EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSHCOG00000002997 (Gene tree)
Gene ID
109526017
Gene Symbol
rpl13
Alias
zgc:92272
Full Name
ribosomal protein L13
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
2761 bases
Position
chrKV880248.1:1886970-1889730
Accession
109526017
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000018413Ribosomal_L13ePF01294.182.7e-8311
ENSHCOP00000001882Ribosomal_L13ePF01294.185.9e-7611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000011347-618-ENSHCOP00000001882205 (aa)--
ENSHCOT00000011326-636XM_019887011ENSHCOP00000018413211 (aa)XP_019742570UPI00094F3058
Gene Model
Click here to download ENSHCOG00000002997's gene model file
Pathways
Pathway IDPathway NameSource
hcq03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000002997's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000002997rpl1310085.308ENSG00000167526RPL1310085.714Homo_sapiens
ENSHCOG00000002997rpl1310096.209ENSAPOG00000010933rpl1310096.209Acanthochromis_polyacanthus
ENSHCOG00000002997rpl1310076.777ENSAMEG00000001111RPL1310076.777Ailuropoda_melanoleuca
ENSHCOG00000002997rpl1310095.261ENSACIG00000000422rpl1310095.261Amphilophus_citrinellus
ENSHCOG00000002997rpl1310096.209ENSAOCG00000014635rpl1310096.209Amphiprion_ocellaris
ENSHCOG00000002997rpl1310096.209ENSAPEG00000011271rpl1310096.209Amphiprion_percula
ENSHCOG00000002997rpl1310095.735ENSATEG00000004902rpl1310095.735Anabas_testudineus
ENSHCOG00000002997rpl1310086.730ENSACAG00000017072RPL1310086.730Anolis_carolinensis
ENSHCOG00000002997rpl1310085.782ENSANAG00000030539RPL1310085.782Aotus_nancymaae
ENSHCOG00000002997rpl1310095.735ENSACLG00000001642rpl1310095.735Astatotilapia_calliptera
ENSHCOG00000002997rpl1310088.626ENSAMXG00000006495rpl1310088.626Astyanax_mexicanus
ENSHCOG00000002997rpl1310086.256ENSBTAG00000012044RPL137286.256Bos_taurus
ENSHCOG00000002997rpl1310077.725ENSBTAG00000033143-10077.725Bos_taurus
ENSHCOG00000002997rpl139857.767WBGene00004425rpl-139957.767Caenorhabditis_elegans
ENSHCOG00000002997rpl139985.238ENSCJAG00000016268-9985.238Callithrix_jacchus
ENSHCOG00000002997rpl1310085.782ENSCJAG00000009672-10085.782Callithrix_jacchus
ENSHCOG00000002997rpl138755.191ENSCAFG00000002388-10055.191Canis_familiaris
ENSHCOG00000002997rpl1310086.256ENSCAFG00000019840RPL1310086.256Canis_familiaris
ENSHCOG00000002997rpl139563.184ENSCAFG00020024795-9263.184Canis_lupus_dingo
ENSHCOG00000002997rpl1310086.256ENSCAFG00020005125RPL1310086.256Canis_lupus_dingo
ENSHCOG00000002997rpl1310086.256ENSCHIG00000001441-10086.256Capra_hircus
ENSHCOG00000002997rpl1310070.616ENSCHIG00000026795-9270.616Capra_hircus
ENSHCOG00000002997rpl139580.100ENSCHIG00000017227-8780.100Capra_hircus
ENSHCOG00000002997rpl1310086.256ENSTSYG00000027423RPL1310086.256Carlito_syrichta
ENSHCOG00000002997rpl1310086.256ENSCPOG00000027348RPL1310086.256Cavia_porcellus
