EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003148 (Gene tree)
Gene ID: 109517083
Gene Symbol: rbm18
Alias: zgc:73332
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 11211 bases
Position: chrKV879994.1:384150-395360
Accession: 109517083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018525	RRM_1	PF00076.22	2.2e-15	1	1
ENSHCOP00000018527	RRM_1	PF00076.22	2.4e-15	1	1
ENSHCOP00000002061	RRM_1	PF00076.22	2.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000011052	-	1079	XM_019872014	ENSHCOP00000018525	191 (aa)	XP_019727573	UPI00094EFA77
ENSHCOT00000011038	-	954	XM_019872011	ENSHCOP00000018527	197 (aa)	XP_019727570	UPI00094EB870
ENSHCOT00000011049	-	594	-	ENSHCOP00000002061	197 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000003148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003148	rbm18	93	67.935	ENSG00000119446	RBM18	95	67.935	Homo_sapiens
ENSHCOG00000003148	rbm18	100	91.500	ENSAPOG00000001987	rbm18	100	91.500	Acanthochromis_polyacanthus
ENSHCOG00000003148	rbm18	93	67.935	ENSAMEG00000000772	RBM18	95	67.935	Ailuropoda_melanoleuca
ENSHCOG00000003148	rbm18	95	83.249	ENSACIG00000005001	rbm18	99	84.772	Amphilophus_citrinellus
ENSHCOG00000003148	rbm18	100	90.050	ENSAOCG00000006762	rbm18	100	90.050	Amphiprion_ocellaris
ENSHCOG00000003148	rbm18	100	90.050	ENSAPEG00000007972	rbm18	100	90.050	Amphiprion_percula
ENSHCOG00000003148	rbm18	100	88.060	ENSATEG00000019164	rbm18	100	88.060	Anabas_testudineus
ENSHCOG00000003148	rbm18	93	67.935	ENSANAG00000035441	RBM18	95	67.935	Aotus_nancymaae
ENSHCOG00000003148	rbm18	100	89.552	ENSACLG00000019848	rbm18	100	89.552	Astatotilapia_calliptera
ENSHCOG00000003148	rbm18	100	76.382	ENSAMXG00000035574	rbm18	100	76.382	Astyanax_mexicanus
ENSHCOG00000003148	rbm18	93	67.391	ENSBTAG00000016367	RBM18	95	67.391	Bos_taurus
ENSHCOG00000003148	rbm18	93	67.935	ENSCJAG00000046355	RBM18	95	67.935	Callithrix_jacchus
ENSHCOG00000003148	rbm18	93	67.935	ENSCAFG00000030041	RBM18	95	67.935	Canis_familiaris
ENSHCOG00000003148	rbm18	93	67.935	ENSCAFG00020015174	RBM18	95	67.935	Canis_lupus_dingo
ENSHCOG00000003148	rbm18	93	67.391	ENSCHIG00000026444	RBM18	95	67.391	Capra_hircus
ENSHCOG00000003148	rbm18	93	67.935	ENSTSYG00000030353	RBM18	95	67.935	Carlito_syrichta
ENSHCOG00000003148	rbm18	93	67.391	ENSCPOG00000038004	RBM18	95	67.391	Cavia_porcellus
ENSHCOG00000003148	rbm18	93	67.935	ENSCCAG00000035467	RBM18	95	67.935	Cebus_capucinus
ENSHCOG00000003148	rbm18	93	67.935	ENSCATG00000035634	RBM18	95	67.935	Cercocebus_atys
ENSHCOG00000003148	rbm18	93	67.935	ENSCLAG00000010773	RBM18	95	67.935	Chinchilla_lanigera
ENSHCOG00000003148	rbm18	72	70.213	ENSCSAG00000013373	RBM18	97	70.213	Chlorocebus_sabaeus
