EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000002898 (Gene tree)
Gene ID: 109510404
Gene Symbol: -
Alias: -
Full Name: zinc finger protein ZFMSA12A-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6269 bases
Position: chrKV880530.1:1144967-1151235
Accession: 109510404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001864	zf-C2H2	PF00096.26	3.2e-40	1	6
ENSHCOP00000001864	zf-C2H2	PF00096.26	3.2e-40	2	6
ENSHCOP00000001864	zf-C2H2	PF00096.26	3.2e-40	3	6
ENSHCOP00000001864	zf-C2H2	PF00096.26	3.2e-40	4	6
ENSHCOP00000001864	zf-C2H2	PF00096.26	3.2e-40	5	6
ENSHCOP00000001864	zf-C2H2	PF00096.26	3.2e-40	6	6
ENSHCOP00000001869	zf-C2H2	PF00096.26	7.1e-28	1	4
ENSHCOP00000001869	zf-C2H2	PF00096.26	7.1e-28	2	4
ENSHCOP00000001869	zf-C2H2	PF00096.26	7.1e-28	3	4
ENSHCOP00000001869	zf-C2H2	PF00096.26	7.1e-28	4	4
ENSHCOP00000001864	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011379	-	1912	-	ENSHCOP00000001869	599 (aa)	-	-
ENSHCOT00000011384	-	2003	XM_019860707	ENSHCOP00000001864	630 (aa)	XP_019716266	-

Gene Model

Click here to download ENSHCOG00000002898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000002898	-	63	35.065	ENSHCOG00000019465	-	86	35.065
ENSHCOG00000002898	-	55	34.831	ENSHCOG00000008234	-	73	34.831
ENSHCOG00000002898	-	58	39.091	ENSHCOG00000008213	-	50	39.091
ENSHCOG00000002898	-	57	35.065	ENSHCOG00000015105	-	91	33.333
ENSHCOG00000002898	-	53	43.478	ENSHCOG00000007464	-	50	31.977
ENSHCOG00000002898	-	54	40.541	ENSHCOG00000020725	-	70	40.541
ENSHCOG00000002898	-	53	44.444	ENSHCOG00000019497	-	90	31.700
ENSHCOG00000002898	-	60	46.429	ENSHCOG00000014713	-	96	46.429
ENSHCOG00000002898	-	65	46.491	ENSHCOG00000020993	-	60	46.491
ENSHCOG00000002898	-	65	37.226	ENSHCOG00000001272	-	97	38.889
ENSHCOG00000002898	-	55	38.060	ENSHCOG00000018972	znf710b	52	40.206
ENSHCOG00000002898	-	50	37.349	ENSHCOG00000001793	-	83	34.839
ENSHCOG00000002898	-	57	32.459	ENSHCOG00000020940	-	65	32.459
ENSHCOG00000002898	-	55	44.231	ENSHCOG00000013455	-	88	37.857
ENSHCOG00000002898	-	55	32.791	ENSHCOG00000007990	-	84	30.638
ENSHCOG00000002898	-	57	30.649	ENSHCOG00000011411	-	80	42.342
ENSHCOG00000002898	-	58	36.842	ENSHCOG00000015414	-	68	36.842
ENSHCOG00000002898	-	64	36.986	ENSHCOG00000019389	-	63	37.500
ENSHCOG00000002898	-	59	43.820	ENSHCOG00000019385	-	89	43.820
ENSHCOG00000002898	-	63	34.799	ENSHCOG00000001883	-	88	34.799
ENSHCOG00000002898	-	64	42.963	ENSHCOG00000015484	-	82	40.260
ENSHCOG00000002898	-	55	31.949	ENSHCOG00000018201	-	93	31.940
ENSHCOG00000002898	-	59	35.955	ENSHCOG00000008906	-	87	31.579
ENSHCOG00000002898	-	59	41.509	ENSHCOG00000001873	-	58	41.509
ENSHCOG00000002898	-	63	42.342	ENSHCOG00000001870	-	55	42.342
ENSHCOG00000002898	-	53	36.564	ENSHCOG00000000511	-	68	32.099
ENSHCOG00000002898	-	57	31.488	ENSHCOG00000000517	-	71	31.488
ENSHCOG00000002898	-	55	42.391	ENSHCOG00000008168	-	98	34.615
ENSHCOG00000002898	-	57	40.566	ENSHCOG00000000947	-	67	40.566
ENSHCOG00000002898	-	54	37.589	ENSHCOG00000017437	-	88	35.227
ENSHCOG00000002898	-	53	41.667	ENSHCOG00000019541	-	59	41.667
ENSHCOG00000002898	-	53	39.394	ENSHCOG00000009009	-	93	39.394
