EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003310 (Gene tree)
Gene ID: 109529124
Gene Symbol: denr
Alias: im:6891640|zgc:113309|zgc:92629
Full Name: density regulated re-initiation and release factor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 2548 bases
Position: chrKV880349.1:104639-107186
Accession: 109529124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018630	SUI1	PF01253.22	2e-16	1	1
ENSHCOP00000002217	SUI1	PF01253.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010779	-	913	XM_019892313	ENSHCOP00000018630	193 (aa)	XP_019747872	UPI00094EB01F
ENSHCOT00000010792	-	597	-	ENSHCOP00000002217	198 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000003310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003310	denr	92	81.667	ENSG00000139726	DENR	88	81.667	Homo_sapiens
ENSHCOG00000003310	denr	100	84.422	ENSAPOG00000021065	denr	100	88.021	Acanthochromis_polyacanthus
ENSHCOG00000003310	denr	100	70.443	ENSAMEG00000014851	DENR	99	67.980	Ailuropoda_melanoleuca
ENSHCOG00000003310	denr	94	88.462	ENSACIG00000007705	denr	100	85.000	Amphilophus_citrinellus
ENSHCOG00000003310	denr	100	84.422	ENSAOCG00000004767	denr	100	88.021	Amphiprion_ocellaris
ENSHCOG00000003310	denr	100	83.920	ENSAPEG00000006323	denr	100	87.500	Amphiprion_percula
ENSHCOG00000003310	denr	100	85.427	ENSATEG00000004198	denr	96	90.659	Anabas_testudineus
ENSHCOG00000003310	denr	92	81.461	ENSAPLG00000003750	DENR	87	81.461	Anas_platyrhynchos
ENSHCOG00000003310	denr	97	75.377	ENSACAG00000016012	DENR	100	75.377	Anolis_carolinensis
ENSHCOG00000003310	denr	92	81.356	ENSANAG00000033479	-	88	81.356	Aotus_nancymaae
ENSHCOG00000003310	denr	92	64.088	ENSANAG00000011753	-	91	63.128	Aotus_nancymaae
ENSHCOG00000003310	denr	100	84.925	ENSACLG00000024786	denr	100	85.567	Astatotilapia_calliptera
ENSHCOG00000003310	denr	100	79.703	ENSAMXG00000019387	denr	100	84.653	Astyanax_mexicanus
ENSHCOG00000003310	denr	92	81.667	ENSBTAG00000049723	DENR	88	81.667	Bos_taurus
ENSHCOG00000003310	denr	92	81.667	ENSBTAG00000032433	DENR	88	81.667	Bos_taurus
ENSHCOG00000003310	denr	90	43.750	WBGene00012932	Y47D3A.21	89	45.763	Caenorhabditis_elegans
ENSHCOG00000003310	denr	73	65.248	ENSCJAG00000042372	-	85	65.248	Callithrix_jacchus
ENSHCOG00000003310	denr	92	81.356	ENSCJAG00000020488	DENR	88	81.356	Callithrix_jacchus
ENSHCOG00000003310	denr	100	74.877	ENSCAFG00000032380	DENR	72	74.877	Canis_familiaris
ENSHCOG00000003310	denr	92	81.667	ENSCAFG00020016334	DENR	88	81.667	Canis_lupus_dingo
ENSHCOG00000003310	denr	92	81.667	ENSCHIG00000025489	DENR	88	81.667	Capra_hircus
ENSHCOG00000003310	denr	92	77.778	ENSTSYG00000035451	-	88	77.778	Carlito_syrichta
ENSHCOG00000003310	denr	92	80.556	ENSTSYG00000028003	-	88	80.556	Carlito_syrichta
ENSHCOG00000003310	denr	85	79.042	ENSCAPG00000002873	DENR	100	79.042	Cavia_aperea
ENSHCOG00000003310	denr	92	80.000	ENSCPOG00000031356	DENR	88	80.000	Cavia_porcellus
