EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000003041 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8563 bases
Position: chrKV880534.1:5626411-5634973
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000001974	zf-C2H2	PF00096.26	7.2e-38	1	6
ENSHCOP00000001974	zf-C2H2	PF00096.26	7.2e-38	2	6
ENSHCOP00000001974	zf-C2H2	PF00096.26	7.2e-38	3	6
ENSHCOP00000001974	zf-C2H2	PF00096.26	7.2e-38	4	6
ENSHCOP00000001974	zf-C2H2	PF00096.26	7.2e-38	5	6
ENSHCOP00000001974	zf-C2H2	PF00096.26	7.2e-38	6	6
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	1	7
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	2	7
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	3	7
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	4	7
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	5	7
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	6	7
ENSHCOP00000001972	zf-C2H2	PF00096.26	1e-37	7	7
ENSHCOP00000018466	zf-C2H2	PF00096.26	4.1e-31	1	5
ENSHCOP00000018466	zf-C2H2	PF00096.26	4.1e-31	2	5
ENSHCOP00000018466	zf-C2H2	PF00096.26	4.1e-31	3	5
ENSHCOP00000018466	zf-C2H2	PF00096.26	4.1e-31	4	5
ENSHCOP00000018466	zf-C2H2	PF00096.26	4.1e-31	5	5
ENSHCOP00000001974	zf-met	PF12874.7	3.4e-12	1	2
ENSHCOP00000001974	zf-met	PF12874.7	3.4e-12	2	2
ENSHCOP00000001972	zf-met	PF12874.7	1.1e-08	1	2
ENSHCOP00000001972	zf-met	PF12874.7	1.1e-08	2	2
ENSHCOP00000018466	zf-met	PF12874.7	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011198	-	996	-	ENSHCOP00000001972	331 (aa)	-	-
ENSHCOT00000011190	-	891	-	ENSHCOP00000001974	296 (aa)	-	-
ENSHCOT00000011211	-	1173	-	ENSHCOP00000018466	390 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000003041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000003041	-	93	43.043	ENSHCOG00000013489	-	99	41.833
ENSHCOG00000003041	-	95	40.945	ENSHCOG00000008601	-	93	41.722
ENSHCOG00000003041	-	92	45.270	ENSHCOG00000014792	-	52	49.587
ENSHCOG00000003041	-	92	42.982	ENSHCOG00000014797	-	56	47.027
ENSHCOG00000003041	-	90	49.123	ENSHCOG00000014796	-	66	49.123
ENSHCOG00000003041	-	93	47.191	ENSHCOG00000021033	-	74	51.892
ENSHCOG00000003041	-	95	45.045	ENSHCOG00000015386	-	90	43.933
ENSHCOG00000003041	-	89	43.750	ENSHCOG00000015463	-	68	46.927
ENSHCOG00000003041	-	95	43.548	ENSHCOG00000019555	GFI1	61	40.881
ENSHCOG00000003041	-	91	44.633	ENSHCOG00000018201	-	82	44.633
ENSHCOG00000003041	-	95	35.484	ENSHCOG00000015639	znf319b	90	40.860
ENSHCOG00000003041	-	96	43.439	ENSHCOG00000001256	-	73	47.059
ENSHCOG00000003041	-	96	43.277	ENSHCOG00000001252	-	97	47.953
ENSHCOG00000003041	-	93	38.679	ENSHCOG00000008234	-	71	44.762
ENSHCOG00000003041	-	96	45.498	ENSHCOG00000014777	-	77	48.276
ENSHCOG00000003041	-	89	45.024	ENSHCOG00000015414	-	66	47.895
ENSHCOG00000003041	-	79	47.727	ENSHCOG00000004879	znf341	51	45.098
ENSHCOG00000003041	-	86	41.176	ENSHCOG00000019435	SNAI2	55	41.176
ENSHCOG00000003041	-	95	47.465	ENSHCOG00000020940	-	65	47.465
