EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000002900 (Gene tree)
Gene ID: 109525985
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11012 bases
Position: chrKV880248.1:1897723-1908734
Accession: 109525985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001866	tRNA_anti-codon	PF01336.25	4.2e-12	1	1
ENSHCOP00000001866	tRNA-synt_2	PF00152.20	4.9e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011376	-	2731	XM_019886960	ENSHCOP00000001866	598 (aa)	XP_019742519	-

Gene Model

Click here to download ENSHCOG00000002900's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000002900	kars	96	78.209	ENSG00000065427	KARS	100	87.255	Homo_sapiens
ENSHCOG00000002900	kars	97	88.927	ENSAPOG00000010997	kars	100	88.927	Acanthochromis_polyacanthus
ENSHCOG00000002900	kars	96	77.250	ENSAMEG00000005347	KARS	93	77.911	Ailuropoda_melanoleuca
ENSHCOG00000002900	kars	97	86.332	ENSACIG00000000304	kars	100	86.332	Amphilophus_citrinellus
ENSHCOG00000002900	kars	97	89.138	ENSAOCG00000012971	kars	97	90.502	Amphiprion_ocellaris
ENSHCOG00000002900	kars	97	90.830	ENSAPEG00000011144	kars	100	90.830	Amphiprion_percula
ENSHCOG00000002900	kars	97	89.619	ENSATEG00000004954	kars	100	89.619	Anabas_testudineus
ENSHCOG00000002900	kars	91	79.310	ENSAPLG00000012705	KARS	99	79.310	Anas_platyrhynchos
ENSHCOG00000002900	kars	96	77.375	ENSACAG00000007577	KARS	94	74.545	Anolis_carolinensis
ENSHCOG00000002900	kars	94	67.075	ENSANAG00000031739	-	94	66.903	Aotus_nancymaae
ENSHCOG00000002900	kars	95	80.385	ENSANAG00000030403	-	96	80.385	Aotus_nancymaae
ENSHCOG00000002900	kars	97	92.746	ENSACLG00000001613	kars	98	92.746	Astatotilapia_calliptera
ENSHCOG00000002900	kars	97	88.408	ENSAMXG00000030719	kars	100	88.408	Astyanax_mexicanus
ENSHCOG00000002900	kars	97	78.487	ENSBTAG00000015677	KARS	77	78.487	Bos_taurus
ENSHCOG00000002900	kars	93	61.141	WBGene00002238	kars-1	97	64.000	Caenorhabditis_elegans
ENSHCOG00000002900	kars	97	77.462	ENSCJAG00000014213	KARS	100	78.003	Callithrix_jacchus
ENSHCOG00000002900	kars	97	78.319	ENSCAFG00000020069	KARS	92	79.896	Canis_familiaris
ENSHCOG00000002900	kars	97	78.319	ENSCAFG00020001721	KARS	96	80.488	Canis_lupus_dingo
ENSHCOG00000002900	kars	94	78.010	ENSCHIG00000016073	-	95	78.010	Capra_hircus
ENSHCOG00000002900	kars	97	78.992	ENSCHIG00000014108	-	100	78.992	Capra_hircus
ENSHCOG00000002900	kars	95	80.634	ENSTSYG00000001643	KARS	97	80.212	Carlito_syrichta
ENSHCOG00000002900	kars	94	73.380	ENSCAPG00000016234	KARS	96	73.380	Cavia_aperea
ENSHCOG00000002900	kars	97	79.117	ENSCPOG00000012036	KARS	99	79.117	Cavia_porcellus
