EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003117 (Gene tree)
Gene ID: 109520416
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC109520416
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2447 bases
Position: chrKV880088.1:377140-379586
Accession: 109520416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002034	PABP	PF00658.18	3.4e-41	1	3
ENSHCOP00000002034	PABP	PF00658.18	3.4e-41	2	3
ENSHCOP00000002034	PABP	PF00658.18	3.4e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011079	-	1192	XM_019877618	ENSHCOP00000002034	216 (aa)	XP_019733177	UPI00094F2444

Gene Model

Click here to download ENSHCOG00000003117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003117	-	100	68.981	ENSAPOG00000023881	-	100	68.981	Acanthochromis_polyacanthus
ENSHCOG00000003117	-	100	68.981	ENSAOCG00000019884	-	100	68.981	Amphiprion_ocellaris
ENSHCOG00000003117	-	100	69.444	ENSAPEG00000020987	-	100	69.444	Amphiprion_percula
ENSHCOG00000003117	-	100	69.266	ENSATEG00000013831	-	100	69.266	Anabas_testudineus
ENSHCOG00000003117	-	100	68.056	ENSACLG00000027916	-	99	68.056	Astatotilapia_calliptera
ENSHCOG00000003117	-	99	56.019	ENSAMXG00000041484	-	92	56.019	Astyanax_mexicanus
ENSHCOG00000003117	-	99	66.120	ENSCSEG00000001317	-	97	66.120	Cynoglossus_semilaevis
ENSHCOG00000003117	-	99	65.421	ENSCVAG00000000578	-	98	65.421	Cyprinodon_variegatus
ENSHCOG00000003117	-	99	60.280	ENSELUG00000001731	-	84	60.280	Esox_lucius
ENSHCOG00000003117	-	99	67.290	ENSFHEG00000007741	-	98	67.290	Fundulus_heteroclitus
ENSHCOG00000003117	-	99	57.527	ENSGAFG00000012983	-	67	57.527	Gambusia_affinis
ENSHCOG00000003117	-	100	64.815	ENSHBUG00000000185	-	60	64.815	Haplochromis_burtoni
ENSHCOG00000003117	-	100	69.907	ENSKMAG00000011397	-	99	69.907	Kryptolebias_marmoratus
ENSHCOG00000003117	-	100	69.907	ENSLBEG00000027847	-	96	69.907	Labrus_bergylta
ENSHCOG00000003117	-	94	59.701	ENSLOCG00000003085	-	96	55.128	Lepisosteus_oculatus
ENSHCOG00000003117	-	100	71.296	ENSMAMG00000017628	-	100	71.296	Mastacembelus_armatus
ENSHCOG00000003117	-	99	63.388	ENSMMOG00000004490	-	90	63.388	Mola_mola
ENSHCOG00000003117	-	99	70.423	ENSMALG00000004586	-	99	70.423	Monopterus_albus
ENSHCOG00000003117	-	98	67.222	ENSNBRG00000006752	-	74	67.222	Neolamprologus_brichardi
ENSHCOG00000003117	-	94	58.911	ENSPKIG00000005307	-	93	58.879	Paramormyrops_kingsleyae
ENSHCOG00000003117	-	97	58.470	ENSPMGG00000004590	-	98	58.470	Periophthalmus_magnuspinnatus
ENSHCOG00000003117	-	99	64.953	ENSPFOG00000023453	-	100	64.953	Poecilia_formosa
ENSHCOG00000003117	-	100	64.815	ENSPLAG00000003198	-	99	64.815	Poecilia_latipinna
ENSHCOG00000003117	-	98	61.878	ENSPMEG00000022008	-	72	61.878	Poecilia_mexicana
ENSHCOG00000003117	-	100	58.333	ENSPREG00000001981	-	98	58.333	Poecilia_reticulata
ENSHCOG00000003117	-	98	66.082	ENSPNYG00000004740	-	87	66.082	Pundamilia_nyererei
ENSHCOG00000003117	-	86	44.615	ENSPNAG00000018692	-	73	44.615	Pygocentrus_nattereri
ENSHCOG00000003117	-	99	58.879	ENSSFOG00015001322	-	95	58.879	Scleropages_formosus
ENSHCOG00000003117	-	99	67.757	ENSSMAG00000008778	-	98	67.757	Scophthalmus_maximus
ENSHCOG00000003117	-	100	71.296	ENSSDUG00000015116	-	99	71.296	Seriola_dumerili
ENSHCOG00000003117	-	100	69.907	ENSSLDG00000000425	-	99	69.907	Seriola_lalandi_dorsalis
ENSHCOG00000003117	-	100	69.907	ENSSPAG00000015141	-	100	69.907	Stegastes_partitus
ENSHCOG00000003117	-	100	66.667	ENSTRUG00000021899	-	100	66.667	Takifugu_rubripes
ENSHCOG00000003117	-	100	63.889	ENSTNIG00000002576	-	100	63.889	Tetraodon_nigroviridis
ENSHCOG00000003117	-	100	53.241	ENSXCOG00000001548	-	99	53.241	Xiphophorus_couchianus
ENSHCOG00000003117	-	100	64.815	ENSXMAG00000021863	-	99	64.815	Xiphophorus_maculatus