EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002845 (Gene tree)
Gene ID: 109512384
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3560 bases
Position: chrKV879821.1:2692574-2696133
Accession: 109512384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001817	MMR_HSR1	PF01926.23	4.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011464	-	1253	XM_019864050	ENSHCOP00000001817	248 (aa)	XP_019719609	UPI00094E2BE9

Gene Model

Click here to download ENSHCOG00000002845's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002845	sar1ab	80	82.828	ENSHCOG00000010953	sar1b	100	82.828
ENSHCOG00000002845	sar1ab	74	30.108	ENSHCOG00000003460	arf3a	94	30.108
ENSHCOG00000002845	sar1ab	50	34.921	ENSHCOG00000000920	arl8ba	68	34.921
ENSHCOG00000002845	sar1ab	53	35.036	ENSHCOG00000011881	arl4d	68	35.036
ENSHCOG00000002845	sar1ab	75	31.183	ENSHCOG00000016255	arl3l2	95	31.183
ENSHCOG00000002845	sar1ab	74	30.108	ENSHCOG00000003257	-	94	30.108
ENSHCOG00000002845	sar1ab	54	35.252	ENSHCOG00000014829	-	66	35.606
ENSHCOG00000002845	sar1ab	50	34.127	ENSHCOG00000005512	-	67	34.127
ENSHCOG00000002845	sar1ab	69	32.065	ENSHCOG00000008536	-	82	32.065
ENSHCOG00000002845	sar1ab	67	31.138	ENSHCOG00000005566	arl1	86	31.138
ENSHCOG00000002845	sar1ab	71	32.402	ENSHCOG00000019844	-	86	32.402
ENSHCOG00000002845	sar1ab	71	30.508	ENSHCOG00000002573	arl11	93	30.508
ENSHCOG00000002845	sar1ab	69	31.977	ENSHCOG00000015600	arl3	88	31.977
ENSHCOG00000002845	sar1ab	69	30.857	ENSHCOG00000003724	ARL6	84	30.857
ENSHCOG00000002845	sar1ab	79	30.457	ENSHCOG00000018128	ARF1	97	30.457
ENSHCOG00000002845	sar1ab	74	30.645	ENSHCOG00000020217	-	95	30.645
ENSHCOG00000002845	sar1ab	69	31.034	ENSHCOG00000015577	-	89	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002845	sar1ab	80	90.404	ENSACIG00000019827	sar1ab	100	90.404	Amphilophus_citrinellus
ENSHCOG00000002845	sar1ab	80	90.909	ENSAOCG00000022062	sar1ab	100	90.909	Amphiprion_ocellaris
ENSHCOG00000002845	sar1ab	80	90.909	ENSAPEG00000011525	sar1ab	100	90.909	Amphiprion_percula
ENSHCOG00000002845	sar1ab	80	94.444	ENSATEG00000003466	sar1ab	100	94.444	Anabas_testudineus
ENSHCOG00000002845	sar1ab	80	86.869	ENSACLG00000013053	sar1ab	100	86.869	Astatotilapia_calliptera
ENSHCOG00000002845	sar1ab	80	92.424	ENSCSEG00000004825	sar1ab	100	92.424	Cynoglossus_semilaevis
ENSHCOG00000002845	sar1ab	80	79.798	ENSCVAG00000006500	-	100	79.798	Cyprinodon_variegatus
ENSHCOG00000002845	sar1ab	80	87.879	ENSCVAG00000015162	sar1ab	100	87.879	Cyprinodon_variegatus
ENSHCOG00000002845	sar1ab	80	91.919	ENSDARG00000033320	sar1ab	100	91.919	Danio_rerio
ENSHCOG00000002845	sar1ab	80	82.828	ENSELUG00000013652	sar1a	100	82.828	Esox_lucius
ENSHCOG00000002845	sar1ab	80	93.434	ENSELUG00000024279	sar1ab	100	93.434	Esox_lucius
ENSHCOG00000002845	sar1ab	81	87.065	ENSFHEG00000021773	sar1ab	100	87.879	Fundulus_heteroclitus
ENSHCOG00000002845	sar1ab	80	80.303	ENSFHEG00000012352	-	100	80.303	Fundulus_heteroclitus
ENSHCOG00000002845	sar1ab	80	90.909	ENSGMOG00000012588	sar1ab	100	90.909	Gadus_morhua
ENSHCOG00000002845	sar1ab	80	88.889	ENSGAFG00000009702	sar1ab	100	88.889	Gambusia_affinis
ENSHCOG00000002845	sar1ab	80	80.303	ENSGAFG00000004846	-	100	80.303	Gambusia_affinis
ENSHCOG00000002845	sar1ab	80	92.424	ENSGACG00000008616	sar1ab	100	92.424	Gasterosteus_aculeatus