ENSHCOG00000002900	kars	95	79.861	ENSCCAG00000034307	-	96	80.560	Cebus_capucinus
ENSHCOG00000002900	kars	90	64.845	ENSCCAG00000030337	-	100	64.964	Cebus_capucinus
ENSHCOG00000002900	kars	97	76.712	ENSCATG00000038129	KARS	98	76.712	Cercocebus_atys
ENSHCOG00000002900	kars	95	79.407	ENSCLAG00000007905	KARS	96	79.407	Chinchilla_lanigera
ENSHCOG00000002900	kars	96	77.055	ENSCSAG00000003664	KARS	93	77.055	Chlorocebus_sabaeus
ENSHCOG00000002900	kars	76	84.683	ENSCHOG00000013447	KARS	73	84.683	Choloepus_hoffmanni
ENSHCOG00000002900	kars	86	74.023	ENSCPBG00000002553	-	93	74.023	Chrysemys_picta_bellii
ENSHCOG00000002900	kars	96	80.274	ENSCPBG00000026969	KARS	98	80.274	Chrysemys_picta_bellii
ENSHCOG00000002900	kars	95	67.845	ENSCING00000009513	-	98	68.021	Ciona_intestinalis
ENSHCOG00000002900	kars	53	71.875	ENSCSAVG00000001136	-	100	73.180	Ciona_savignyi
ENSHCOG00000002900	kars	95	68.947	ENSCSAVG00000007684	-	98	68.947	Ciona_savignyi
ENSHCOG00000002900	kars	96	74.446	ENSCANG00000032813	KARS	98	74.446	Colobus_angolensis_palliatus
ENSHCOG00000002900	kars	95	80.763	ENSCGRG00001004055	KARS	97	80.763	Cricetulus_griseus_chok1gshd
ENSHCOG00000002900	kars	95	80.763	ENSCGRG00000014242	KARS	97	80.763	Cricetulus_griseus_crigri
ENSHCOG00000002900	kars	96	90.625	ENSCSEG00000008324	kars	99	90.625	Cynoglossus_semilaevis
ENSHCOG00000002900	kars	96	91.304	ENSCVAG00000019686	kars	99	91.304	Cyprinodon_variegatus
ENSHCOG00000002900	kars	97	87.370	ENSDARG00000103799	kars	99	89.903	Danio_rerio
ENSHCOG00000002900	kars	94	78.388	ENSDNOG00000002241	KARS	92	78.893	Dasypus_novemcinctus
ENSHCOG00000002900	kars	93	62.590	ENSDORG00000024214	-	96	62.612	Dipodomys_ordii
ENSHCOG00000002900	kars	99	76.549	ENSDORG00000004780	-	97	79.310	Dipodomys_ordii
ENSHCOG00000002900	kars	96	69.739	FBgn0027084	LysRS	99	70.261	Drosophila_melanogaster
ENSHCOG00000002900	kars	96	78.253	ENSETEG00000008353	KARS	93	78.253	Echinops_telfairi
ENSHCOG00000002900	kars	95	70.753	ENSEBUG00000001284	-	97	70.753	Eptatretus_burgeri
ENSHCOG00000002900	kars	95	80.589	ENSEASG00005013497	KARS	97	80.589	Equus_asinus_asinus
ENSHCOG00000002900	kars	95	80.589	ENSECAG00000013424	KARS	97	80.589	Equus_caballus
ENSHCOG00000002900	kars	95	73.217	ENSEEUG00000007042	KARS	94	72.479	Erinaceus_europaeus
ENSHCOG00000002900	kars	94	81.206	ENSELUG00000014575	kars	97	81.206	Esox_lucius
ENSHCOG00000002900	kars	95	78.767	ENSFCAG00000008573	KARS	98	78.571	Felis_catus
ENSHCOG00000002900	kars	95	80.035	ENSFALG00000002543	KARS	97	80.035	Ficedula_albicollis