ENSHCOG00000002997rpl1310085.782ENSCCAG00000024248RPL1310085.782Cebus_capucinus
ENSHCOG00000002997rpl1310086.256ENSCATG00000042426RPL1310086.256Cercocebus_atys
ENSHCOG00000002997rpl139963.333ENSCATG00000038806-9663.333Cercocebus_atys
ENSHCOG00000002997rpl1310086.256ENSCLAG00000003801RPL1310086.256Chinchilla_lanigera
ENSHCOG00000002997rpl1310085.308ENSCSAG00000000476-10085.308Chlorocebus_sabaeus
ENSHCOG00000002997rpl1310086.730ENSCPBG00000013618RPL1310086.730Chrysemys_picta_bellii
ENSHCOG00000002997rpl139765.686ENSCING00000002582-9265.686Ciona_intestinalis
ENSHCOG00000002997rpl139764.646ENSCSAVG00000007075-9964.646Ciona_savignyi
ENSHCOG00000002997rpl136787.324ENSCANG00000028258RPL137787.324Colobus_angolensis_palliatus
ENSHCOG00000002997rpl139364.467ENSCGRG00001008381-10064.467Cricetulus_griseus_chok1gshd
ENSHCOG00000002997rpl1310085.782ENSCGRG00001022563Rpl1310085.782Cricetulus_griseus_chok1gshd
ENSHCOG00000002997rpl1310070.616ENSCGRG00001023328-10070.616Cricetulus_griseus_chok1gshd
ENSHCOG00000002997rpl1310085.308ENSCGRG00000014556Rpl1310085.308Cricetulus_griseus_crigri
ENSHCOG00000002997rpl138566.111ENSCGRG00000016503-10066.111Cricetulus_griseus_crigri
ENSHCOG00000002997rpl1310094.787ENSCSEG00000008346rpl1310094.787Cynoglossus_semilaevis
ENSHCOG00000002997rpl1310094.313ENSCVAG00000019742rpl1310094.313Cyprinodon_variegatus
ENSHCOG00000002997rpl1310091.943ENSDARG00000099380rpl1310091.943Danio_rerio
ENSHCOG00000002997rpl1310085.782ENSDNOG00000034247RPL1310085.782Dasypus_novemcinctus
ENSHCOG00000002997rpl138185.294ENSDORG00000028330Rpl1310085.294Dipodomys_ordii
ENSHCOG00000002997rpl139563.366FBgn0011272RpL139363.366Drosophila_melanogaster
ENSHCOG00000002997rpl138957.754ENSETEG00000004518-9957.754Echinops_telfairi
ENSHCOG00000002997rpl139872.381ENSETEG00000015057-9872.381Echinops_telfairi
ENSHCOG00000002997rpl1310068.720ENSEBUG00000000730rpl139968.720Eptatretus_burgeri
ENSHCOG00000002997rpl139954.286ENSEEUG00000006113-9954.286Erinaceus_europaeus
ENSHCOG00000002997rpl136882.857ENSEEUG00000011190-10082.857Erinaceus_europaeus
ENSHCOG00000002997rpl1310090.521ENSELUG00000014509rpl1310090.521Esox_lucius
ENSHCOG00000002997rpl138759.677ENSFCAG00000029961-9359.677Felis_catus
ENSHCOG00000002997rpl1310085.308ENSFCAG00000003338RPL1310085.308Felis_catus
ENSHCOG00000002997rpl1310087.678ENSFALG00000003173RPL1310087.678Ficedula_albicollis
ENSHCOG00000002997rpl1310086.256ENSFDAG00000011310RPL1310086.256Fukomys_damarensis
ENSHCOG00000002997rpl1310095.735ENSFHEG00000006122rpl1310095.735Fundulus_heteroclitus
ENSHCOG00000002997rpl1310087.204ENSGMOG00000002752rpl1310087.204Gadus_morhua
ENSHCOG00000002997rpl1310086.730ENSGALG00000006179RPL1310086.730Gallus_gallus
ENSHCOG00000002997rpl1310090.732ENSGAFG00000017260rpl1310090.732Gambusia_affinis
