EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003006 (Gene tree)
Gene ID: 109517076
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: roquin-2-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 15917 bases
Position: chrKV879994.1:436776-452692
Accession: 109517076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001946	zf-CCCH	PF00642.24	0.00015	1	1
ENSHCOP00000001949	zf-CCCH	PF00642.24	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011240	-	6734	XM_019871993	ENSHCOP00000001946	1123 (aa)	XP_019727552	UPI00094E2BD3
ENSHCOT00000011233	-	6529	XM_019871992	ENSHCOP00000001949	1123 (aa)	XP_019727551	UPI00094E2BD3

Gene Model

Click here to download ENSHCOG00000003006's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003006's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003006	rc3h2	87	57.905	ENSG00000056586	RC3H2	94	83.742	Homo_sapiens
ENSHCOG00000003006	rc3h2	100	76.174	ENSAPOG00000002117	rc3h2	100	76.601	Acanthochromis_polyacanthus
ENSHCOG00000003006	rc3h2	87	58.004	ENSAMEG00000006498	RC3H2	80	58.517	Ailuropoda_melanoleuca
ENSHCOG00000003006	rc3h2	100	75.662	ENSAPEG00000007757	rc3h2	100	76.174	Amphiprion_percula
ENSHCOG00000003006	rc3h2	100	74.532	ENSATEG00000019414	rc3h2	100	74.446	Anabas_testudineus
ENSHCOG00000003006	rc3h2	86	58.776	ENSAPLG00000013920	RC3H2	80	58.818	Anas_platyrhynchos
ENSHCOG00000003006	rc3h2	87	57.905	ENSANAG00000030862	RC3H2	94	83.742	Aotus_nancymaae
ENSHCOG00000003006	rc3h2	100	73.373	ENSACLG00000023136	rc3h2	100	73.542	Astatotilapia_calliptera
ENSHCOG00000003006	rc3h2	100	58.925	ENSAMXG00000006778	rc3h2	100	65.735	Astyanax_mexicanus
ENSHCOG00000003006	rc3h2	87	58.103	ENSBTAG00000023867	RC3H2	80	58.617	Bos_taurus
ENSHCOG00000003006	rc3h2	87	57.905	ENSCJAG00000020050	RC3H2	94	83.742	Callithrix_jacchus
ENSHCOG00000003006	rc3h2	87	57.806	ENSCAFG00020015288	RC3H2	94	83.742	Canis_lupus_dingo
ENSHCOG00000003006	rc3h2	87	58.202	ENSCHIG00000019319	RC3H2	82	58.717	Capra_hircus
ENSHCOG00000003006	rc3h2	79	50.162	ENSCAPG00000017086	RC3H2	81	50.270	Cavia_aperea
ENSHCOG00000003006	rc3h2	87	57.962	ENSCPOG00000008511	RC3H2	80	58.342	Cavia_porcellus
ENSHCOG00000003006	rc3h2	87	58.004	ENSCCAG00000001404	RC3H2	94	83.742	Cebus_capucinus
ENSHCOG00000003006	rc3h2	87	57.905	ENSCATG00000036655	RC3H2	94	83.742	Cercocebus_atys
ENSHCOG00000003006	rc3h2	87	57.864	ENSCLAG00000013261	RC3H2	80	58.342	Chinchilla_lanigera
ENSHCOG00000003006	rc3h2	76	55.946	ENSCSAG00000013416	RC3H2	77	56.617	Chlorocebus_sabaeus
ENSHCOG00000003006	rc3h2	87	58.754	ENSCPBG00000009811	RC3H2	80	59.077	Chrysemys_picta_bellii
ENSHCOG00000003006	rc3h2	87	57.905	ENSCANG00000043140	RC3H2	94	83.742	Colobus_angolensis_palliatus
ENSHCOG00000003006	rc3h2	87	57.921	ENSCGRG00001010006	Rc3h2	80	58.133	Cricetulus_griseus_chok1gshd
ENSHCOG00000003006	rc3h2	72	61.337	ENSCGRG00000009255	Rc3h2	77	61.502	Cricetulus_griseus_crigri
