212k18.5	95	68.800	Anabas_testudineus
ENSHCOG00000002842	si:ch211-212k18.5	99	60.947	ENSACLG00000009709	si:ch211-212k18.5	97	62.415	Astatotilapia_calliptera
ENSHCOG00000002842	si:ch211-212k18.5	98	53.328	ENSAMXG00000010979	si:ch211-212k18.5	96	53.553	Astyanax_mexicanus
ENSHCOG00000002842	si:ch211-212k18.5	99	59.716	ENSCSEG00000004426	si:ch211-212k18.5	97	59.534	Cynoglossus_semilaevis
ENSHCOG00000002842	si:ch211-212k18.5	99	58.828	ENSCVAG00000007475	si:ch211-212k18.5	98	60.050	Cyprinodon_variegatus
ENSHCOG00000002842	si:ch211-212k18.5	99	52.263	ENSDARG00000103316	si:ch211-212k18.5	97	52.024	Danio_rerio
ENSHCOG00000002842	si:ch211-212k18.5	55	47.460	ENSDARG00000075116	sall2	58	46.903	Danio_rerio
ENSHCOG00000002842	si:ch211-212k18.5	98	53.697	ENSELUG00000024534	si:ch211-212k18.5	97	55.556	Esox_lucius
ENSHCOG00000002842	si:ch211-212k18.5	68	48.319	ENSELUG00000004389	sall2	59	51.261	Esox_lucius
ENSHCOG00000002842	si:ch211-212k18.5	99	58.793	ENSFHEG00000017264	si:ch211-212k18.5	98	59.600	Fundulus_heteroclitus
ENSHCOG00000002842	si:ch211-212k18.5	99	56.975	ENSGAFG00000003746	si:ch211-212k18.5	98	58.734	Gambusia_affinis
ENSHCOG00000002842	si:ch211-212k18.5	99	60.778	ENSHBUG00000019672	si:ch211-212k18.5	99	62.609	Haplochromis_burtoni
ENSHCOG00000002842	si:ch211-212k18.5	81	57.835	ENSIPUG00000002559	sall2	74	59.277	Ictalurus_punctatus
ENSHCOG00000002842	si:ch211-212k18.5	99	60.033	ENSKMAG00000019657	si:ch211-212k18.5	98	61.032	Kryptolebias_marmoratus
ENSHCOG00000002842	si:ch211-212k18.5	99	61.092	ENSLBEG00000020887	si:ch211-212k18.5	97	61.616	Labrus_bergylta
ENSHCOG00000002842	si:ch211-212k18.5	73	68.561	ENSMAMG00000015887	si:ch211-212k18.5	99	70.534	Mastacembelus_armatus
ENSHCOG00000002842	si:ch211-212k18.5	99	60.862	ENSMZEG00005021214	si:ch211-212k18.5	97	62.330	Maylandia_zebra
ENSHCOG00000002842	si:ch211-212k18.5	95	64.396	ENSMMOG00000012726	si:ch211-212k18.5	96	65.057	Mola_mola
ENSHCOG00000002842	si:ch211-212k18.5	93	60.683	ENSMALG00000000979	si:ch211-212k18.5	97	62.051	Monopterus_albus
ENSHCOG00000002842	si:ch211-212k18.5	99	61.344	ENSNBRG00000023948	si:ch211-212k18.5	100	62.325	Neolamprologus_brichardi
ENSHCOG00000002842	si:ch211-212k18.5	96	38.212	ENSNBRG00000017645	sall2	53	37.562	Neolamprologus_brichardi
ENSHCOG00000002842	si:ch211-212k18.5	99	59.766	ENSORLG00000030429	si:ch211-212k18.5	99	59.550	Oryzias_latipes
ENSHCOG00000002842	si:ch211-212k18.5	99	59.614	ENSORLG00020008145	si:ch211-212k18.5	99	59.299	Oryzias_latipes_hni
ENSHCOG00000002842	si:ch211-212k18.5	99	59.346	ENSORLG00015004982	si:ch211-212k18.5	99	59.216	Oryzias_latipes_hsok
ENSHCOG00000002842	si:ch211-212k18.5	99	57.644	ENSOMEG00000013949	si:ch211-212k18.5	99	58.632	Oryzias_melastigma
ENSHCOG00000002842	si:ch211-212k18.5	96	60.258	ENSPMGG00000018714	si:ch211-212k18.5	99	60.276	Periophthalmus_magnuspinnatus
ENSHCOG00000002842	si:ch211-212k18.5	99	57.573	ENSPFOG00000023705	si:ch211-212k18.5	99	59.635	Poecilia_formosa
ENSHCOG00000002842	si:ch211-212k18.5	99	57.789	ENSPLAG00000002577	si:ch211-212k18.5	98	59.030	Poecilia_latipinna
ENSHCOG00000002842	si:ch211-212k18.5	99	57.452	ENSPMEG00000016395	si:ch211-212k18.5	99	59.687	Poecilia_mexicana
ENSHCOG00000002842	si:ch211-212k18.5	99	57.692	ENSPREG00000005292	si:ch211-212k18.5	98	58.828	Poecilia_reticulata
ENSHCOG00000002842	si:ch211-212k18.5	99	60.851	ENSPNYG00000021576	si:ch211-212k18.5	97	62.282	Pundamilia_nyererei
ENSHCOG00000002842	si:ch211-212k18.5	59	44.591	ENSPNAG00000021463	sall2	58	46.110	Pygocentrus_nattereri
ENSHCOG00000002842	si:ch211-212k18.5	75	85.714	ENSPNAG00000006123	si:ch211-212k18.5	94	53.274	Pygocentrus_nattereri
ENSHCOG00000002842	si:ch211-212k18.5	99	62.211	ENSSMAG00000006241	si:ch211-212k18.5	97	62.650	Scophthalmus_maximus
ENSHCOG00000002842	si:ch211-212k18.5	98	63.384	ENSSDUG00000006164	si:ch211-212k18.5	97	64.626	Seriola_dumerili
ENSHCOG00000002842	si:ch211-212k18.5	98	64.020	ENSSLDG00000003393	si:ch211-212k18.5	97	64.516	Seriola_lalandi_dorsalis
ENSHCOG00000002842	si:ch211-212k18.5	98	62.544	ENSSPAG00000013435	si:ch211-212k18.5	99	63.066	Stegastes_partitus
ENSHCOG00000002842	si:ch211-212k18.5	74	67.373	ENSTRUG00000025082	si:ch211-212k18.5	81	69.905	Takifugu_rubripes
ENSHCOG00000002842	si:ch211-212k18.5	60	40.397	ENSTRUG00000024556	sall2	63	41.315	Takifugu_rubripes
ENSHCOG00000002842	si:ch211-212k18.5	99	59.130	ENSXCOG00000000762	si:ch211-212k18.5	98	59.966	Xiphophorus_couchianus
ENSHCOG00000002842	si:ch211-212k18.5	99	57.705	ENSXMAG00000001461	si:ch211-212k18.5	98	58.863	Xiphophorus_maculatus