ENSHCOG00000003310	denr	93	74.860	ENSCCAG00000026516	-	91	74.860	Cebus_capucinus
ENSHCOG00000003310	denr	91	59.659	ENSCCAG00000033248	-	90	61.932	Cebus_capucinus
ENSHCOG00000003310	denr	92	81.667	ENSCATG00000032375	-	88	81.667	Cercocebus_atys
ENSHCOG00000003310	denr	92	80.000	ENSCLAG00000014586	DENR	88	80.000	Chinchilla_lanigera
ENSHCOG00000003310	denr	80	81.529	ENSCSAG00000002095	DENR	100	83.766	Chlorocebus_sabaeus
ENSHCOG00000003310	denr	92	69.663	ENSCHOG00000011505	DENR	88	71.023	Choloepus_hoffmanni
ENSHCOG00000003310	denr	100	74.627	ENSCPBG00000026018	DENR	100	74.627	Chrysemys_picta_bellii
ENSHCOG00000003310	denr	96	54.255	ENSCING00000022096	-	90	54.255	Ciona_intestinalis
ENSHCOG00000003310	denr	90	52.841	ENSCSAVG00000008066	-	85	52.841	Ciona_savignyi
ENSHCOG00000003310	denr	92	81.667	ENSCGRG00001022427	Denr	88	81.667	Cricetulus_griseus_chok1gshd
ENSHCOG00000003310	denr	92	81.667	ENSCGRG00000014376	Denr	88	81.667	Cricetulus_griseus_crigri
ENSHCOG00000003310	denr	100	88.442	ENSCSEG00000012090	denr	100	88.442	Cynoglossus_semilaevis
ENSHCOG00000003310	denr	100	86.935	ENSCVAG00000006732	denr	99	86.935	Cyprinodon_variegatus
ENSHCOG00000003310	denr	100	75.481	ENSDARG00000037229	denr	100	81.250	Danio_rerio
ENSHCOG00000003310	denr	92	77.222	ENSDNOG00000036413	-	88	77.222	Dasypus_novemcinctus
ENSHCOG00000003310	denr	80	80.519	ENSDNOG00000001447	DENR	100	82.237	Dasypus_novemcinctus
ENSHCOG00000003310	denr	90	48.571	FBgn0030802	DENR	87	49.143	Drosophila_melanogaster
ENSHCOG00000003310	denr	86	69.364	ENSETEG00000013029	DENR	88	69.364	Echinops_telfairi
ENSHCOG00000003310	denr	100	75.862	ENSEASG00005012513	DENR	100	74.500	Equus_asinus_asinus
ENSHCOG00000003310	denr	100	75.862	ENSECAG00000021824	DENR	72	75.862	Equus_caballus
ENSHCOG00000003310	denr	100	81.095	ENSELUG00000002656	denr	100	81.095	Esox_lucius
ENSHCOG00000003310	denr	92	81.356	ENSFCAG00000006126	DENR	88	81.356	Felis_catus
ENSHCOG00000003310	denr	92	80.791	ENSFALG00000009235	DENR	89	80.791	Ficedula_albicollis
ENSHCOG00000003310	denr	82	66.667	ENSFDAG00000018403	-	84	66.667	Fukomys_damarensis
ENSHCOG00000003310	denr	92	79.444	ENSFDAG00000016899	-	88	79.444	Fukomys_damarensis
ENSHCOG00000003310	denr	100	87.755	ENSFHEG00000007729	denr	100	87.755	Fundulus_heteroclitus
ENSHCOG00000003310	denr	100	80.500	ENSGMOG00000017892	denr	100	80.500	Gadus_morhua
ENSHCOG00000003310	denr	92	81.461	ENSGALG00000003795	DENR	88	81.461	Gallus_gallus
ENSHCOG00000003310	denr	100	82.000	ENSGAFG00000004297	denr	100	83.249	Gambusia_affinis
ENSHCOG00000003310	denr	100	85.930	ENSGACG00000015614	denr	100	85.930	Gasterosteus_aculeatus
ENSHCOG00000003310	denr	100	74.627	ENSGAGG00000023819	DENR	100	74.627	Gopherus_agassizii
ENSHCOG00000003310	denr	92	81.667	ENSGGOG00000005562	DENR	88	81.667	Gorilla_gorilla
ENSHCOG00000003310	denr	100	88.442	ENSHBUG00000011606	denr	100	88.442	Haplochromis_burtoni