ENSHCOG00000002900	kars	96	78.425	ENSFDAG00000007155	KARS	97	79.102	Fukomys_damarensis
ENSHCOG00000002900	kars	97	88.754	ENSFHEG00000006172	kars	100	88.754	Fundulus_heteroclitus
ENSHCOG00000002900	kars	99	82.805	ENSGMOG00000002633	kars	96	82.805	Gadus_morhua
ENSHCOG00000002900	kars	96	80.345	ENSGALG00000000907	KARS	99	80.702	Gallus_gallus
ENSHCOG00000002900	kars	96	89.428	ENSGAFG00000017252	kars	99	89.428	Gambusia_affinis
ENSHCOG00000002900	kars	97	88.640	ENSGACG00000015749	kars	97	88.640	Gasterosteus_aculeatus
ENSHCOG00000002900	kars	95	81.501	ENSGAGG00000023836	KARS	97	81.501	Gopherus_agassizii
ENSHCOG00000002900	kars	86	73.828	ENSGAGG00000011960	-	95	74.162	Gopherus_agassizii
ENSHCOG00000002900	kars	96	78.041	ENSGGOG00000005515	KARS	98	78.705	Gorilla_gorilla
ENSHCOG00000002900	kars	97	92.746	ENSHBUG00000013619	kars	98	92.746	Haplochromis_burtoni
ENSHCOG00000002900	kars	96	79.723	ENSHGLG00000011898	KARS	98	80.142	Heterocephalus_glaber_female
ENSHCOG00000002900	kars	96	71.034	ENSHGLG00000015235	-	97	71.207	Heterocephalus_glaber_female
ENSHCOG00000002900	kars	96	64.334	ENSHGLG00000001298	-	97	64.334	Heterocephalus_glaber_female
ENSHCOG00000002900	kars	96	64.164	ENSHGLG00100006466	-	97	64.164	Heterocephalus_glaber_male
ENSHCOG00000002900	kars	96	70.862	ENSHGLG00100012523	-	97	71.034	Heterocephalus_glaber_male
ENSHCOG00000002900	kars	96	79.723	ENSHGLG00100012264	KARS	97	79.723	Heterocephalus_glaber_male
ENSHCOG00000002900	kars	97	89.619	ENSIPUG00000009862	kars	100	89.619	Ictalurus_punctatus
ENSHCOG00000002900	kars	97	78.224	ENSSTOG00000004205	KARS	99	78.547	Ictidomys_tridecemlineatus
ENSHCOG00000002900	kars	97	79.352	ENSJJAG00000020406	Kars	99	79.522	Jaculus_jaculus
ENSHCOG00000002900	kars	97	89.100	ENSKMAG00000006434	kars	100	89.100	Kryptolebias_marmoratus
ENSHCOG00000002900	kars	99	89.597	ENSLBEG00000026537	kars	99	89.597	Labrus_bergylta
ENSHCOG00000002900	kars	95	81.961	ENSLACG00000006667	KARS	92	81.961	Latimeria_chalumnae
ENSHCOG00000002900	kars	85	76.087	ENSLACG00000016399	-	99	76.087	Latimeria_chalumnae
ENSHCOG00000002900	kars	88	70.919	ENSLOCG00000013608	-	97	70.919	Lepisosteus_oculatus
ENSHCOG00000002900	kars	97	87.565	ENSLOCG00000004002	kars	99	87.565	Lepisosteus_oculatus
ENSHCOG00000002900	kars	94	78.984	ENSLAFG00000015340	KARS	92	78.984	Loxodonta_africana
ENSHCOG00000002900	kars	96	77.513	ENSMFAG00000040024	KARS	98	77.513	Macaca_fascicularis
ENSHCOG00000002900	kars	84	75.728	ENSMNEG00000035832	-	99	75.728	Macaca_nemestrina
ENSHCOG00000002900	kars	96	77.513	ENSMNEG00000042879	-	98	77.513	Macaca_nemestrina
