EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000003119 (Gene tree)
Gene ID: -
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11383 bases
Position: chrKV879792.1:1223864-1235246
Accession: 109531597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002023	RRM_1	PF00076.22	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011112	-	4407	XM_019895967	ENSHCOP00000002023	1468 (aa)	XP_019751526	-

Gene Model

Click here to download ENSHCOG00000003119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003119's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000003119	setd1a	67	61.846	ENSHCOG00000001951	setd1ba	60	62.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003119	setd1a	84	94.030	ENSAPOG00000018002	setd1a	66	91.346	Acanthochromis_polyacanthus
ENSHCOG00000003119	setd1a	100	66.376	ENSACIG00000007144	setd1a	100	66.897	Amphilophus_citrinellus
ENSHCOG00000003119	setd1a	99	85.920	ENSAOCG00000003663	setd1a	76	85.511	Amphiprion_ocellaris
ENSHCOG00000003119	setd1a	99	75.591	ENSATEG00000022798	setd1a	80	75.591	Anabas_testudineus
ENSHCOG00000003119	setd1a	76	41.424	ENSACAG00000007606	-	61	65.323	Anolis_carolinensis
ENSHCOG00000003119	setd1a	79	63.424	ENSANAG00000021698	-	73	63.424	Aotus_nancymaae
ENSHCOG00000003119	setd1a	100	85.511	ENSACLG00000024747	setd1a	77	85.511	Astatotilapia_calliptera
ENSHCOG00000003119	setd1a	86	80.363	ENSAMXG00000009497	setd1a	70	75.207	Astyanax_mexicanus
ENSHCOG00000003119	setd1a	52	57.325	ENSTSYG00000014425	-	68	57.325	Carlito_syrichta
ENSHCOG00000003119	setd1a	81	57.759	ENSCAPG00000006491	-	70	57.759	Cavia_aperea
ENSHCOG00000003119	setd1a	78	67.984	ENSCPBG00000010830	-	74	67.984	Chrysemys_picta_bellii
ENSHCOG00000003119	setd1a	64	80.952	ENSCANG00000038478	-	70	63.462	Colobus_angolensis_palliatus
ENSHCOG00000003119	setd1a	99	86.207	ENSCSEG00000021605	setd1a	76	85.795	Cynoglossus_semilaevis
ENSHCOG00000003119	setd1a	93	92.500	ENSCVAG00000011672	setd1a	72	85.143	Cyprinodon_variegatus
ENSHCOG00000003119	setd1a	98	81.682	ENSDARG00000060030	setd1a	73	76.860	Danio_rerio
ENSHCOG00000003119	setd1a	63	80.000	ENSECAG00000015162	SETD1A	68	63.077	Equus_caballus
ENSHCOG00000003119	setd1a	96	79.006	ENSELUG00000020261	setd1a	70	79.282	Esox_lucius
ENSHCOG00000003119	setd1a	99	71.958	ENSFHEG00000023258	setd1a	100	63.445	Fundulus_heteroclitus
ENSHCOG00000003119	setd1a	79	77.193	ENSGAFG00000011698	setd1a	93	64.247	Gambusia_affinis
ENSHCOG00000003119	setd1a	87	90.717	ENSGACG00000013688	setd1a	80	90.717	Gasterosteus_aculeatus
ENSHCOG00000003119	setd1a	83	58.589	ENSGAGG00000010781	-	66	67.194	Gopherus_agassizii
ENSHCOG00000003119	setd1a	100	85.511	ENSHBUG00000008893	setd1a	77	85.795	Haplochromis_burtoni
ENSHCOG00000003119	setd1a	86	56.369	ENSHGLG00000014238	-	78	56.369	Heterocephalus_glaber_female
ENSHCOG00000003119	setd1a	58	81.496	ENSHGLG00100010551	-	78	81.496	Heterocephalus_glaber_male
ENSHCOG00000003119	setd1a	91	82.335	ENSIPUG00000007413	setd1a	73	77.473	Ictalurus_punctatus
ENSHCOG00000003119	setd1a	96	85.632	ENSKMAG00000009484	setd1a	77	84.943	Kryptolebias_marmoratus
ENSHCOG00000003119	setd1a	95	84.659	ENSLBEG00000004399	setd1a	74	84.659	Labrus_bergylta
ENSHCOG00000003119	setd1a	64	80.952	ENSMNEG00000032572	-	74	63.813	Macaca_nemestrina
ENSHCOG00000003119	setd1a	100	85.795	ENSMZEG00005023141	setd1a	77	85.795	Maylandia_zebra
ENSHCOG00000003119	setd1a	71	79.730	ENSMAUG00000008959	-	55	58.427	Mesocricetus_auratus
ENSHCOG00000003119	setd1a	77	85.380	ENSMALG00000007401	setd1a	64	85.260	Monopterus_albus
ENSHCOG00000003119	setd1a	67	79.730	MGP_CAROLIEiJ_G0030519	-	100	71.066	Mus_caroli