ENSHCOG00000003148	rbm18	77	68.212	ENSCHOG00000001341	RBM18	96	68.212	Choloepus_hoffmanni
ENSHCOG00000003148	rbm18	95	67.914	ENSCPBG00000009885	RBM18	95	67.914	Chrysemys_picta_bellii
ENSHCOG00000003148	rbm18	85	35.938	ENSCING00000010157	-	87	36.872	Ciona_intestinalis
ENSHCOG00000003148	rbm18	56	33.333	ENSCSAVG00000000409	-	83	33.333	Ciona_savignyi
ENSHCOG00000003148	rbm18	93	68.478	ENSCANG00000029590	RBM18	95	68.478	Colobus_angolensis_palliatus
ENSHCOG00000003148	rbm18	93	67.935	ENSCGRG00001014593	Rbm18	95	67.935	Cricetulus_griseus_chok1gshd
ENSHCOG00000003148	rbm18	93	65.217	ENSCGRG00000012247	Rbm18	90	70.303	Cricetulus_griseus_crigri
ENSHCOG00000003148	rbm18	100	89.055	ENSCSEG00000017587	rbm18	100	89.055	Cynoglossus_semilaevis
ENSHCOG00000003148	rbm18	100	86.070	ENSCVAG00000012436	rbm18	87	86.070	Cyprinodon_variegatus
ENSHCOG00000003148	rbm18	100	75.879	ENSDARG00000044255	rbm18	100	75.879	Danio_rerio
ENSHCOG00000003148	rbm18	93	67.935	ENSDNOG00000031658	RBM18	95	67.935	Dasypus_novemcinctus
ENSHCOG00000003148	rbm18	93	67.935	ENSDORG00000028540	Rbm18	95	67.935	Dipodomys_ordii
ENSHCOG00000003148	rbm18	72	37.500	FBgn0030571	CG14414	77	36.686	Drosophila_melanogaster
ENSHCOG00000003148	rbm18	93	60.326	ENSETEG00000009832	RBM18	95	60.326	Echinops_telfairi
ENSHCOG00000003148	rbm18	88	54.023	ENSEBUG00000009127	rbm18	89	54.023	Eptatretus_burgeri
ENSHCOG00000003148	rbm18	93	67.935	ENSEASG00005021084	RBM18	95	67.935	Equus_asinus_asinus
ENSHCOG00000003148	rbm18	93	67.935	ENSECAG00000024639	RBM18	95	67.935	Equus_caballus
ENSHCOG00000003148	rbm18	93	53.261	ENSEEUG00000002828	RBM18	95	53.261	Erinaceus_europaeus
ENSHCOG00000003148	rbm18	98	80.412	ENSELUG00000005876	rbm18	96	81.183	Esox_lucius
ENSHCOG00000003148	rbm18	93	67.935	ENSFCAG00000037774	RBM18	95	67.935	Felis_catus
ENSHCOG00000003148	rbm18	77	68.212	ENSFALG00000001940	RBM18	92	68.456	Ficedula_albicollis
ENSHCOG00000003148	rbm18	93	67.391	ENSFDAG00000012679	RBM18	95	67.391	Fukomys_damarensis
ENSHCOG00000003148	rbm18	99	86.432	ENSFHEG00000012457	rbm18	99	86.432	Fundulus_heteroclitus
ENSHCOG00000003148	rbm18	100	78.218	ENSGMOG00000019735	rbm18	100	78.218	Gadus_morhua
ENSHCOG00000003148	rbm18	93	67.760	ENSGALG00000028167	RBM18	95	67.391	Gallus_gallus
ENSHCOG00000003148	rbm18	100	86.567	ENSGAFG00000007767	rbm18	100	86.567	Gambusia_affinis
ENSHCOG00000003148	rbm18	100	89.552	ENSGACG00000017348	rbm18	99	89.552	Gasterosteus_aculeatus
ENSHCOG00000003148	rbm18	98	66.495	ENSGAGG00000018318	RBM18	98	66.495	Gopherus_agassizii
ENSHCOG00000003148	rbm18	93	67.935	ENSGGOG00000011052	RBM18	95	67.935	Gorilla_gorilla
ENSHCOG00000003148	rbm18	100	89.552	ENSHBUG00000015237	rbm18	100	89.552	Haplochromis_burtoni