ENSHCOG00000002900	kars	96	77.853	ENSMLEG00000034947	KARS	98	77.853	Mandrillus_leucophaeus
ENSHCOG00000002900	kars	94	91.681	ENSMAMG00000021559	kars	93	91.681	Mastacembelus_armatus
ENSHCOG00000002900	kars	97	92.746	ENSMZEG00005014382	kars	98	92.746	Maylandia_zebra
ENSHCOG00000002900	kars	98	75.707	ENSMGAG00000009000	KARS	97	80.692	Meleagris_gallopavo
ENSHCOG00000002900	kars	95	80.104	ENSMICG00000011997	KARS	97	80.104	Microcebus_murinus
ENSHCOG00000002900	kars	96	76.632	ENSMOCG00000019029	-	98	76.632	Microtus_ochrogaster
ENSHCOG00000002900	kars	96	79.553	ENSMOCG00000011829	Kars	98	79.553	Microtus_ochrogaster
ENSHCOG00000002900	kars	94	89.876	ENSMMOG00000016934	kars	100	89.876	Mola_mola
ENSHCOG00000002900	kars	94	78.092	ENSMODG00000002215	-	98	78.092	Monodelphis_domestica
ENSHCOG00000002900	kars	95	73.997	ENSMODG00000002238	-	92	73.997	Monodelphis_domestica
ENSHCOG00000002900	kars	97	89.965	ENSMALG00000020858	kars	100	89.965	Monopterus_albus
ENSHCOG00000002900	kars	81	81.081	MGP_CAROLIEiJ_G0031588	Kars	96	81.081	Mus_caroli
ENSHCOG00000002900	kars	95	80.522	ENSMUSG00000031948	Kars	97	80.522	Mus_musculus
ENSHCOG00000002900	kars	95	80.522	MGP_PahariEiJ_G0023186	Kars	97	80.522	Mus_pahari
ENSHCOG00000002900	kars	95	80.348	MGP_SPRETEiJ_G0032706	Kars	97	80.348	Mus_spretus
ENSHCOG00000002900	kars	96	77.458	ENSMPUG00000009871	KARS	94	78.120	Mustela_putorius_furo
ENSHCOG00000002900	kars	77	53.175	ENSMLUG00000026871	-	92	53.175	Myotis_lucifugus
ENSHCOG00000002900	kars	95	79.896	ENSMLUG00000015119	-	97	79.896	Myotis_lucifugus
ENSHCOG00000002900	kars	95	80.000	ENSNGAG00000018820	-	97	80.000	Nannospalax_galili
ENSHCOG00000002900	kars	92	79.204	ENSNGAG00000022944	-	95	79.204	Nannospalax_galili
ENSHCOG00000002900	kars	97	92.388	ENSNBRG00000011098	kars	98	92.388	Neolamprologus_brichardi
ENSHCOG00000002900	kars	96	78.378	ENSNLEG00000013072	KARS	98	79.046	Nomascus_leucogenys
ENSHCOG00000002900	kars	94	76.007	ENSMEUG00000008684	KARS	92	76.007	Notamacropus_eugenii
ENSHCOG00000002900	kars	96	78.596	ENSOPRG00000012544	KARS	95	78.596	Ochotona_princeps
ENSHCOG00000002900	kars	97	78.114	ENSODEG00000013099	-	99	79.340	Octodon_degus
ENSHCOG00000002900	kars	93	56.989	ENSODEG00000009464	-	97	56.989	Octodon_degus
ENSHCOG00000002900	kars	97	92.055	ENSONIG00000005937	kars	99	92.055	Oreochromis_niloticus
ENSHCOG00000002900	kars	94	80.496	ENSOANG00000008179	KARS	95	80.496	Ornithorhynchus_anatinus
ENSHCOG00000002900	kars	96	74.106	ENSOCUG00000015553	KARS	98	74.106	Oryctolagus_cuniculus
ENSHCOG00000002900	kars	95	89.929	ENSORLG00000007627	kars	93	90.975	Oryzias_latipes