ENSHCOG00000002898	-	53	30.204	ENSHCOG00000021028	-	91	44.186
ENSHCOG00000002898	-	51	35.507	ENSHCOG00000012131	prdm5	77	35.507
ENSHCOG00000002898	-	73	37.121	ENSHCOG00000008116	scrt2	82	37.121
ENSHCOG00000002898	-	61	36.082	ENSHCOG00000021033	-	92	36.082
ENSHCOG00000002898	-	70	36.538	ENSHCOG00000014796	-	84	36.538
ENSHCOG00000002898	-	53	35.135	ENSHCOG00000001629	-	69	36.957
ENSHCOG00000002898	-	56	31.208	ENSHCOG00000001238	-	92	31.208
ENSHCOG00000002898	-	57	38.889	ENSHCOG00000012592	-	84	38.889
ENSHCOG00000002898	-	53	36.449	ENSHCOG00000016179	-	79	36.449
ENSHCOG00000002898	-	58	43.103	ENSHCOG00000017456	-	88	43.103
ENSHCOG00000002898	-	62	32.394	ENSHCOG00000020556	-	71	32.394
ENSHCOG00000002898	-	56	33.574	ENSHCOG00000020909	-	81	36.296
ENSHCOG00000002898	-	55	30.366	ENSHCOG00000001345	-	88	30.366
ENSHCOG00000002898	-	52	35.000	ENSHCOG00000015246	-	62	33.702
ENSHCOG00000002898	-	55	38.922	ENSHCOG00000015241	-	63	38.922
ENSHCOG00000002898	-	55	36.782	ENSHCOG00000008742	-	79	36.782
ENSHCOG00000002898	-	57	32.955	ENSHCOG00000008227	-	52	32.955
ENSHCOG00000002898	-	55	37.640	ENSHCOG00000014786	-	96	37.640
ENSHCOG00000002898	-	61	30.712	ENSHCOG00000001318	-	92	33.202
ENSHCOG00000002898	-	61	37.037	ENSHCOG00000007485	-	97	33.557
ENSHCOG00000002898	-	54	40.449	ENSHCOG00000019454	-	82	40.449
ENSHCOG00000002898	-	66	40.171	ENSHCOG00000020846	-	69	36.316
ENSHCOG00000002898	-	56	36.000	ENSHCOG00000020848	-	62	35.897
ENSHCOG00000002898	-	52	45.833	ENSHCOG00000003041	-	95	38.889
ENSHCOG00000002898	-	50	31.301	ENSHCOG00000014986	-	86	39.744
ENSHCOG00000002898	-	54	30.769	ENSHCOG00000015639	znf319b	89	30.769
ENSHCOG00000002898	-	56	37.113	ENSHCOG00000001292	-	62	37.113
ENSHCOG00000002898	-	55	41.250	ENSHCOG00000015441	-	73	43.396
ENSHCOG00000002898	-	63	30.333	ENSHCOG00000001638	-	87	30.333
ENSHCOG00000002898	-	55	43.478	ENSHCOG00000001631	-	84	39.259
ENSHCOG00000002898	-	55	36.782	ENSHCOG00000001245	-	69	36.782
ENSHCOG00000002898	-	61	32.323	ENSHCOG00000001242	-	67	30.833
ENSHCOG00000002898	-	53	41.606	ENSHCOG00000011432	-	92	41.606
ENSHCOG00000002898	-	55	36.441	ENSHCOG00000011433	-	78	36.441
ENSHCOG00000002898	-	53	38.571	ENSHCOG00000013489	-	91	35.789
ENSHCOG00000002898	-	65	34.615	ENSHCOG00000001942	-	93	39.344
ENSHCOG00000002898	-	54	31.301	ENSHCOG00000014797	-	55	31.301
ENSHCOG00000002898	-	62	40.458	ENSHCOG00000014792	-	62	40.458
ENSHCOG00000002898	-	53	33.910	ENSHCOG00000019438	-	84	33.910
ENSHCOG00000002898	-	53	34.351	ENSHCOG00000014874	-	61	44.231
ENSHCOG00000002898	-	59	35.465	ENSHCOG00000008028	-	82	35.465
ENSHCOG00000002898	-	56	46.429	ENSHCOG00000007664	-	97	41.053
ENSHCOG00000002898	-	56	40.449	ENSHCOG00000001308	-	66	36.232
ENSHCOG00000002898	-	71	33.854	ENSHCOG00000014881	-	81	30.672
ENSHCOG00000002898	-	55	44.186	ENSHCOG00000003021	-	54	43.820
ENSHCOG00000002898	-	53	38.462	ENSHCOG00000011612	zfat	56	38.462
ENSHCOG00000002898	-	66	33.462	ENSHCOG00000004326	GZF1	56	33.462
ENSHCOG00000002898	-	56	37.173	ENSHCOG00000001423	-	51	43.636
ENSHCOG00000002898	-	53	40.741	ENSHCOG00000020879	-	73	33.684
ENSHCOG00000002898	-	56	37.719	ENSHCOG00000008133	-	55	37.719