ENSHCOG00000003006	rc3h2	100	73.012	ENSCSEG00000017460	rc3h2	100	73.012	Cynoglossus_semilaevis
ENSHCOG00000003006	rc3h2	99	69.836	ENSCVAG00000012202	rc3h2	100	70.000	Cyprinodon_variegatus
ENSHCOG00000003006	rc3h2	100	59.024	ENSDARG00000063050	rc3h2	100	59.215	Danio_rerio
ENSHCOG00000003006	rc3h2	87	57.806	ENSDNOG00000014557	RC3H2	80	58.417	Dasypus_novemcinctus
ENSHCOG00000003006	rc3h2	87	58.259	ENSDORG00000006398	Rc3h2	80	58.641	Dipodomys_ordii
ENSHCOG00000003006	rc3h2	98	51.566	ENSEASG00005020897	RC3H2	94	79.733	Equus_asinus_asinus
ENSHCOG00000003006	rc3h2	87	58.103	ENSECAG00000022176	RC3H2	80	58.617	Equus_caballus
ENSHCOG00000003006	rc3h2	100	65.520	ENSELUG00000006105	rc3h2	100	65.606	Esox_lucius
ENSHCOG00000003006	rc3h2	87	57.806	ENSFCAG00000007375	RC3H2	80	58.317	Felis_catus
ENSHCOG00000003006	rc3h2	87	58.696	ENSFALG00000002011	RC3H2	80	59.018	Ficedula_albicollis
ENSHCOG00000003006	rc3h2	87	58.061	ENSFDAG00000012477	RC3H2	80	58.541	Fukomys_damarensis
ENSHCOG00000003006	rc3h2	99	70.406	ENSFHEG00000012272	rc3h2	100	71.355	Fundulus_heteroclitus
ENSHCOG00000003006	rc3h2	68	65.006	ENSGMOG00000016709	-	99	65.414	Gadus_morhua
ENSHCOG00000003006	rc3h2	86	59.018	ENSGALG00000001253	RC3H2	80	59.059	Gallus_gallus
ENSHCOG00000003006	rc3h2	96	70.852	ENSGAFG00000007679	rc3h2	100	71.300	Gambusia_affinis
ENSHCOG00000003006	rc3h2	76	73.090	ENSGACG00000017369	rc3h2	100	91.629	Gasterosteus_aculeatus
ENSHCOG00000003006	rc3h2	86	59.077	ENSGAGG00000018295	RC3H2	87	59.118	Gopherus_agassizii
ENSHCOG00000003006	rc3h2	87	57.905	ENSGGOG00000017062	RC3H2	94	83.742	Gorilla_gorilla
ENSHCOG00000003006	rc3h2	100	74.125	ENSHBUG00000003976	rc3h2	100	74.295	Haplochromis_burtoni
ENSHCOG00000003006	rc3h2	87	57.495	ENSHGLG00100018015	RC3H2	80	57.968	Heterocephalus_glaber_male
ENSHCOG00000003006	rc3h2	100	58.639	ENSIPUG00000021433	rc3h2	100	58.384	Ictalurus_punctatus
ENSHCOG00000003006	rc3h2	87	58.061	ENSSTOG00000010655	RC3H2	80	58.442	Ictidomys_tridecemlineatus
ENSHCOG00000003006	rc3h2	87	57.962	ENSJJAG00000022376	Rc3h2	80	58.442	Jaculus_jaculus
ENSHCOG00000003006	rc3h2	100	73.328	ENSKMAG00000010936	rc3h2	100	73.067	Kryptolebias_marmoratus
ENSHCOG00000003006	rc3h2	99	53.912	ENSLOCG00000002894	rc3h2	100	53.767	Lepisosteus_oculatus
ENSHCOG00000003006	rc3h2	87	58.399	ENSLAFG00000003521	RC3H2	80	58.918	Loxodonta_africana
ENSHCOG00000003006	rc3h2	80	83.710	ENSMFAG00000035621	RC3H2	94	83.742	Macaca_fascicularis
ENSHCOG00000003006	rc3h2	87	57.905	ENSMMUG00000021134	RC3H2	94	83.742	Macaca_mulatta
ENSHCOG00000003006	rc3h2	87	57.905	ENSMNEG00000031599	RC3H2	92	83.521	Macaca_nemestrina
ENSHCOG00000003006	rc3h2	87	57.905	ENSMLEG00000033809	RC3H2	94	83.742	Mandrillus_leucophaeus
ENSHCOG00000003006	rc3h2	100	74.125	ENSMZEG00005017019	rc3h2	100	74.295	Maylandia_zebra
ENSHCOG00000003006	rc3h2	86	58.659	ENSMGAG00000007984	RC3H2	80	58.700	Meleagris_gallopavo