ENSHCOG00000003119	setd1a	64	79.730	MGP_PahariEiJ_G0013726	-	100	71.066	Mus_pahari
ENSHCOG00000003119	setd1a	100	83.714	ENSNBRG00000004760	setd1a	82	83.714	Neolamprologus_brichardi
ENSHCOG00000003119	setd1a	79	59.144	ENSNLEG00000016072	-	68	58.846	Nomascus_leucogenys
ENSHCOG00000003119	setd1a	56	79.452	ENSMEUG00000003396	-	88	54.140	Notamacropus_eugenii
ENSHCOG00000003119	setd1a	80	63.813	ENSOPRG00000016034	-	76	63.462	Ochotona_princeps
ENSHCOG00000003119	setd1a	84	89.836	ENSONIG00000009854	setd1a	74	80.000	Oreochromis_niloticus
ENSHCOG00000003119	setd1a	73	91.304	ENSORLG00000002213	setd1a	56	85.470	Oryzias_latipes
ENSHCOG00000003119	setd1a	95	91.304	ENSORLG00020011897	setd1a	73	85.470	Oryzias_latipes_hni
ENSHCOG00000003119	setd1a	73	91.304	ENSORLG00015004826	setd1a	56	85.470	Oryzias_latipes_hsok
ENSHCOG00000003119	setd1a	92	90.909	ENSOMEG00000019732	setd1a	72	86.325	Oryzias_melastigma
ENSHCOG00000003119	setd1a	88	47.495	ENSOGAG00000028006	-	70	56.275	Otolemur_garnettii
ENSHCOG00000003119	setd1a	56	80.405	ENSOARG00000008207	-	54	80.405	Ovis_aries
ENSHCOG00000003119	setd1a	52	81.443	ENSPPAG00000030470	-	57	81.443	Pan_paniscus
ENSHCOG00000003119	setd1a	70	81.369	ENSPTIG00000010871	-	74	80.827	Panthera_tigris_altaica
ENSHCOG00000003119	setd1a	51	76.923	ENSPSIG00000005027	-	64	78.188	Pelodiscus_sinensis
ENSHCOG00000003119	setd1a	52	76.821	ENSPCIG00000016725	-	75	60.156	Phascolarctos_cinereus
ENSHCOG00000003119	setd1a	94	90.244	ENSPFOG00000013669	setd1a	75	85.795	Poecilia_formosa
ENSHCOG00000003119	setd1a	99	86.494	ENSPLAG00000009294	setd1a	77	85.795	Poecilia_latipinna
ENSHCOG00000003119	setd1a	98	86.207	ENSPMEG00000005864	setd1a	77	85.511	Poecilia_mexicana
ENSHCOG00000003119	setd1a	99	86.455	ENSPREG00000010201	setd1a	73	85.755	Poecilia_reticulata
ENSHCOG00000003119	setd1a	51	92.233	ENSPPYG00000007296	-	71	92.233	Pongo_abelii
ENSHCOG00000003119	setd1a	55	78.173	ENSPCAG00000014351	-	60	78.173	Procavia_capensis
ENSHCOG00000003119	setd1a	80	69.903	ENSPVAG00000011049	-	65	69.903	Pteropus_vampyrus
ENSHCOG00000003119	setd1a	100	85.511	ENSPNYG00000014139	setd1a	77	85.795	Pundamilia_nyererei
ENSHCOG00000003119	setd1a	91	80.597	ENSPNAG00000019165	setd1a	76	74.795	Pygocentrus_nattereri
ENSHCOG00000003119	setd1a	63	81.443	ENSRBIG00000033047	-	65	81.443	Rhinopithecus_bieti
ENSHCOG00000003119	setd1a	63	81.443	ENSRROG00000040062	-	57	81.443	Rhinopithecus_roxellana
ENSHCOG00000003119	setd1a	67	60.079	ENSSHAG00000010784	-	83	60.079	Sarcophilus_harrisii
ENSHCOG00000003119	setd1a	88	79.394	ENSSFOG00015007013	setd1a	53	75.424	Scleropages_formosus
ENSHCOG00000003119	setd1a	99	86.494	ENSSMAG00000008846	setd1a	79	85.795	Scophthalmus_maximus
ENSHCOG00000003119	setd1a	95	86.494	ENSSDUG00000022142	setd1a	76	86.080	Seriola_dumerili
ENSHCOG00000003119	setd1a	95	86.494	ENSSLDG00000018250	setd1a	76	86.080	Seriola_lalandi_dorsalis
ENSHCOG00000003119	setd1a	60	72.775	ENSSARG00000005591	-	57	57.143	Sorex_araneus
ENSHCOG00000003119	setd1a	99	86.782	ENSSPAG00000007822	setd1a	77	86.080	Stegastes_partitus
ENSHCOG00000003119	setd1a	66	87.069	ENSTRUG00000008953	setd1a	57	86.364	Takifugu_rubripes
ENSHCOG00000003119	setd1a	92	75.394	ENSTNIG00000014930	setd1a	86	74.922	Tetraodon_nigroviridis
ENSHCOG00000003119	setd1a	78	57.404	ENSVVUG00000027687	-	83	57.325	Vulpes_vulpes
ENSHCOG00000003119	setd1a	70	64.220	ENSXETG00000001921	setd1a	59	57.258	Xenopus_tropicalis
ENSHCOG00000003119	setd1a	91	86.286	ENSXCOG00000017585	setd1a	85	85.593	Xiphophorus_couchianus
ENSHCOG00000003119	setd1a	99	86.494	ENSXMAG00000008021	setd1a	76	85.795	Xiphophorus_maculatus