EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002851 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 333 bases
Position: chrKV880483.1:52041-52373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018365	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011458	-	333	-	ENSHCOP00000018365	110 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000002851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002851	-	84	33.750	ENSHCOG00000012571	rbm14b	92	33.750
ENSHCOG00000002851	-	71	88.462	ENSHCOG00000012719	-	76	88.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002851	-	77	85.882	ENSG00000184672	RALYL	100	85.882	Homo_sapiens
ENSHCOG00000002851	-	66	79.452	ENSAPOG00000020641	-	86	79.452	Acanthochromis_polyacanthus
ENSHCOG00000002851	-	77	85.882	ENSAPOG00000005050	RALYL	83	85.882	Acanthochromis_polyacanthus
ENSHCOG00000002851	-	75	85.366	ENSACIG00000001335	-	74	80.682	Amphilophus_citrinellus
ENSHCOG00000002851	-	81	87.640	ENSAPEG00000021452	-	86	87.640	Amphiprion_percula
ENSHCOG00000002851	-	78	81.395	ENSAPEG00000010582	-	83	81.395	Amphiprion_percula
ENSHCOG00000002851	-	79	86.207	ENSCCAG00000025003	RALYL	84	86.207	Cebus_capucinus
ENSHCOG00000002851	-	75	82.927	ENSCSEG00000019406	-	79	82.927	Cynoglossus_semilaevis
ENSHCOG00000002851	-	79	86.207	ENSFHEG00000017466	-	61	86.207	Fundulus_heteroclitus
ENSHCOG00000002851	-	78	88.372	ENSFHEG00000000223	-	88	88.372	Fundulus_heteroclitus
ENSHCOG00000002851	-	73	95.000	ENSGAFG00000020052	-	78	95.000	Gambusia_affinis
ENSHCOG00000002851	-	77	87.059	ENSGAFG00000018541	RALYL	83	87.059	Gambusia_affinis
ENSHCOG00000002851	-	77	91.765	ENSLACG00000000135	-	96	91.765	Latimeria_chalumnae
ENSHCOG00000002851	-	73	81.250	ENSMMUG00000003920	-	82	81.250	Macaca_mulatta
ENSHCOG00000002851	-	78	87.209	ENSMAMG00000011137	RALYL	89	87.209	Mastacembelus_armatus
ENSHCOG00000002851	-	84	80.435	ENSMICG00000005558	RALYL	93	80.435	Microcebus_murinus
ENSHCOG00000002851	-	75	84.337	ENSMMOG00000004599	-	77	84.337	Mola_mola
ENSHCOG00000002851	-	85	81.915	ENSMODG00000029239	-	89	81.915	Monodelphis_domestica
ENSHCOG00000002851	-	77	84.706	ENSMUSG00000039717	Ralyl	100	84.706	Mus_musculus
ENSHCOG00000002851	-	78	86.047	ENSOANG00000030197	-	57	86.047	Ornithorhynchus_anatinus
ENSHCOG00000002851	-	77	88.235	ENSPKIG00000023807	RALYL	87	88.235	Paramormyrops_kingsleyae
ENSHCOG00000002851	-	82	83.333	ENSPCIG00000023938	-	78	83.333	Phascolarctos_cinereus
ENSHCOG00000002851	-	78	86.047	ENSRROG00000023925	RALYL	87	86.047	Rhinopithecus_roxellana
ENSHCOG00000002851	-	79	78.161	ENSSFOG00015012924	-	86	78.161	Scleropages_formosus
ENSHCOG00000002851	-	73	80.000	ENSSLDG00000008069	-	76	80.000	Seriola_lalandi_dorsalis
ENSHCOG00000002851	-	86	75.789	ENSSPAG00000014679	-	100	75.789	Stegastes_partitus
ENSHCOG00000002851	-	78	87.209	ENSTRUG00000021320	RALYL	93	87.209	Takifugu_rubripes
ENSHCOG00000002851	-	72	81.013	ENSTRUG00000002153	-	59	81.013	Takifugu_rubripes
ENSHCOG00000002851	-	85	73.118	ENSUAMG00000006020	-	97	73.118	Ursus_americanus
ENSHCOG00000002851	-	82	84.615	ENSXCOG00000016096	-	78	84.615	Xiphophorus_couchianus