ENSHCOG00000003006	rc3h2	68	59.355	ENSMAUG00000003117	Rc3h2	69	59.355	Mesocricetus_auratus
ENSHCOG00000003006	rc3h2	87	57.864	ENSMICG00000003227	RC3H2	94	83.519	Microcebus_murinus
ENSHCOG00000003006	rc3h2	87	57.681	ENSMOCG00000009592	Rc3h2	80	58.142	Microtus_ochrogaster
ENSHCOG00000003006	rc3h2	84	91.611	ENSMMOG00000021305	rc3h2	98	91.611	Mola_mola
ENSHCOG00000003006	rc3h2	86	58.517	ENSMODG00000019725	RC3H2	67	58.559	Monodelphis_domestica
ENSHCOG00000003006	rc3h2	93	54.365	MGP_CAROLIEiJ_G0023516	Rc3h2	94	83.742	Mus_caroli
ENSHCOG00000003006	rc3h2	87	57.468	ENSMUSG00000075376	Rc3h2	94	83.742	Mus_musculus
ENSHCOG00000003006	rc3h2	87	57.666	MGP_PahariEiJ_G0024969	Rc3h2	94	83.742	Mus_pahari
ENSHCOG00000003006	rc3h2	87	57.567	MGP_SPRETEiJ_G0024436	Rc3h2	94	83.742	Mus_spretus
ENSHCOG00000003006	rc3h2	87	58.004	ENSMPUG00000014141	RC3H2	80	58.517	Mustela_putorius_furo
ENSHCOG00000003006	rc3h2	86	58.175	ENSMLUG00000013992	RC3H2	80	58.216	Myotis_lucifugus
ENSHCOG00000003006	rc3h2	100	74.381	ENSNBRG00000009276	rc3h2	100	74.552	Neolamprologus_brichardi
ENSHCOG00000003006	rc3h2	87	56.973	ENSNLEG00000017204	RC3H2	94	83.742	Nomascus_leucogenys
ENSHCOG00000003006	rc3h2	55	82.609	ENSMEUG00000001299	-	57	82.609	Notamacropus_eugenii
ENSHCOG00000003006	rc3h2	69	55.172	ENSOPRG00000000135	RC3H2	75	55.474	Ochotona_princeps
ENSHCOG00000003006	rc3h2	100	73.689	ENSONIG00000003945	rc3h2	100	73.942	Oreochromis_niloticus
ENSHCOG00000003006	rc3h2	87	58.342	ENSOANG00000008194	RC3H2	88	58.659	Ornithorhynchus_anatinus
ENSHCOG00000003006	rc3h2	86	58.434	ENSOCUG00000008804	RC3H2	80	58.475	Oryctolagus_cuniculus
ENSHCOG00000003006	rc3h2	100	71.976	ENSORLG00000010018	rc3h2	100	72.147	Oryzias_latipes
ENSHCOG00000003006	rc3h2	100	71.830	ENSORLG00020013257	rc3h2	100	71.891	Oryzias_latipes_hni
ENSHCOG00000003006	rc3h2	100	72.000	ENSORLG00015001525	rc3h2	100	72.170	Oryzias_latipes_hsok
ENSHCOG00000003006	rc3h2	100	72.402	ENSOMEG00000023540	rc3h2	100	72.572	Oryzias_melastigma
ENSHCOG00000003006	rc3h2	87	58.004	ENSOGAG00000010678	RC3H2	80	58.317	Otolemur_garnettii
ENSHCOG00000003006	rc3h2	87	58.300	ENSOARG00000013965	RC3H2	80	58.818	Ovis_aries
ENSHCOG00000003006	rc3h2	87	57.905	ENSPPAG00000036013	RC3H2	94	83.742	Pan_paniscus
ENSHCOG00000003006	rc3h2	87	57.806	ENSPPRG00000008698	RC3H2	89	58.317	Panthera_pardus
ENSHCOG00000003006	rc3h2	87	57.806	ENSPTIG00000014257	RC3H2	89	58.317	Panthera_tigris_altaica
ENSHCOG00000003006	rc3h2	87	57.905	ENSPTRG00000021339	RC3H2	94	83.742	Pan_troglodytes
ENSHCOG00000003006	rc3h2	87	56.324	ENSPANG00000025840	RC3H2	94	80.178	Papio_anubis
ENSHCOG00000003006	rc3h2	99	60.997	ENSPKIG00000021910	rc3h2	96	60.739	Paramormyrops_kingsleyae
ENSHCOG00000003006	rc3h2	86	58.635	ENSPSIG00000005393	RC3H2	80	58.676	Pelodiscus_sinensis
ENSHCOG00000003006	rc3h2	86	89.616	ENSPMGG00000023963	rc3h2	95	89.616	Periophthalmus_magnuspinnatus