ENSHCOG00000002997rpl1310090.995ENSGACG00000015752rpl1310090.995Gasterosteus_aculeatus
ENSHCOG00000002997rpl1310087.204ENSGAGG00000003371RPL1310087.204Gopherus_agassizii
ENSHCOG00000002997rpl1310068.720ENSGGOG00000026762-10068.720Gorilla_gorilla
ENSHCOG00000002997rpl138386.286ENSGGOG00000025427RPL139986.286Gorilla_gorilla
ENSHCOG00000002997rpl1310095.261ENSHBUG00000013579rpl1310095.261Haplochromis_burtoni
ENSHCOG00000002997rpl1310086.730ENSHGLG00000010880RPL1310086.730Heterocephalus_glaber_female
ENSHCOG00000002997rpl1310086.730ENSHGLG00100018449RPL1310086.730Heterocephalus_glaber_male
ENSHCOG00000002997rpl1310089.100ENSIPUG00000009775rpl1310089.100Ictalurus_punctatus
ENSHCOG00000002997rpl1310084.360ENSSTOG00000011963RPL1310084.360Ictidomys_tridecemlineatus
ENSHCOG00000002997rpl1310086.256ENSJJAG00000014012Rpl1310086.256Jaculus_jaculus
ENSHCOG00000002997rpl1310072.986ENSJJAG00000000236-10072.986Jaculus_jaculus
ENSHCOG00000002997rpl1310093.839ENSKMAG00000006540rpl1310093.839Kryptolebias_marmoratus
ENSHCOG00000002997rpl1310094.787ENSLBEG00000026455rpl1310094.787Labrus_bergylta
ENSHCOG00000002997rpl138465.169ENSLACG00000004644-10065.169Latimeria_chalumnae
ENSHCOG00000002997rpl136066.667ENSLACG00000001306-9566.667Latimeria_chalumnae
ENSHCOG00000002997rpl135678.992ENSLACG00000005311-10078.992Latimeria_chalumnae
ENSHCOG00000002997rpl139162.694ENSLACG00000000752-10062.694Latimeria_chalumnae
ENSHCOG00000002997rpl136179.688ENSLACG00000014843-9579.688Latimeria_chalumnae
ENSHCOG00000002997rpl1310086.730ENSLACG00000013768rpl1310086.730Latimeria_chalumnae
ENSHCOG00000002997rpl139165.482ENSLACG00000002299-9465.482Latimeria_chalumnae
ENSHCOG00000002997rpl1310092.417ENSLOCG00000004063rpl1310092.417Lepisosteus_oculatus
ENSHCOG00000002997rpl1310085.308ENSLAFG00000004054RPL1310085.308Loxodonta_africana
ENSHCOG00000002997rpl1310085.782ENSMFAG00000027717-10085.782Macaca_fascicularis
ENSHCOG00000002997rpl1310062.559ENSMFAG00000046109-9762.559Macaca_fascicularis
ENSHCOG00000002997rpl1310085.782ENSMMUG00000017928RPL1310085.782Macaca_mulatta
ENSHCOG00000002997rpl139961.429ENSMMUG00000038060-9661.429Macaca_mulatta
ENSHCOG00000002997rpl139360.199ENSMNEG00000033097-10060.199Macaca_nemestrina
ENSHCOG00000002997rpl139962.857ENSMNEG00000030483-9662.857Macaca_nemestrina
ENSHCOG00000002997rpl1310065.877ENSMLEG00000036728-10065.877Mandrillus_leucophaeus
ENSHCOG00000002997rpl139964.762ENSMLEG00000033776-9664.762Mandrillus_leucophaeus
ENSHCOG00000002997rpl1310096.209ENSMAMG00000021552rpl1310096.209Mastacembelus_armatus
ENSHCOG00000002997rpl1310095.735ENSMZEG00005014343rpl1310095.735Maylandia_zebra
ENSHCOG00000002997rpl138487.006ENSMGAG00000008027RPL1310087.006Meleagris_gallopavo
ENSHCOG00000002997rpl1310081.043ENSMAUG00000016802-10081.043Mesocricetus_auratus
ENSHCOG00000002997rpl137584.906ENSMAUG00000020543-10084.906Mesocricetus_auratus