ENSHCOG00000003041	-	93	36.842	ENSHCOG00000020556	-	62	35.398
ENSHCOG00000003041	-	93	44.583	ENSHCOG00000007990	-	71	51.366
ENSHCOG00000003041	-	89	33.333	ENSHCOG00000001901	si:dkey-89b17.4	70	34.783
ENSHCOG00000003041	-	96	44.079	ENSHCOG00000000627	-	57	49.630
ENSHCOG00000003041	-	92	45.594	ENSHCOG00000021028	-	89	51.685
ENSHCOG00000003041	-	93	46.863	ENSHCOG00000015476	-	91	48.958
ENSHCOG00000003041	-	89	41.810	ENSHCOG00000001631	-	54	50.820
ENSHCOG00000003041	-	93	43.500	ENSHCOG00000019541	-	56	50.282
ENSHCOG00000003041	-	91	47.525	ENSHCOG00000014850	-	65	45.946
ENSHCOG00000003041	-	92	47.525	ENSHCOG00000014855	-	51	47.525
ENSHCOG00000003041	-	96	46.707	ENSHCOG00000015105	-	99	47.340
ENSHCOG00000003041	-	96	46.914	ENSHCOG00000020993	-	63	52.874
ENSHCOG00000003041	-	92	42.745	ENSHCOG00000001242	-	65	44.134
ENSHCOG00000003041	-	92	42.308	ENSHCOG00000001245	-	71	44.144
ENSHCOG00000003041	-	95	38.889	ENSHCOG00000002898	-	52	45.833
ENSHCOG00000003041	-	93	46.073	ENSHCOG00000003021	-	57	51.124
ENSHCOG00000003041	-	93	42.966	ENSHCOG00000021073	-	77	47.826
ENSHCOG00000003041	-	93	50.000	ENSHCOG00000011411	-	89	48.684
ENSHCOG00000003041	-	93	45.833	ENSHCOG00000020725	-	73	47.904
ENSHCOG00000003041	-	89	36.538	ENSHCOG00000016704	scrt1b	62	37.647
ENSHCOG00000003041	-	90	42.857	ENSHCOG00000017437	-	80	41.026
ENSHCOG00000003041	-	93	47.464	ENSHCOG00000015425	-	84	47.087
ENSHCOG00000003041	-	90	42.405	ENSHCOG00000008550	-	59	48.193
ENSHCOG00000003041	-	92	45.174	ENSHCOG00000020848	-	64	48.370
ENSHCOG00000003041	-	90	44.681	ENSHCOG00000002969	-	58	44.681
ENSHCOG00000003041	-	93	40.777	ENSHCOG00000008181	-	75	40.777
ENSHCOG00000003041	-	93	48.205	ENSHCOG00000001883	-	86	51.412
ENSHCOG00000003041	-	85	39.091	ENSHCOG00000003407	snai1a	51	39.623
ENSHCOG00000003041	-	95	44.981	ENSHCOG00000001638	-	73	48.980
ENSHCOG00000003041	-	90	45.402	ENSHCOG00000001423	-	51	46.341
ENSHCOG00000003041	-	93	46.622	ENSHCOG00000003085	-	69	46.442
ENSHCOG00000003041	-	89	43.939	ENSHCOG00000015005	-	52	47.561
ENSHCOG00000003041	-	92	44.545	ENSHCOG00000015000	-	87	44.681
ENSHCOG00000003041	-	94	45.455	ENSHCOG00000001338	-	92	48.718
ENSHCOG00000003041	-	94	55.385	ENSHCOG00000007664	-	97	52.663
ENSHCOG00000003041	-	92	44.882	ENSHCOG00000001629	-	62	47.917
ENSHCOG00000003041	-	90	37.688	ENSHCOG00000000800	-	86	42.236
ENSHCOG00000003041	-	91	47.561	ENSHCOG00000018977	-	61	44.103
ENSHCOG00000003041	-	93	34.767	ENSHCOG00000018972	znf710b	50	38.144
ENSHCOG00000003041	-	95	41.463	ENSHCOG00000020984	-	76	47.541
ENSHCOG00000003041	-	96	43.043	ENSHCOG00000001272	-	96	46.667
ENSHCOG00000003041	-	92	38.989	ENSHCOG00000015231	-	63	40.566
ENSHCOG00000003041	-	96	37.952	ENSHCOG00000015237	-	71	46.541
ENSHCOG00000003041	-	97	50.000	ENSHCOG00000001942	-	95	48.588
ENSHCOG00000003041	-	94	44.860	ENSHCOG00000013713	gfi1b	56	43.925
ENSHCOG00000003041	-	92	51.042	ENSHCOG00000015484	-	81	51.042