ENSHCOG00000002845	sar1ab	80	86.869	ENSHBUG00000021221	sar1ab	100	86.869	Haplochromis_burtoni
ENSHCOG00000002845	sar1ab	80	88.384	ENSKMAG00000018006	sar1ab	100	88.384	Kryptolebias_marmoratus
ENSHCOG00000002845	sar1ab	80	94.949	ENSLBEG00000001114	sar1ab	100	94.949	Labrus_bergylta
ENSHCOG00000002845	sar1ab	80	93.434	ENSMAMG00000021314	sar1ab	100	93.434	Mastacembelus_armatus
ENSHCOG00000002845	sar1ab	80	86.869	ENSMZEG00005027606	sar1ab	100	86.869	Maylandia_zebra
ENSHCOG00000002845	sar1ab	80	92.929	ENSMMOG00000010360	sar1ab	100	92.929	Mola_mola
ENSHCOG00000002845	sar1ab	80	91.919	ENSMALG00000005831	sar1ab	100	91.919	Monopterus_albus
ENSHCOG00000002845	sar1ab	80	87.374	ENSNBRG00000018772	sar1ab	100	87.374	Neolamprologus_brichardi
ENSHCOG00000002845	sar1ab	80	88.384	ENSONIG00000018509	sar1ab	100	88.384	Oreochromis_niloticus
ENSHCOG00000002845	sar1ab	88	75.688	ENSORLG00000009132	-	99	75.688	Oryzias_latipes
ENSHCOG00000002845	sar1ab	87	82.870	ENSORLG00000006779	sar1ab	72	82.870	Oryzias_latipes
ENSHCOG00000002845	sar1ab	89	80.909	ENSORLG00020005458	sar1ab	100	87.879	Oryzias_latipes_hni
ENSHCOG00000002845	sar1ab	88	76.147	ENSORLG00020007024	-	99	76.147	Oryzias_latipes_hni
ENSHCOG00000002845	sar1ab	88	75.229	ENSORLG00015006223	-	94	86.607	Oryzias_latipes_hsok
ENSHCOG00000002845	sar1ab	80	88.384	ENSORLG00015010542	sar1ab	100	88.384	Oryzias_latipes_hsok
ENSHCOG00000002845	sar1ab	80	89.394	ENSOMEG00000004948	sar1ab	100	89.394	Oryzias_melastigma
ENSHCOG00000002845	sar1ab	80	82.323	ENSOMEG00000012020	-	100	82.323	Oryzias_melastigma
ENSHCOG00000002845	sar1ab	80	86.364	ENSPKIG00000007615	sar1ab	100	86.364	Paramormyrops_kingsleyae
ENSHCOG00000002845	sar1ab	80	94.444	ENSPMGG00000013330	sar1ab	100	94.444	Periophthalmus_magnuspinnatus
ENSHCOG00000002845	sar1ab	80	89.899	ENSPFOG00000023432	sar1ab	100	89.899	Poecilia_formosa
ENSHCOG00000002845	sar1ab	80	89.899	ENSPLAG00000023705	sar1ab	100	89.899	Poecilia_latipinna
ENSHCOG00000002845	sar1ab	80	79.798	ENSPMEG00000001717	-	100	79.798	Poecilia_mexicana
ENSHCOG00000002845	sar1ab	80	89.899	ENSPMEG00000000559	sar1ab	100	89.899	Poecilia_mexicana
ENSHCOG00000002845	sar1ab	80	89.899	ENSPREG00000016098	sar1ab	100	89.899	Poecilia_reticulata
ENSHCOG00000002845	sar1ab	80	87.374	ENSPNYG00000011603	sar1ab	100	87.374	Pundamilia_nyererei
ENSHCOG00000002845	sar1ab	80	90.909	ENSPNAG00000008007	sar1ab	100	90.909	Pygocentrus_nattereri
ENSHCOG00000002845	sar1ab	80	88.384	ENSSFOG00015014010	sar1a	100	88.384	Scleropages_formosus
ENSHCOG00000002845	sar1ab	58	78.322	ENSSMAG00000020758	sar1ab	95	78.322	Scophthalmus_maximus
ENSHCOG00000002845	sar1ab	80	93.939	ENSSDUG00000010773	sar1ab	100	93.939	Seriola_dumerili
ENSHCOG00000002845	sar1ab	80	93.939	ENSSLDG00000025558	sar1ab	100	93.939	Seriola_lalandi_dorsalis
ENSHCOG00000002845	sar1ab	80	91.919	ENSSPAG00000009194	sar1ab	100	91.919	Stegastes_partitus
ENSHCOG00000002845	sar1ab	80	92.424	ENSTRUG00000007269	sar1ab	100	92.424	Takifugu_rubripes
ENSHCOG00000002845	sar1ab	80	91.919	ENSTNIG00000008635	sar1ab	100	91.919	Tetraodon_nigroviridis
ENSHCOG00000002845	sar1ab	80	80.808	ENSXMAG00000026223	SAR1A	100	80.808	Xiphophorus_maculatus
ENSHCOG00000002845	sar1ab	80	89.394	ENSXMAG00000003130	sar1ab	100	89.394	Xiphophorus_maculatus