ENSHCOG00000003310	denr	92	79.444	ENSHGLG00000009606	DENR	88	79.444	Heterocephalus_glaber_female
ENSHCOG00000003310	denr	92	79.444	ENSHGLG00100019201	DENR	88	79.444	Heterocephalus_glaber_male
ENSHCOG00000003310	denr	100	77.725	ENSIPUG00000016199	denr	100	78.365	Ictalurus_punctatus
ENSHCOG00000003310	denr	92	81.111	ENSSTOG00000014128	DENR	88	81.714	Ictidomys_tridecemlineatus
ENSHCOG00000003310	denr	69	71.324	ENSJJAG00000013822	-	79	74.627	Jaculus_jaculus
ENSHCOG00000003310	denr	92	79.096	ENSJJAG00000012558	-	88	79.096	Jaculus_jaculus
ENSHCOG00000003310	denr	100	75.130	ENSJJAG00000008721	-	93	79.096	Jaculus_jaculus
ENSHCOG00000003310	denr	100	88.718	ENSKMAG00000008452	denr	100	88.718	Kryptolebias_marmoratus
ENSHCOG00000003310	denr	95	88.525	ENSLBEG00000021674	denr	100	85.930	Labrus_bergylta
ENSHCOG00000003310	denr	65	81.746	ENSLACG00000022178	DENR	95	82.540	Latimeria_chalumnae
ENSHCOG00000003310	denr	100	79.500	ENSLOCG00000005501	denr	100	79.500	Lepisosteus_oculatus
ENSHCOG00000003310	denr	92	77.401	ENSLAFG00000031728	DENR	89	77.401	Loxodonta_africana
ENSHCOG00000003310	denr	92	81.667	ENSMFAG00000038312	DENR	88	81.667	Macaca_fascicularis
ENSHCOG00000003310	denr	92	81.667	ENSMMUG00000046801	DENR	88	81.667	Macaca_mulatta
ENSHCOG00000003310	denr	61	66.102	ENSMNEG00000030944	-	78	63.226	Macaca_nemestrina
ENSHCOG00000003310	denr	92	81.667	ENSMNEG00000034844	-	88	81.667	Macaca_nemestrina
ENSHCOG00000003310	denr	92	81.667	ENSMLEG00000032214	DENR	88	81.667	Mandrillus_leucophaeus
ENSHCOG00000003310	denr	94	87.845	ENSMAMG00000011386	denr	100	85.204	Mastacembelus_armatus
ENSHCOG00000003310	denr	100	84.925	ENSMZEG00005007982	denr	100	85.567	Maylandia_zebra
ENSHCOG00000003310	denr	92	81.461	ENSMGAG00000003720	DENR	87	81.461	Meleagris_gallopavo
ENSHCOG00000003310	denr	92	70.652	ENSMAUG00000020940	Denr	87	72.832	Mesocricetus_auratus
ENSHCOG00000003310	denr	92	81.356	ENSMICG00000046263	DENR	88	81.356	Microcebus_murinus
ENSHCOG00000003310	denr	99	75.897	ENSMOCG00000019231	Denr	96	75.897	Microtus_ochrogaster
ENSHCOG00000003310	denr	100	80.203	ENSMMOG00000009357	denr	100	82.632	Mola_mola
ENSHCOG00000003310	denr	92	82.022	ENSMODG00000012302	DENR	88	82.022	Monodelphis_domestica
ENSHCOG00000003310	denr	94	90.608	ENSMALG00000018416	denr	100	86.935	Monopterus_albus
ENSHCOG00000003310	denr	92	81.356	MGP_CAROLIEiJ_G0027737	Denr	88	81.356	Mus_caroli
ENSHCOG00000003310	denr	92	81.356	ENSMUSG00000023106	Denr	88	81.356	Mus_musculus
ENSHCOG00000003310	denr	92	81.356	MGP_PahariEiJ_G0024317	Denr	88	81.356	Mus_pahari
ENSHCOG00000003310	denr	92	81.356	MGP_SPRETEiJ_G0028735	Denr	88	81.356	Mus_spretus
ENSHCOG00000003310	denr	100	72.000	ENSMPUG00000001826	DENR	73	72.000	Mustela_putorius_furo
ENSHCOG00000003310	denr	100	70.500	ENSMLUG00000002088	DENR	89	79.330	Myotis_lucifugus
ENSHCOG00000003310	denr	92	80.556	ENSNGAG00000013775	Denr	88	80.556	Nannospalax_galili