ENSHCOG00000003041	-	94	34.286	ENSHCOG00000014890	znf646	80	34.286
ENSHCOG00000003041	-	97	37.500	ENSHCOG00000014891	-	51	46.667
ENSHCOG00000003041	-	90	42.405	ENSHCOG00000001873	-	59	48.193
ENSHCOG00000003041	-	89	47.260	ENSHCOG00000009009	-	60	50.365
ENSHCOG00000003041	-	89	47.177	ENSHCOG00000008028	-	82	49.727
ENSHCOG00000003041	-	92	44.118	ENSHCOG00000014713	-	99	46.781
ENSHCOG00000003041	-	93	40.984	ENSHCOG00000000947	-	72	46.061
ENSHCOG00000003041	-	93	44.545	ENSHCOG00000015438	-	50	47.396
ENSHCOG00000003041	-	95	40.336	ENSHCOG00000012131	prdm5	74	46.067
ENSHCOG00000003041	-	92	45.122	ENSHCOG00000020856	-	84	46.995
ENSHCOG00000003041	-	98	40.367	ENSHCOG00000010282	znf236	71	40.367
ENSHCOG00000003041	-	89	41.954	ENSHCOG00000020924	-	73	43.636
ENSHCOG00000003041	-	92	53.226	ENSHCOG00000008205	-	81	53.226
ENSHCOG00000003041	-	96	44.061	ENSHCOG00000007681	-	83	49.438
ENSHCOG00000003041	-	97	41.989	ENSHCOG00000019458	-	57	46.154
ENSHCOG00000003041	-	89	36.667	ENSHCOG00000016337	si:ch211-216l23.1	65	35.455
ENSHCOG00000003041	-	92	45.161	ENSHCOG00000008590	gfi1ab	56	45.161
ENSHCOG00000003041	-	97	46.400	ENSHCOG00000012662	-	83	48.913
ENSHCOG00000003041	-	88	54.237	ENSHCOG00000001300	-	72	54.237
ENSHCOG00000003041	-	95	50.000	ENSHCOG00000001308	-	68	52.273
ENSHCOG00000003041	-	92	47.716	ENSHCOG00000019465	-	69	50.857
ENSHCOG00000003041	-	92	48.729	ENSHCOG00000019385	-	75	48.729
ENSHCOG00000003041	-	89	44.828	ENSHCOG00000019388	-	66	46.746
ENSHCOG00000003041	-	95	41.899	ENSHCOG00000014874	-	68	45.860
ENSHCOG00000003041	-	99	46.400	ENSHCOG00000020972	-	96	47.083
ENSHCOG00000003041	-	96	44.487	ENSHCOG00000019481	-	69	50.270
ENSHCOG00000003041	-	92	50.485	ENSHCOG00000014999	-	52	50.485
ENSHCOG00000003041	-	89	46.753	ENSHCOG00000020670	-	74	50.000
ENSHCOG00000003041	-	92	52.475	ENSHCOG00000015355	-	99	47.778
ENSHCOG00000003041	-	89	42.667	ENSHCOG00000016179	-	53	35.507
ENSHCOG00000003041	-	92	47.541	ENSHCOG00000015497	-	74	51.190
ENSHCOG00000003041	-	94	54.545	ENSHCOG00000014881	-	71	54.545
ENSHCOG00000003041	-	98	43.678	ENSHCOG00000014887	-	75	43.678
ENSHCOG00000003041	-	95	47.059	ENSHCOG00000011433	-	79	50.575
ENSHCOG00000003041	-	93	44.966	ENSHCOG00000011432	-	94	44.966
ENSHCOG00000003041	-	92	48.305	ENSHCOG00000015441	-	69	50.259
ENSHCOG00000003041	-	96	42.759	ENSHCOG00000019438	-	87	44.954
ENSHCOG00000003041	-	93	42.623	ENSHCOG00000001238	-	92	42.623
ENSHCOG00000003041	-	93	43.655	ENSHCOG00000015010	-	58	49.630
ENSHCOG00000003041	-	92	46.809	ENSHCOG00000000138	-	69	45.833
ENSHCOG00000003041	-	91	38.037	ENSHCOG00000010332	-	74	37.888
ENSHCOG00000003041	-	98	43.373	ENSHCOG00000008213	-	68	43.421
ENSHCOG00000003041	-	93	46.497	ENSHCOG00000001870	-	53	46.497
ENSHCOG00000003041	-	99	33.577	ENSHCOG00000001875	zbtb41	51	41.250
ENSHCOG00000003041	-	92	47.748	ENSHCOG00000008742	-	75	47.748
ENSHCOG00000003041	-	94	48.148	ENSHCOG00000000517	-	75	48.148