ENSHCOG00000002997rpl137481.410ENSMICG00000027620-9081.410Microcebus_murinus
ENSHCOG00000002997rpl1310085.308ENSMICG00000043954-10085.308Microcebus_murinus
ENSHCOG00000002997rpl1310075.829ENSMOCG00000016985-10075.829Microtus_ochrogaster
ENSHCOG00000002997rpl1310070.616ENSMOCG00000011602-10070.616Microtus_ochrogaster
ENSHCOG00000002997rpl1310076.777ENSMOCG00000021875-10076.777Microtus_ochrogaster
ENSHCOG00000002997rpl1310084.834ENSMOCG00000002216-10084.834Microtus_ochrogaster
ENSHCOG00000002997rpl1310086.256ENSMOCG00000009058-10086.256Microtus_ochrogaster
ENSHCOG00000002997rpl1310096.682ENSMMOG00000016577rpl1310096.682Mola_mola
ENSHCOG00000002997rpl1310086.730ENSMODG00000003663RPL1310086.730Monodelphis_domestica
ENSHCOG00000002997rpl1310095.261ENSMALG00000020934rpl1310095.261Monopterus_albus
ENSHCOG00000002997rpl1310086.256MGP_CAROLIEiJ_G0031676Rpl1310086.256Mus_caroli
ENSHCOG00000002997rpl1310086.256ENSMUSG00000000740Rpl1310086.256Mus_musculus
ENSHCOG00000002997rpl1310086.256MGP_PahariEiJ_G0023274Rpl1310086.256Mus_pahari
ENSHCOG00000002997rpl135973.134MGP_PahariEiJ_G0022842-10073.134Mus_pahari
ENSHCOG00000002997rpl139481.407MGP_SPRETEiJ_G0031839-7881.407Mus_spretus
ENSHCOG00000002997rpl1310086.256MGP_SPRETEiJ_G0032794Rpl1310086.256Mus_spretus
ENSHCOG00000002997rpl139951.196ENSMPUG00000001481-9651.196Mustela_putorius_furo
ENSHCOG00000002997rpl1310086.256ENSMLUG00000010950RPL139486.256Myotis_lucifugus
ENSHCOG00000002997rpl138765.574ENSNGAG00000014655-9565.574Nannospalax_galili
ENSHCOG00000002997rpl138459.551ENSNGAG00000012072-9959.551Nannospalax_galili
ENSHCOG00000002997rpl1310085.782ENSNGAG00000018467Rpl1310085.782Nannospalax_galili
ENSHCOG00000002997rpl1310095.261ENSNBRG00000011031rpl1310095.261Neolamprologus_brichardi
ENSHCOG00000002997rpl1310069.340ENSNLEG00000028759-10069.811Nomascus_leucogenys
ENSHCOG00000002997rpl1310085.782ENSNLEG00000015774RPL1310085.782Nomascus_leucogenys
ENSHCOG00000002997rpl1310083.886ENSODEG00000019297-10083.886Octodon_degus
ENSHCOG00000002997rpl1310085.308ENSODEG00000019458-10085.308Octodon_degus
ENSHCOG00000002997rpl1310081.043ENSODEG00000019351-10081.043Octodon_degus
ENSHCOG00000002997rpl1310085.308ENSODEG00000004235-10085.308Octodon_degus
ENSHCOG00000002997rpl1310083.412ENSODEG00000020384-10083.412Octodon_degus
ENSHCOG00000002997rpl1310082.938ENSODEG00000019915-10082.938Octodon_degus
ENSHCOG00000002997rpl1310095.261ENSONIG00000005934rpl1310095.261Oreochromis_niloticus
ENSHCOG00000002997rpl1310085.782ENSOANG00000006729RPL1310085.782Ornithorhynchus_anatinus
ENSHCOG00000002997rpl1310081.991ENSOCUG00000024415-10082.464Oryctolagus_cuniculus
ENSHCOG00000002997rpl1310079.147ENSOCUG00000007536-10079.147Oryctolagus_cuniculus
ENSHCOG00000002997rpl1310081.043ENSOCUG00000022399-10081.517Oryctolagus_cuniculus