ENSHCOG00000002900	kars	95	89.929	ENSORLG00020010056	kars	93	90.975	Oryzias_latipes_hni
ENSHCOG00000002900	kars	95	89.753	ENSORLG00015008179	kars	93	90.794	Oryzias_latipes_hsok
ENSHCOG00000002900	kars	96	90.278	ENSOMEG00000001710	kars	99	90.278	Oryzias_melastigma
ENSHCOG00000002900	kars	96	73.459	ENSOGAG00000005903	KARS	93	73.459	Otolemur_garnettii
ENSHCOG00000002900	kars	90	78.832	ENSOARG00000006928	KARS	96	78.832	Ovis_aries
ENSHCOG00000002900	kars	96	77.872	ENSPPAG00000036192	KARS	98	78.535	Pan_paniscus
ENSHCOG00000002900	kars	95	79.110	ENSPPRG00000003027	KARS	97	79.793	Panthera_pardus
ENSHCOG00000002900	kars	95	78.938	ENSPTIG00000008011	KARS	97	79.620	Panthera_tigris_altaica
ENSHCOG00000002900	kars	96	78.041	ENSPTRG00000008364	KARS	98	78.705	Pan_troglodytes
ENSHCOG00000002900	kars	96	77.683	ENSPANG00000024106	KARS	93	77.226	Papio_anubis
ENSHCOG00000002900	kars	97	88.256	ENSPKIG00000009896	kars	100	88.256	Paramormyrops_kingsleyae
ENSHCOG00000002900	kars	86	74.464	ENSPSIG00000003041	-	94	74.464	Pelodiscus_sinensis
ENSHCOG00000002900	kars	93	81.295	ENSPSIG00000009294	KARS	96	81.475	Pelodiscus_sinensis
ENSHCOG00000002900	kars	94	91.281	ENSPMGG00000006117	kars	100	91.281	Periophthalmus_magnuspinnatus
ENSHCOG00000002900	kars	99	77.537	ENSPEMG00000012277	Kars	98	79.452	Peromyscus_maniculatus_bairdii
ENSHCOG00000002900	kars	94	75.133	ENSPMAG00000008360	-	91	75.133	Petromyzon_marinus
ENSHCOG00000002900	kars	94	76.274	ENSPCIG00000025469	-	92	76.274	Phascolarctos_cinereus
ENSHCOG00000002900	kars	96	78.388	ENSPCIG00000010761	-	98	78.388	Phascolarctos_cinereus
ENSHCOG00000002900	kars	94	89.539	ENSPFOG00000013253	kars	92	89.539	Poecilia_formosa
ENSHCOG00000002900	kars	96	89.601	ENSPLAG00000004189	kars	99	89.601	Poecilia_latipinna
ENSHCOG00000002900	kars	96	89.428	ENSPMEG00000015698	kars	99	89.428	Poecilia_mexicana
ENSHCOG00000002900	kars	96	89.601	ENSPREG00000023179	kars	99	89.601	Poecilia_reticulata
ENSHCOG00000002900	kars	96	77.080	ENSPPYG00000007567	KARS	93	77.740	Pongo_abelii
ENSHCOG00000002900	kars	86	74.269	ENSPCAG00000010790	KARS	98	74.269	Procavia_capensis
ENSHCOG00000002900	kars	95	73.415	ENSPCOG00000003166	KARS	96	73.415	Propithecus_coquereli
ENSHCOG00000002900	kars	94	80.141	ENSPVAG00000006746	KARS	91	80.141	Pteropus_vampyrus
ENSHCOG00000002900	kars	97	92.746	ENSPNYG00000013095	kars	98	92.746	Pundamilia_nyererei
ENSHCOG00000002900	kars	97	88.408	ENSPNAG00000013828	kars	100	88.408	Pygocentrus_nattereri
ENSHCOG00000002900	kars	94	78.920	ENSRNOG00000019456	Kars	91	79.613	Rattus_norvegicus