ENSHCOG00000003041	-	93	36.039	ENSHCOG00000000511	-	68	42.373
ENSHCOG00000003041	-	90	43.564	ENSHCOG00000001313	-	63	43.609
ENSHCOG00000003041	-	95	41.463	ENSHCOG00000001318	-	99	44.865
ENSHCOG00000003041	-	92	49.123	ENSHCOG00000019006	-	52	49.123
ENSHCOG00000003041	-	92	47.710	ENSHCOG00000019512	-	92	51.613
ENSHCOG00000003041	-	93	49.505	ENSHCOG00000019497	-	76	50.820
ENSHCOG00000003041	-	97	40.502	ENSHCOG00000014986	-	85	47.059
ENSHCOG00000003041	-	86	46.602	ENSHCOG00000001292	-	66	46.067
ENSHCOG00000003041	-	89	41.333	ENSHCOG00000008116	scrt2	55	31.771
ENSHCOG00000003041	-	95	52.083	ENSHCOG00000008168	-	97	51.075
ENSHCOG00000003041	-	98	46.914	ENSHCOG00000012617	-	83	49.123
ENSHCOG00000003041	-	89	40.784	ENSHCOG00000007358	-	77	47.753
ENSHCOG00000003041	-	93	44.578	ENSHCOG00000007351	-	78	46.698
ENSHCOG00000003041	-	93	42.857	ENSHCOG00000014786	-	98	45.882
ENSHCOG00000003041	-	89	45.070	ENSHCOG00000014781	-	60	45.122
ENSHCOG00000003041	-	91	49.020	ENSHCOG00000010212	-	59	42.963
ENSHCOG00000003041	-	96	47.568	ENSHCOG00000007485	-	93	51.075
ENSHCOG00000003041	-	93	41.256	ENSHCOG00000001345	-	79	46.111
ENSHCOG00000003041	-	95	43.750	ENSHCOG00000016455	e4f1	50	43.750
ENSHCOG00000003041	-	98	41.333	ENSHCOG00000008906	-	82	43.684
ENSHCOG00000003041	-	90	50.000	ENSHCOG00000015459	-	50	43.750
ENSHCOG00000003041	-	90	44.934	ENSHCOG00000001793	-	81	44.934
ENSHCOG00000003041	-	92	50.000	ENSHCOG00000020879	-	66	52.593
ENSHCOG00000003041	-	89	45.122	ENSHCOG00000008133	-	59	43.721
ENSHCOG00000003041	-	95	37.370	ENSHCOG00000015241	-	66	41.558
ENSHCOG00000003041	-	94	41.007	ENSHCOG00000015246	-	65	41.176
ENSHCOG00000003041	-	76	40.449	ENSHCOG00000007100	zgc:171929	78	43.750
ENSHCOG00000003041	-	92	43.333	ENSHCOG00000008686	-	93	34.400
ENSHCOG00000003041	-	93	42.629	ENSHCOG00000020909	-	84	48.691
ENSHCOG00000003041	-	93	31.122	ENSHCOG00000011612	zfat	64	31.122
ENSHCOG00000003041	-	98	36.162	ENSHCOG00000006286	ZNF319	87	43.151
ENSHCOG00000003041	-	99	32.099	ENSHCOG00000008227	-	56	32.099
ENSHCOG00000003041	-	92	48.305	ENSHCOG00000001448	-	60	48.305
ENSHCOG00000003041	-	95	43.333	ENSHCOG00000013455	-	85	47.977
ENSHCOG00000003041	-	92	41.833	ENSHCOG00000020846	-	77	50.000
ENSHCOG00000003041	-	90	45.175	ENSHCOG00000019001	-	96	53.107
ENSHCOG00000003041	-	92	47.143	ENSHCOG00000017456	-	93	43.915
ENSHCOG00000003041	-	94	45.087	ENSHCOG00000012175	-	97	46.739
ENSHCOG00000003041	-	92	43.820	ENSHCOG00000007464	-	58	41.139
ENSHCOG00000003041	-	90	40.693	ENSHCOG00000012592	-	53	46.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003041	-	96	84.698	ENSAPOG00000002213	-	90	85.992	Acanthochromis_polyacanthus
ENSHCOG00000003041	-	91	89.759	ENSACIG00000013163	-	79	89.759	Amphilophus_citrinellus
ENSHCOG00000003041	-	96	40.278	ENSACIG00000013149	-	79	45.714	Amphilophus_citrinellus
ENSHCOG00000003041	-	97	83.275	ENSAOCG00000013124	-	68	83.275	Amphiprion_ocellaris