ENSHCOG00000002997rpl1310094.313ENSORLG00000007654rpl1310094.313Oryzias_latipes
ENSHCOG00000002997rpl1310093.839ENSORLG00020009960rpl1310093.839Oryzias_latipes_hni
ENSHCOG00000002997rpl1310093.839ENSORLG00015008108rpl1310093.839Oryzias_latipes_hsok
ENSHCOG00000002997rpl1310094.313ENSOMEG00000001728rpl1310094.313Oryzias_melastigma
ENSHCOG00000002997rpl1310086.256ENSOGAG00000026444RPL1310086.256Otolemur_garnettii
ENSHCOG00000002997rpl1310079.621ENSOARG00000003957-7179.621Ovis_aries
ENSHCOG00000002997rpl135661.739ENSOARG00000011291-6961.739Ovis_aries
ENSHCOG00000002997rpl1310067.773ENSPPAG00000041631-10067.773Pan_paniscus
ENSHCOG00000002997rpl138286.207ENSPPAG00000029415-9986.207Pan_paniscus
ENSHCOG00000002997rpl139980.476ENSPPAG00000042590-9680.476Pan_paniscus
ENSHCOG00000002997rpl1310085.308ENSPPRG00000003949RPL1310085.308Panthera_pardus
ENSHCOG00000002997rpl138459.341ENSPPRG00000006057-8659.341Panthera_pardus
ENSHCOG00000002997rpl136284.615ENSPTIG00000010985RPL138684.615Panthera_tigris_altaica
ENSHCOG00000002997rpl138459.341ENSPTIG00000014719-8659.341Panthera_tigris_altaica
ENSHCOG00000002997rpl1310067.299ENSPTRG00000047911-10067.299Pan_troglodytes
ENSHCOG00000002997rpl1310085.782ENSPTRG00000008480RPL1310085.782Pan_troglodytes
ENSHCOG00000002997rpl1310080.569ENSPTRG00000041770-10080.569Pan_troglodytes
ENSHCOG00000002997rpl1310086.256ENSPANG00000031667RPL1310086.256Papio_anubis
ENSHCOG00000002997rpl1310089.573ENSPKIG00000001789rpl1310089.573Paramormyrops_kingsleyae
ENSHCOG00000002997rpl1310087.678ENSPSIG00000015634RPL1310087.678Pelodiscus_sinensis
ENSHCOG00000002997rpl1310094.313ENSPMGG00000006067rpl1310094.313Periophthalmus_magnuspinnatus
ENSHCOG00000002997rpl1310086.256ENSPEMG00000010342Rpl1310086.256Peromyscus_maniculatus_bairdii
ENSHCOG00000002997rpl1310094.787ENSPFOG00000013435rpl1310094.787Poecilia_formosa
ENSHCOG00000002997rpl1310094.787ENSPLAG00000004085rpl1310094.787Poecilia_latipinna
ENSHCOG00000002997rpl1310094.787ENSPMEG00000015599rpl1310094.787Poecilia_mexicana
ENSHCOG00000002997rpl1310094.313ENSPREG00000023190rpl1310094.313Poecilia_reticulata
ENSHCOG00000002997rpl1310084.834ENSPCAG00000015461RPL1310084.834Procavia_capensis
ENSHCOG00000002997rpl1310086.256ENSPCOG00000024647RPL1310086.256Propithecus_coquereli
ENSHCOG00000002997rpl1310083.412ENSPVAG00000015130RPL1310083.412Pteropus_vampyrus
ENSHCOG00000002997rpl1310095.261ENSPNYG00000013189rpl1310095.261Pundamilia_nyererei
ENSHCOG00000002997rpl1310090.047ENSPNAG00000002916rpl1310090.047Pygocentrus_nattereri
ENSHCOG00000002997rpl1310086.256ENSRNOG00000015335Rpl1310086.256Rattus_norvegicus
ENSHCOG00000002997rpl1310081.517ENSRNOG00000029227AABR07054469.110081.517Rattus_norvegicus
ENSHCOG00000002997rpl1310085.308ENSRNOG00000055911LOC10036125910085.308Rattus_norvegicus
ENSHCOG00000002997rpl1310084.834ENSRNOG00000061438LOC10036049110084.834Rattus_norvegicus