ENSHCOG00000003148	rbm18	93	67.391	ENSHGLG00000011073	RBM18	95	67.391	Heterocephalus_glaber_female
ENSHCOG00000003148	rbm18	93	67.391	ENSHGLG00100005536	RBM18	95	67.391	Heterocephalus_glaber_male
ENSHCOG00000003148	rbm18	93	54.891	ENSHGLG00100006247	-	95	54.891	Heterocephalus_glaber_male
ENSHCOG00000003148	rbm18	100	73.367	ENSIPUG00000021512	rbm18	83	73.367	Ictalurus_punctatus
ENSHCOG00000003148	rbm18	90	64.045	ENSSTOG00000032266	-	94	64.045	Ictidomys_tridecemlineatus
ENSHCOG00000003148	rbm18	93	67.935	ENSSTOG00000022388	-	95	67.935	Ictidomys_tridecemlineatus
ENSHCOG00000003148	rbm18	93	65.217	ENSJJAG00000010974	-	95	65.217	Jaculus_jaculus
ENSHCOG00000003148	rbm18	68	73.134	ENSJJAG00000009581	-	83	73.134	Jaculus_jaculus
ENSHCOG00000003148	rbm18	100	89.552	ENSKMAG00000010679	rbm18	86	89.552	Kryptolebias_marmoratus
ENSHCOG00000003148	rbm18	100	89.055	ENSLBEG00000023896	rbm18	100	89.055	Labrus_bergylta
ENSHCOG00000003148	rbm18	69	72.263	ENSLACG00000009920	RBM18	99	72.263	Latimeria_chalumnae
ENSHCOG00000003148	rbm18	93	67.391	ENSLAFG00000012134	RBM18	95	67.391	Loxodonta_africana
ENSHCOG00000003148	rbm18	93	67.935	ENSMFAG00000000443	RBM18	95	67.935	Macaca_fascicularis
ENSHCOG00000003148	rbm18	93	67.935	ENSMMUG00000011455	RBM18	95	67.935	Macaca_mulatta
ENSHCOG00000003148	rbm18	93	67.935	ENSMNEG00000035374	RBM18	95	67.935	Macaca_nemestrina
ENSHCOG00000003148	rbm18	93	67.935	ENSMLEG00000043105	RBM18	95	67.935	Mandrillus_leucophaeus
ENSHCOG00000003148	rbm18	100	88.557	ENSMAMG00000009239	rbm18	100	88.557	Mastacembelus_armatus
ENSHCOG00000003148	rbm18	100	88.557	ENSMZEG00005017921	rbm18	100	88.557	Maylandia_zebra
ENSHCOG00000003148	rbm18	89	62.712	ENSMGAG00000016888	RBM18	97	62.857	Meleagris_gallopavo
ENSHCOG00000003148	rbm18	93	67.935	ENSMAUG00000021365	Rbm18	95	67.935	Mesocricetus_auratus
ENSHCOG00000003148	rbm18	93	68.478	ENSMICG00000046793	RBM18	95	68.478	Microcebus_murinus
ENSHCOG00000003148	rbm18	93	67.391	ENSMOCG00000000613	Rbm18	95	67.391	Microtus_ochrogaster
ENSHCOG00000003148	rbm18	100	75.490	ENSMMOG00000021319	rbm18	100	75.490	Mola_mola
ENSHCOG00000003148	rbm18	77	69.536	ENSMODG00000019688	RBM18	96	69.799	Monodelphis_domestica
ENSHCOG00000003148	rbm18	100	90.050	ENSMALG00000017766	rbm18	100	90.050	Monopterus_albus
ENSHCOG00000003148	rbm18	93	67.935	MGP_CAROLIEiJ_G0023488	Rbm18	95	67.935	Mus_caroli
ENSHCOG00000003148	rbm18	93	67.935	ENSMUSG00000026889	Rbm18	95	67.935	Mus_musculus
ENSHCOG00000003148	rbm18	93	67.391	MGP_PahariEiJ_G0024945	Rbm18	95	67.391	Mus_pahari
ENSHCOG00000003148	rbm18	93	67.935	MGP_SPRETEiJ_G0024405	Rbm18	95	67.935	Mus_spretus
ENSHCOG00000003148	rbm18	93	67.935	ENSMPUG00000007246	RBM18	95	67.935	Mustela_putorius_furo