ENSHCOG00000002900	kars	96	78.024	ENSRBIG00000030118	KARS	96	78.559	Rhinopithecus_bieti
ENSHCOG00000002900	kars	96	77.226	ENSRROG00000041418	KARS	96	78.559	Rhinopithecus_roxellana
ENSHCOG00000002900	kars	75	33.684	YNL073W	-	82	33.684	Saccharomyces_cerevisiae
ENSHCOG00000002900	kars	93	56.537	YDR037W	KRS1	94	56.537	Saccharomyces_cerevisiae
ENSHCOG00000002900	kars	95	79.861	ENSSBOG00000019255	KARS	98	80.354	Saimiri_boliviensis_boliviensis
ENSHCOG00000002900	kars	94	66.492	ENSSHAG00000002050	-	92	66.492	Sarcophilus_harrisii
ENSHCOG00000002900	kars	94	74.780	ENSSHAG00000001359	-	98	74.780	Sarcophilus_harrisii
ENSHCOG00000002900	kars	90	69.703	ENSSHAG00000009005	-	97	69.703	Sarcophilus_harrisii
ENSHCOG00000002900	kars	93	88.710	ENSSFOG00015014837	kars	100	88.710	Scleropages_formosus
ENSHCOG00000002900	kars	97	90.830	ENSSMAG00000021441	kars	100	90.830	Scophthalmus_maximus
ENSHCOG00000002900	kars	97	91.869	ENSSDUG00000001202	kars	100	91.869	Seriola_dumerili
ENSHCOG00000002900	kars	94	91.844	ENSSLDG00000021220	kars	98	91.844	Seriola_lalandi_dorsalis
ENSHCOG00000002900	kars	74	81.148	ENSSARG00000011493	KARS	79	81.148	Sorex_araneus
ENSHCOG00000002900	kars	96	79.966	ENSSPUG00000004974	KARS	98	80.000	Sphenodon_punctatus
ENSHCOG00000002900	kars	61	66.940	ENSSPUG00000000449	-	84	66.940	Sphenodon_punctatus
ENSHCOG00000002900	kars	94	90.231	ENSSPAG00000020365	kars	97	90.231	Stegastes_partitus
ENSHCOG00000002900	kars	96	78.752	ENSSSCG00000002704	KARS	98	79.422	Sus_scrofa
ENSHCOG00000002900	kars	93	80.179	ENSTGUG00000008400	KARS	100	80.179	Taeniopygia_guttata
ENSHCOG00000002900	kars	96	85.017	ENSTRUG00000017551	kars	93	86.195	Takifugu_rubripes
ENSHCOG00000002900	kars	97	84.536	ENSTNIG00000009351	kars	99	84.536	Tetraodon_nigroviridis
ENSHCOG00000002900	kars	93	62.567	ENSTBEG00000004610	KARS	97	62.567	Tupaia_belangeri
ENSHCOG00000002900	kars	94	78.547	ENSTTRG00000001221	KARS	92	78.547	Tursiops_truncatus
ENSHCOG00000002900	kars	96	78.657	ENSUAMG00000017557	KARS	97	78.657	Ursus_americanus
ENSHCOG00000002900	kars	96	78.082	ENSUMAG00000014559	KARS	93	78.082	Ursus_maritimus
ENSHCOG00000002900	kars	96	76.102	ENSVPAG00000003716	KARS	94	76.581	Vicugna_pacos
ENSHCOG00000002900	kars	97	77.983	ENSVVUG00000024338	KARS	97	80.874	Vulpes_vulpes
ENSHCOG00000002900	kars	97	80.205	ENSXETG00000003569	kars	100	80.205	Xenopus_tropicalis
ENSHCOG00000002900	kars	93	89.982	ENSXCOG00000011313	kars	99	89.982	Xiphophorus_couchianus
ENSHCOG00000002900	kars	96	89.601	ENSXMAG00000003191	kars	99	89.601	Xiphophorus_maculatus