ENSHCOG00000002997rpl139980.952ENSRNOG00000059545AC114446.110080.952Rattus_norvegicus
ENSHCOG00000002997rpl1310086.256ENSRBIG00000031937RPL1310086.256Rhinopithecus_bieti
ENSHCOG00000002997rpl139964.762ENSRBIG00000010434-8964.762Rhinopithecus_bieti
ENSHCOG00000002997rpl1310086.256ENSRROG00000036999-10086.256Rhinopithecus_roxellana
ENSHCOG00000002997rpl139964.762ENSRROG00000025626-8964.762Rhinopithecus_roxellana
ENSHCOG00000002997rpl139246.907YDL082WRPL13A10048.341Saccharomyces_cerevisiae
ENSHCOG00000002997rpl139247.423YMR142CRPL13B10048.815Saccharomyces_cerevisiae
ENSHCOG00000002997rpl1310085.782ENSSBOG00000028589-10085.782Saimiri_boliviensis_boliviensis
ENSHCOG00000002997rpl1310066.825ENSSBOG00000019618-10066.825Saimiri_boliviensis_boliviensis
ENSHCOG00000002997rpl138156.140ENSSHAG00000010433-9956.140Sarcophilus_harrisii
ENSHCOG00000002997rpl1310092.891ENSSFOG00015019594rpl1310092.891Scleropages_formosus
ENSHCOG00000002997rpl1310093.365ENSSMAG00000021443rpl1310093.365Scophthalmus_maximus
ENSHCOG00000002997rpl1310096.209ENSSDUG00000001262rpl1310096.209Seriola_dumerili
ENSHCOG00000002997rpl1310096.209ENSSLDG00000021182rpl1310096.209Seriola_lalandi_dorsalis
ENSHCOG00000002997rpl139650.718ENSSLDG00000007067-9450.718Seriola_lalandi_dorsalis
ENSHCOG00000002997rpl137685.625ENSSPUG00000006904RPL138985.625Sphenodon_punctatus
ENSHCOG00000002997rpl1310096.209ENSSPAG00000020434rpl1310096.209Stegastes_partitus
ENSHCOG00000002997rpl1310063.033ENSSSCG00000036198-10063.033Sus_scrofa
ENSHCOG00000002997rpl1310085.308ENSSSCG00000024974RPL1310085.308Sus_scrofa
ENSHCOG00000002997rpl139950.698ENSSSCG00000029020-9650.698Sus_scrofa
ENSHCOG00000002997rpl139964.286ENSSSCG00000003723-9964.286Sus_scrofa
ENSHCOG00000002997rpl139956.938ENSSSCG00000033294-9957.005Sus_scrofa
ENSHCOG00000002997rpl139960.577ENSSSCG00000007813-9960.577Sus_scrofa
ENSHCOG00000002997rpl1310086.256ENSTGUG00000007874RPL1310086.256Taeniopygia_guttata
ENSHCOG00000002997rpl1310093.365ENSTRUG00000021170rpl1310093.365Takifugu_rubripes
ENSHCOG00000002997rpl1310094.313ENSTNIG00000009349rpl1310094.313Tetraodon_nigroviridis
ENSHCOG00000002997rpl1310086.256ENSTTRG00000004374RPL1310086.256Tursiops_truncatus
ENSHCOG00000002997rpl1310086.730ENSUAMG00000020363RPL1310086.730Ursus_americanus
ENSHCOG00000002997rpl136078.571ENSVPAG00000000569-10078.571Vicugna_pacos
ENSHCOG00000002997rpl1310079.621ENSVVUG00000003839-10079.621Vulpes_vulpes
ENSHCOG00000002997rpl139452.683ENSVVUG00000005779-9252.683Vulpes_vulpes
ENSHCOG00000002997rpl1310083.412ENSXETG00000019835rpl1310083.412Xenopus_tropicalis
ENSHCOG00000002997rpl1310094.313ENSXCOG00000011315rpl1310094.313Xiphophorus_couchianus
ENSHCOG00000002997rpl1310094.787ENSXMAG00000003221rpl1310094.787Xiphophorus_maculatus

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