ENSHCOG00000003310	denr	100	86.935	ENSNBRG00000018898	denr	100	86.935	Neolamprologus_brichardi
ENSHCOG00000003310	denr	92	81.667	ENSNLEG00000029880	DENR	88	81.667	Nomascus_leucogenys
ENSHCOG00000003310	denr	91	75.843	ENSODEG00000009408	-	87	75.843	Octodon_degus
ENSHCOG00000003310	denr	84	76.074	ENSODEG00000005378	-	84	80.000	Octodon_degus
ENSHCOG00000003310	denr	90	62.069	ENSODEG00000006563	-	84	62.069	Octodon_degus
ENSHCOG00000003310	denr	100	87.940	ENSONIG00000015319	denr	100	87.940	Oreochromis_niloticus
ENSHCOG00000003310	denr	92	77.401	ENSOANG00000011417	-	89	77.778	Ornithorhynchus_anatinus
ENSHCOG00000003310	denr	92	81.667	ENSOCUG00000008150	-	88	81.667	Oryctolagus_cuniculus
ENSHCOG00000003310	denr	92	70.621	ENSOCUG00000027291	-	92	70.690	Oryctolagus_cuniculus
ENSHCOG00000003310	denr	100	85.567	ENSORLG00000001495	denr	100	89.305	Oryzias_latipes
ENSHCOG00000003310	denr	100	85.567	ENSORLG00020015485	denr	100	89.305	Oryzias_latipes_hni
ENSHCOG00000003310	denr	100	86.082	ENSORLG00015002890	denr	100	88.830	Oryzias_latipes_hsok
ENSHCOG00000003310	denr	100	86.082	ENSOMEG00000021836	denr	100	89.840	Oryzias_melastigma
ENSHCOG00000003310	denr	92	81.667	ENSOGAG00000012426	DENR	88	81.667	Otolemur_garnettii
ENSHCOG00000003310	denr	92	75.556	ENSOARG00000008511	DENR	88	75.556	Ovis_aries
ENSHCOG00000003310	denr	92	74.731	ENSPPAG00000031425	DENR	89	75.269	Pan_paniscus
ENSHCOG00000003310	denr	92	81.356	ENSPPRG00000009664	-	88	81.356	Panthera_pardus
ENSHCOG00000003310	denr	100	51.813	ENSPPRG00000020005	-	100	53.368	Panthera_pardus
ENSHCOG00000003310	denr	92	80.791	ENSPTIG00000014761	-	88	80.791	Panthera_tigris_altaica
ENSHCOG00000003310	denr	89	72.093	ENSPTIG00000021643	-	91	72.093	Panthera_tigris_altaica
ENSHCOG00000003310	denr	92	81.667	ENSPTRG00000005584	DENR	88	81.667	Pan_troglodytes
ENSHCOG00000003310	denr	85	82.143	ENSPANG00000035364	-	100	81.818	Papio_anubis
ENSHCOG00000003310	denr	92	81.667	ENSPANG00000030074	-	88	81.667	Papio_anubis
ENSHCOG00000003310	denr	100	78.000	ENSPKIG00000001107	denr	100	77.436	Paramormyrops_kingsleyae
ENSHCOG00000003310	denr	92	80.899	ENSPSIG00000008249	DENR	84	80.899	Pelodiscus_sinensis
ENSHCOG00000003310	denr	93	75.269	ENSPMGG00000017214	denr	72	78.212	Periophthalmus_magnuspinnatus
ENSHCOG00000003310	denr	92	82.222	ENSPEMG00000006521	-	88	82.222	Peromyscus_maniculatus_bairdii
ENSHCOG00000003310	denr	90	69.540	ENSPMAG00000008589	denr	92	69.540	Petromyzon_marinus
ENSHCOG00000003310	denr	100	76.119	ENSPCIG00000022523	DENR	99	75.000	Phascolarctos_cinereus
ENSHCOG00000003310	denr	100	85.930	ENSPFOG00000023419	denr	100	85.427	Poecilia_formosa
ENSHCOG00000003310	denr	100	85.930	ENSPLAG00000014807	denr	100	85.427	Poecilia_latipinna
ENSHCOG00000003310	denr	100	80.976	ENSPMEG00000020699	denr	100	81.188	Poecilia_mexicana
ENSHCOG00000003310	denr	100	85.930	ENSPREG00000016795	denr	100	85.427	Poecilia_reticulata