ENSHCOG00000003006	rc3h2	87	57.864	ENSPEMG00000023441	Rc3h2	80	58.242	Peromyscus_maniculatus_bairdii
ENSHCOG00000003006	rc3h2	79	83.937	ENSPCIG00000025559	RC3H2	78	83.937	Phascolarctos_cinereus
ENSHCOG00000003006	rc3h2	97	70.848	ENSPFOG00000019699	rc3h2	98	71.113	Poecilia_formosa
ENSHCOG00000003006	rc3h2	91	67.280	ENSPLAG00000005799	rc3h2	97	67.086	Poecilia_latipinna
ENSHCOG00000003006	rc3h2	97	70.848	ENSPMEG00000014187	rc3h2	98	71.113	Poecilia_mexicana
ENSHCOG00000003006	rc3h2	99	71.490	ENSPREG00000008979	rc3h2	100	71.071	Poecilia_reticulata
ENSHCOG00000003006	rc3h2	73	71.146	ENSPCAG00000010154	RC3H2	66	71.146	Procavia_capensis
ENSHCOG00000003006	rc3h2	100	73.311	ENSPNYG00000012063	rc3h2	100	73.480	Pundamilia_nyererei
ENSHCOG00000003006	rc3h2	100	59.375	ENSPNAG00000017502	rc3h2	100	59.443	Pygocentrus_nattereri
ENSHCOG00000003006	rc3h2	87	57.525	ENSRNOG00000009196	Rc3h2	83	57.900	Rattus_norvegicus
ENSHCOG00000003006	rc3h2	87	58.103	ENSRBIG00000032579	RC3H2	94	83.742	Rhinopithecus_bieti
ENSHCOG00000003006	rc3h2	87	58.004	ENSRROG00000043784	RC3H2	94	83.742	Rhinopithecus_roxellana
ENSHCOG00000003006	rc3h2	87	57.806	ENSSBOG00000029100	RC3H2	97	80.983	Saimiri_boliviensis_boliviensis
ENSHCOG00000003006	rc3h2	95	55.225	ENSSHAG00000007498	RC3H2	80	58.759	Sarcophilus_harrisii
ENSHCOG00000003006	rc3h2	100	76.178	ENSSMAG00000020048	rc3h2	100	76.541	Scophthalmus_maximus
ENSHCOG00000003006	rc3h2	100	75.000	ENSSDUG00000016022	rc3h2	100	76.300	Seriola_dumerili
ENSHCOG00000003006	rc3h2	100	74.916	ENSSLDG00000016070	rc3h2	100	76.215	Seriola_lalandi_dorsalis
ENSHCOG00000003006	rc3h2	87	58.160	ENSSARG00000012329	RC3H2	80	58.676	Sorex_araneus
ENSHCOG00000003006	rc3h2	87	58.061	ENSSPUG00000001457	RC3H2	80	58.375	Sphenodon_punctatus
ENSHCOG00000003006	rc3h2	100	76.300	ENSSPAG00000005233	rc3h2	100	76.300	Stegastes_partitus
ENSHCOG00000003006	rc3h2	87	57.848	ENSSSCG00000005575	RC3H2	92	83.519	Sus_scrofa
ENSHCOG00000003006	rc3h2	87	58.597	ENSTGUG00000006889	-	80	58.918	Taeniopygia_guttata
ENSHCOG00000003006	rc3h2	87	68.020	ENSTNIG00000004942	rc3h2	98	68.081	Tetraodon_nigroviridis
ENSHCOG00000003006	rc3h2	71	60.958	ENSTBEG00000009622	RC3H2	78	61.244	Tupaia_belangeri
ENSHCOG00000003006	rc3h2	80	64.220	ENSTTRG00000016954	RC3H2	73	64.529	Tursiops_truncatus
ENSHCOG00000003006	rc3h2	87	58.004	ENSUAMG00000015355	RC3H2	80	58.517	Ursus_americanus
ENSHCOG00000003006	rc3h2	87	58.004	ENSUMAG00000003161	RC3H2	94	83.742	Ursus_maritimus
ENSHCOG00000003006	rc3h2	87	57.962	ENSVPAG00000005994	RC3H2	80	58.475	Vicugna_pacos
ENSHCOG00000003006	rc3h2	87	57.806	ENSVVUG00000009519	RC3H2	83	58.417	Vulpes_vulpes
ENSHCOG00000003006	rc3h2	99	66.014	ENSXCOG00000005002	rc3h2	94	91.156	Xiphophorus_couchianus
ENSHCOG00000003006	rc3h2	99	71.404	ENSXMAG00000001724	rc3h2	100	71.146	Xiphophorus_maculatus