ENSHCOG00000003148	rbm18	93	67.935	ENSMLUG00000004794	-	95	67.935	Myotis_lucifugus
ENSHCOG00000003148	rbm18	93	67.935	ENSMLUG00000013224	-	95	67.935	Myotis_lucifugus
ENSHCOG00000003148	rbm18	93	67.935	ENSNGAG00000000041	Rbm18	95	67.935	Nannospalax_galili
ENSHCOG00000003148	rbm18	100	89.552	ENSNBRG00000021128	rbm18	100	89.552	Neolamprologus_brichardi
ENSHCOG00000003148	rbm18	93	67.935	ENSNLEG00000017174	RBM18	95	67.935	Nomascus_leucogenys
ENSHCOG00000003148	rbm18	93	54.348	ENSMEUG00000015704	RBM18	96	54.348	Notamacropus_eugenii
ENSHCOG00000003148	rbm18	93	67.391	ENSOPRG00000010381	RBM18	95	67.391	Ochotona_princeps
ENSHCOG00000003148	rbm18	93	67.391	ENSODEG00000002055	RBM18	95	67.391	Octodon_degus
ENSHCOG00000003148	rbm18	100	88.557	ENSONIG00000003723	rbm18	100	88.557	Oreochromis_niloticus
ENSHCOG00000003148	rbm18	93	67.213	ENSOANG00000008200	RBM18	95	67.213	Ornithorhynchus_anatinus
ENSHCOG00000003148	rbm18	93	67.391	ENSOCUG00000008527	RBM18	95	67.391	Oryctolagus_cuniculus
ENSHCOG00000003148	rbm18	100	85.644	ENSORLG00000009962	rbm18	100	85.644	Oryzias_latipes
ENSHCOG00000003148	rbm18	100	85.644	ENSORLG00020013452	rbm18	100	85.644	Oryzias_latipes_hni
ENSHCOG00000003148	rbm18	100	85.644	ENSORLG00015001711	rbm18	99	82.412	Oryzias_latipes_hsok
ENSHCOG00000003148	rbm18	100	86.139	ENSOMEG00000001492	rbm18	100	86.139	Oryzias_melastigma
ENSHCOG00000003148	rbm18	93	67.935	ENSOGAG00000015104	RBM18	95	67.935	Otolemur_garnettii
ENSHCOG00000003148	rbm18	93	67.391	ENSOARG00000014228	RBM18	95	67.391	Ovis_aries
ENSHCOG00000003148	rbm18	93	67.935	ENSPPAG00000023355	RBM18	95	67.935	Pan_paniscus
ENSHCOG00000003148	rbm18	93	67.935	ENSPPRG00000011360	RBM18	95	67.935	Panthera_pardus
ENSHCOG00000003148	rbm18	93	67.935	ENSPTIG00000007126	RBM18	95	67.935	Panthera_tigris_altaica
ENSHCOG00000003148	rbm18	93	67.935	ENSPTRG00000021323	RBM18	95	67.935	Pan_troglodytes
ENSHCOG00000003148	rbm18	93	67.935	ENSPANG00000025845	RBM18	95	67.935	Papio_anubis
ENSHCOG00000003148	rbm18	69	79.259	ENSPKIG00000005430	rbm18	76	79.259	Paramormyrops_kingsleyae
ENSHCOG00000003148	rbm18	91	69.444	ENSPSIG00000013631	RBM18	93	68.889	Pelodiscus_sinensis
ENSHCOG00000003148	rbm18	96	87.831	ENSPMGG00000023951	rbm18	95	87.831	Periophthalmus_magnuspinnatus
ENSHCOG00000003148	rbm18	81	62.346	ENSPMAG00000000630	rbm18	94	62.346	Petromyzon_marinus
ENSHCOG00000003148	rbm18	93	69.022	ENSPCIG00000025526	RBM18	95	69.022	Phascolarctos_cinereus
ENSHCOG00000003148	rbm18	100	86.567	ENSPFOG00000019706	rbm18	100	86.567	Poecilia_formosa
ENSHCOG00000003148	rbm18	100	86.567	ENSPLAG00000005571	rbm18	100	86.567	Poecilia_latipinna