ENSHCOG00000003310	denr	92	77.901	ENSPCAG00000012039	DENR	88	82.759	Procavia_capensis
ENSHCOG00000003310	denr	92	81.356	ENSPCOG00000015933	DENR	88	81.356	Propithecus_coquereli
ENSHCOG00000003310	denr	100	73.529	ENSPVAG00000001291	DENR	100	75.124	Pteropus_vampyrus
ENSHCOG00000003310	denr	100	86.935	ENSPNYG00000003833	denr	100	86.935	Pundamilia_nyererei
ENSHCOG00000003310	denr	100	82.266	ENSPNAG00000021662	denr	100	82.500	Pygocentrus_nattereri
ENSHCOG00000003310	denr	100	74.490	ENSRNOG00000001106	Denr	100	74.490	Rattus_norvegicus
ENSHCOG00000003310	denr	92	56.497	ENSRBIG00000041357	DENR	86	57.627	Rhinopithecus_bieti
ENSHCOG00000003310	denr	92	81.667	ENSRROG00000044446	DENR	88	81.667	Rhinopithecus_roxellana
ENSHCOG00000003310	denr	69	75.940	ENSSBOG00000030149	-	74	75.940	Saimiri_boliviensis_boliviensis
ENSHCOG00000003310	denr	91	47.727	ENSSBOG00000024171	-	86	49.419	Saimiri_boliviensis_boliviensis
ENSHCOG00000003310	denr	91	76.404	ENSSHAG00000012064	DENR	88	76.966	Sarcophilus_harrisii
ENSHCOG00000003310	denr	100	82.000	ENSSFOG00015018494	denr	100	82.000	Scleropages_formosus
ENSHCOG00000003310	denr	100	80.905	ENSSMAG00000010563	denr	100	85.052	Scophthalmus_maximus
ENSHCOG00000003310	denr	100	89.447	ENSSDUG00000023551	denr	100	89.447	Seriola_dumerili
ENSHCOG00000003310	denr	100	89.950	ENSSLDG00000011430	denr	100	89.950	Seriola_lalandi_dorsalis
ENSHCOG00000003310	denr	82	81.366	ENSSARG00000004446	DENR	100	83.544	Sorex_araneus
ENSHCOG00000003310	denr	92	80.337	ENSSPUG00000012205	DENR	88	80.337	Sphenodon_punctatus
ENSHCOG00000003310	denr	100	88.945	ENSSPAG00000019529	denr	100	88.945	Stegastes_partitus
ENSHCOG00000003310	denr	92	81.667	ENSSSCG00000009788	-	88	81.667	Sus_scrofa
ENSHCOG00000003310	denr	92	77.966	ENSTGUG00000005674	DENR	88	74.566	Taeniopygia_guttata
ENSHCOG00000003310	denr	100	78.392	ENSTRUG00000020621	denr	100	80.729	Takifugu_rubripes
ENSHCOG00000003310	denr	100	84.422	ENSTNIG00000013510	denr	99	84.422	Tetraodon_nigroviridis
ENSHCOG00000003310	denr	100	60.891	ENSTTRG00000015856	DENR	100	64.322	Tursiops_truncatus
ENSHCOG00000003310	denr	100	75.862	ENSUAMG00000003667	-	100	74.500	Ursus_americanus
ENSHCOG00000003310	denr	85	51.807	ENSUAMG00000011200	-	85	51.807	Ursus_americanus
ENSHCOG00000003310	denr	100	75.862	ENSUMAG00000005166	-	100	74.500	Ursus_maritimus
ENSHCOG00000003310	denr	85	51.205	ENSUMAG00000023866	-	85	51.205	Ursus_maritimus
ENSHCOG00000003310	denr	58	93.750	ENSVPAG00000011472	DENR	52	95.050	Vicugna_pacos
ENSHCOG00000003310	denr	100	74.877	ENSVVUG00000028097	DENR	72	74.877	Vulpes_vulpes
ENSHCOG00000003310	denr	92	82.222	ENSXETG00000005791	denr	88	81.667	Xenopus_tropicalis
ENSHCOG00000003310	denr	100	79.899	ENSXCOG00000017611	denr	100	82.292	Xiphophorus_couchianus
ENSHCOG00000003310	denr	100	85.427	ENSXMAG00000019247	denr	100	85.427	Xiphophorus_maculatus