ENSHCOG00000003041	-	97	83.275	ENSAPEG00000009997	-	71	83.275	Amphiprion_percula
ENSHCOG00000003041	-	95	86.347	ENSATEG00000004127	-	96	92.500	Anabas_testudineus
ENSHCOG00000003041	-	96	85.818	ENSACLG00000005708	-	68	85.818	Astatotilapia_calliptera
ENSHCOG00000003041	-	93	80.741	ENSCVAG00000014734	-	97	80.741	Cyprinodon_variegatus
ENSHCOG00000003041	-	92	71.084	ENSFHEG00000014060	-	58	75.833	Fundulus_heteroclitus
ENSHCOG00000003041	-	92	67.139	ENSGMOG00000017526	-	99	74.286	Gadus_morhua
ENSHCOG00000003041	-	96	83.636	ENSGAFG00000011174	-	66	83.636	Gambusia_affinis
ENSHCOG00000003041	-	98	92.340	ENSGACG00000019550	-	81	92.340	Gasterosteus_aculeatus
ENSHCOG00000003041	-	96	85.818	ENSHBUG00000006662	-	68	85.818	Haplochromis_burtoni
ENSHCOG00000003041	-	97	83.032	ENSKMAG00000009979	-	66	90.123	Kryptolebias_marmoratus
ENSHCOG00000003041	-	96	83.333	ENSLBEG00000010165	-	99	79.933	Labrus_bergylta
ENSHCOG00000003041	-	94	82.186	ENSMAMG00000006312	-	93	85.171	Mastacembelus_armatus
ENSHCOG00000003041	-	96	85.818	ENSMZEG00005013913	-	68	85.818	Maylandia_zebra
ENSHCOG00000003041	-	94	84.701	ENSMMOG00000011282	-	92	83.712	Mola_mola
ENSHCOG00000003041	-	95	83.929	ENSMALG00000000494	-	66	91.975	Monopterus_albus
ENSHCOG00000003041	-	96	61.232	ENSNBRG00000007602	-	87	68.664	Neolamprologus_brichardi
ENSHCOG00000003041	-	96	62.406	ENSONIG00000003856	-	100	64.394	Oreochromis_niloticus
ENSHCOG00000003041	-	97	84.411	ENSORLG00000010117	-	86	84.411	Oryzias_latipes
ENSHCOG00000003041	-	97	81.884	ENSORLG00020000219	-	72	88.272	Oryzias_latipes_hni
ENSHCOG00000003041	-	97	82.246	ENSORLG00015000258	-	98	79.051	Oryzias_latipes_hsok
ENSHCOG00000003041	-	97	81.884	ENSOMEG00000018262	-	92	86.420	Oryzias_melastigma
ENSHCOG00000003041	-	95	72.332	ENSPFOG00000013455	-	95	90.761	Poecilia_formosa
ENSHCOG00000003041	-	98	83.273	ENSPLAG00000004027	-	75	82.353	Poecilia_latipinna
ENSHCOG00000003041	-	98	83.636	ENSPMEG00000007589	-	69	83.636	Poecilia_mexicana
ENSHCOG00000003041	-	93	86.561	ENSPREG00000000153	-	92	84.234	Poecilia_reticulata
ENSHCOG00000003041	-	97	40.076	ENSPNYG00000007781	-	90	45.714	Pundamilia_nyererei
ENSHCOG00000003041	-	98	86.099	ENSPNYG00000007814	-	89	84.528	Pundamilia_nyererei
ENSHCOG00000003041	-	98	86.738	ENSSMAG00000021251	-	94	84.099	Scophthalmus_maximus
ENSHCOG00000003041	-	96	85.409	ENSSDUG00000013904	-	68	85.409	Seriola_dumerili
ENSHCOG00000003041	-	97	83.566	ENSSLDG00000006994	-	96	85.455	Seriola_lalandi_dorsalis
ENSHCOG00000003041	-	97	82.927	ENSSPAG00000011524	-	85	70.742	Stegastes_partitus
ENSHCOG00000003041	-	99	80.144	ENSTRUG00000015687	-	97	76.170	Takifugu_rubripes
ENSHCOG00000003041	-	94	81.919	ENSTNIG00000008242	-	100	81.919	Tetraodon_nigroviridis
ENSHCOG00000003041	-	98	78.467	ENSXCOG00000015947	-	96	80.176	Xiphophorus_couchianus
ENSHCOG00000003041	-	98	83.636	ENSXMAG00000023291	-	94	84.351	Xiphophorus_maculatus