ENSHCOG00000003148	rbm18	100	86.567	ENSPMEG00000013977	rbm18	100	86.567	Poecilia_mexicana
ENSHCOG00000003148	rbm18	100	86.567	ENSPREG00000009157	rbm18	100	86.567	Poecilia_reticulata
ENSHCOG00000003148	rbm18	93	67.935	ENSPPYG00000019569	RBM18	95	67.935	Pongo_abelii
ENSHCOG00000003148	rbm18	68	73.134	ENSPCAG00000011245	RBM18	98	73.134	Procavia_capensis
ENSHCOG00000003148	rbm18	93	67.935	ENSPCOG00000024474	RBM18	95	67.935	Propithecus_coquereli
ENSHCOG00000003148	rbm18	93	67.935	ENSPVAG00000000863	RBM18	95	67.935	Pteropus_vampyrus
ENSHCOG00000003148	rbm18	100	89.552	ENSPNYG00000012421	rbm18	100	89.552	Pundamilia_nyererei
ENSHCOG00000003148	rbm18	100	75.377	ENSPNAG00000017660	rbm18	100	75.377	Pygocentrus_nattereri
ENSHCOG00000003148	rbm18	93	67.391	ENSRNOG00000006763	Rbm18	95	67.391	Rattus_norvegicus
ENSHCOG00000003148	rbm18	93	68.478	ENSRBIG00000040177	RBM18	95	68.478	Rhinopithecus_bieti
ENSHCOG00000003148	rbm18	93	68.478	ENSRROG00000031364	RBM18	95	68.478	Rhinopithecus_roxellana
ENSHCOG00000003148	rbm18	93	67.935	ENSSBOG00000024806	RBM18	95	67.935	Saimiri_boliviensis_boliviensis
ENSHCOG00000003148	rbm18	93	69.022	ENSSHAG00000012257	RBM18	95	69.022	Sarcophilus_harrisii
ENSHCOG00000003148	rbm18	98	77.320	ENSSFOG00015001100	rbm18	100	77.320	Scleropages_formosus
ENSHCOG00000003148	rbm18	100	87.562	ENSSMAG00000020138	rbm18	100	87.562	Scophthalmus_maximus
ENSHCOG00000003148	rbm18	100	89.055	ENSSDUG00000016203	rbm18	98	89.055	Seriola_dumerili
ENSHCOG00000003148	rbm18	100	89.055	ENSSLDG00000016329	rbm18	100	89.055	Seriola_lalandi_dorsalis
ENSHCOG00000003148	rbm18	77	66.225	ENSSPUG00000001601	RBM18	84	66.443	Sphenodon_punctatus
ENSHCOG00000003148	rbm18	100	90.050	ENSSPAG00000005394	rbm18	100	90.050	Stegastes_partitus
ENSHCOG00000003148	rbm18	93	67.391	ENSSSCG00000030089	RBM18	95	67.391	Sus_scrofa
ENSHCOG00000003148	rbm18	77	67.550	ENSTGUG00000006802	RBM18	95	67.785	Taeniopygia_guttata
ENSHCOG00000003148	rbm18	100	84.080	ENSTRUG00000005812	rbm18	100	84.080	Takifugu_rubripes
ENSHCOG00000003148	rbm18	95	86.096	ENSTNIG00000009141	rbm18	96	86.096	Tetraodon_nigroviridis
ENSHCOG00000003148	rbm18	77	68.874	ENSTBEG00000016520	RBM18	96	68.874	Tupaia_belangeri
ENSHCOG00000003148	rbm18	93	67.935	ENSUAMG00000014431	RBM18	95	67.935	Ursus_americanus
ENSHCOG00000003148	rbm18	93	67.935	ENSUMAG00000003445	RBM18	95	67.935	Ursus_maritimus
ENSHCOG00000003148	rbm18	93	67.935	ENSVPAG00000008618	RBM18	95	67.935	Vicugna_pacos
ENSHCOG00000003148	rbm18	93	67.935	ENSVVUG00000009442	RBM18	95	67.935	Vulpes_vulpes
ENSHCOG00000003148	rbm18	95	61.702	ENSXETG00000016328	rbm18	97	61.702	Xenopus_tropicalis
ENSHCOG00000003148	rbm18	100	87.562	ENSXMAG00000003538	rbm18	100	87.562	Xiphophorus_maculatus