ENSHCOG00000002898	-	53	37.430	ENSHCOG00000015497	-	77	37.430
ENSHCOG00000002898	-	54	36.585	ENSHCOG00000014777	-	68	36.585
ENSHCOG00000002898	-	53	33.778	ENSHCOG00000015010	-	64	33.778
ENSHCOG00000002898	-	55	35.838	ENSHCOG00000001252	-	98	35.838
ENSHCOG00000002898	-	55	31.618	ENSHCOG00000001256	-	72	31.618
ENSHCOG00000002898	-	66	31.059	ENSHCOG00000015425	-	87	32.420
ENSHCOG00000002898	-	60	30.597	ENSHCOG00000019512	-	96	30.688
ENSHCOG00000002898	-	69	41.379	ENSHCOG00000019458	-	75	41.379
ENSHCOG00000002898	-	53	36.179	ENSHCOG00000007681	-	91	36.179
ENSHCOG00000002898	-	53	35.461	ENSHCOG00000016704	scrt1b	53	35.461
ENSHCOG00000002898	-	65	45.714	ENSHCOG00000015355	-	86	47.059
ENSHCOG00000002898	-	54	36.328	ENSHCOG00000001448	-	70	36.328
ENSHCOG00000002898	-	73	44.340	ENSHCOG00000014781	-	97	44.340
ENSHCOG00000002898	-	54	34.071	ENSHCOG00000012662	-	96	32.222
ENSHCOG00000002898	-	65	38.519	ENSHCOG00000002969	-	63	38.519
ENSHCOG00000002898	-	61	39.048	ENSHCOG00000007358	-	84	39.048
ENSHCOG00000002898	-	54	34.234	ENSHCOG00000019001	-	94	34.234
ENSHCOG00000002898	-	72	34.767	ENSHCOG00000019481	-	87	32.295
ENSHCOG00000002898	-	67	36.641	ENSHCOG00000001338	-	95	38.686
ENSHCOG00000002898	-	70	32.240	ENSHCOG00000012617	-	95	31.646
ENSHCOG00000002898	-	53	36.296	ENSHCOG00000020984	-	74	36.296
ENSHCOG00000002898	-	56	35.673	ENSHCOG00000015000	-	78	35.673
ENSHCOG00000002898	-	55	38.164	ENSHCOG00000015005	-	54	38.164
ENSHCOG00000002898	-	64	36.458	ENSHCOG00000007351	-	86	36.458
ENSHCOG00000002898	-	52	32.500	ENSHCOG00000014890	znf646	66	32.500
ENSHCOG00000002898	-	71	33.241	ENSHCOG00000020972	-	98	45.946
ENSHCOG00000002898	-	65	42.105	ENSHCOG00000020976	-	58	42.105
ENSHCOG00000002898	-	68	41.333	ENSHCOG00000010282	znf236	67	39.773
ENSHCOG00000002898	-	59	41.509	ENSHCOG00000008550	-	58	41.509
ENSHCOG00000002898	-	60	45.283	ENSHCOG00000013830	zbtb49	54	45.283
ENSHCOG00000002898	-	58	31.560	ENSHCOG00000006286	ZNF319	87	31.560
ENSHCOG00000002898	-	65	34.934	ENSHCOG00000000800	-	87	35.945
ENSHCOG00000002898	-	54	35.455	ENSHCOG00000001901	si:dkey-89b17.4	67	30.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002898	-	100	61.145	ENSATEG00000009436	-	85	79.570	Anabas_testudineus
ENSHCOG00000002898	-	99	48.119	ENSCVAG00000004222	-	92	47.806	Cyprinodon_variegatus
ENSHCOG00000002898	-	55	38.835	ENSCVAG00000019519	-	81	41.026	Cyprinodon_variegatus
ENSHCOG00000002898	-	55	41.844	ENSELUG00000009654	-	74	42.241	Esox_lucius
ENSHCOG00000002898	-	100	57.519	ENSKMAG00000011850	-	93	56.207	Kryptolebias_marmoratus
ENSHCOG00000002898	-	54	70.066	ENSLBEG00000011986	-	91	70.066	Labrus_bergylta
ENSHCOG00000002898	-	54	77.061	ENSONIG00000008984	-	99	77.061	Oreochromis_niloticus
ENSHCOG00000002898	-	55	41.667	ENSPFOG00000018462	-	89	41.667	Poecilia_formosa
ENSHCOG00000002898	-	56	44.853	ENSSFOG00015008577	-	99	42.945	Scleropages_formosus
ENSHCOG00000002898	-	100	61.791	ENSSMAG00000000056	-	96	62.239	Scophthalmus_maximus
ENSHCOG00000002898	-	100	54.116	ENSTRUG00000005880	-	95	54.878	Takifugu_rubripes
ENSHCOG00000002898	-	53	42.202	ENSXETG00000030249	-	55	42.202	Xenopus_tropicalis