EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003318 (Gene tree)
Gene ID: 109530677
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 3775 bases
Position: chrKV880396.1:928517-932291
Accession: 109530677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002207	RNase_H2-Ydr279	PF09468.10	2.1e-15	1	1
ENSHCOP00000002179	RNase_H2-Ydr279	PF09468.10	2.6e-15	1	1
ENSHCOP00000002190	RNase_H2-Ydr279	PF09468.10	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010795	-	912	-	ENSHCOP00000002207	303 (aa)	-	-
ENSHCOT00000010834	-	840	XM_019894576	ENSHCOP00000002190	279 (aa)	XP_019750135	-
ENSHCOT00000010842	-	990	-	ENSHCOP00000002179	329 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000003318's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003318	rnaseh2b	86	51.837	ENSG00000136104	RNASEH2B	97	52.809	Homo_sapiens
ENSHCOG00000003318	rnaseh2b	100	76.299	ENSAPOG00000010496	rnaseh2b	100	76.299	Acanthochromis_polyacanthus
ENSHCOG00000003318	rnaseh2b	86	51.012	ENSAMEG00000012040	RNASEH2B	92	48.000	Ailuropoda_melanoleuca
ENSHCOG00000003318	rnaseh2b	100	71.777	ENSACIG00000021991	rnaseh2b	100	71.777	Amphilophus_citrinellus
ENSHCOG00000003318	rnaseh2b	100	75.649	ENSAOCG00000013398	rnaseh2b	100	75.649	Amphiprion_ocellaris
ENSHCOG00000003318	rnaseh2b	100	75.325	ENSAPEG00000006033	rnaseh2b	100	75.325	Amphiprion_percula
ENSHCOG00000003318	rnaseh2b	100	75.000	ENSATEG00000008370	rnaseh2b	100	75.000	Anabas_testudineus
ENSHCOG00000003318	rnaseh2b	86	60.976	ENSAPLG00000008955	RNASEH2B	99	59.341	Anas_platyrhynchos
ENSHCOG00000003318	rnaseh2b	92	57.197	ENSACAG00000011679	RNASEH2B	97	53.265	Anolis_carolinensis
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSANAG00000020662	RNASEH2B	86	47.970	Aotus_nancymaae
ENSHCOG00000003318	rnaseh2b	100	73.701	ENSACLG00000000467	rnaseh2b	100	73.701	Astatotilapia_calliptera
ENSHCOG00000003318	rnaseh2b	99	65.472	ENSAMXG00000014351	rnaseh2b	99	65.472	Astyanax_mexicanus
ENSHCOG00000003318	rnaseh2b	90	46.290	ENSBTAG00000020149	RNASEH2B	90	46.454	Bos_taurus
ENSHCOG00000003318	rnaseh2b	66	45.503	ENSCJAG00000003822	-	76	42.788	Callithrix_jacchus
ENSHCOG00000003318	rnaseh2b	86	51.230	ENSCJAG00000008585	-	91	46.953	Callithrix_jacchus
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSCAFG00000004295	RNASEH2B	88	47.601	Canis_familiaris
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSCAFG00020000250	RNASEH2B	88	47.970	Canis_lupus_dingo
ENSHCOG00000003318	rnaseh2b	80	47.137	ENSCHIG00000012982	-	81	46.460	Capra_hircus
ENSHCOG00000003318	rnaseh2b	85	52.263	ENSCHIG00000018220	RNASEH2B	87	48.327	Capra_hircus
ENSHCOG00000003318	rnaseh2b	86	50.612	ENSTSYG00000009176	-	98	42.997	Carlito_syrichta
ENSHCOG00000003318	rnaseh2b	85	44.628	ENSTSYG00000031177	-	86	40.892	Carlito_syrichta
ENSHCOG00000003318	rnaseh2b	86	43.443	ENSCAPG00000009978	RNASEH2B	91	41.264	Cavia_aperea
ENSHCOG00000003318	rnaseh2b	86	50.000	ENSCPOG00000032527	RNASEH2B	86	46.667	Cavia_porcellus
ENSHCOG00000003318	rnaseh2b	86	52.049	ENSCCAG00000026979	RNASEH2B	88	48.889	Cebus_capucinus
ENSHCOG00000003318	rnaseh2b	84	51.681	ENSCATG00000031336	RNASEH2B	74	48.106	Cercocebus_atys
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSCLAG00000003517	RNASEH2B	74	49.071	Chinchilla_lanigera
ENSHCOG00000003318	rnaseh2b	87	49.035	ENSCSAG00000017701	RNASEH2B	85	45.965	Chlorocebus_sabaeus
ENSHCOG00000003318	rnaseh2b	95	38.305	ENSCHOG00000013688	RNASEH2B	95	38.305	Choloepus_hoffmanni
ENSHCOG00000003318	rnaseh2b	99	53.722	ENSCPBG00000008684	RNASEH2B	95	53.722	Chrysemys_picta_bellii
ENSHCOG00000003318	rnaseh2b	95	33.333	ENSCING00000016454	-	96	33.333	Ciona_intestinalis
ENSHCOG00000003318	rnaseh2b	86	50.806	ENSCANG00000041511	-	87	47.445	Colobus_angolensis_palliatus
ENSHCOG00000003318	rnaseh2b	86	53.878	ENSCGRG00001000611	Rnaseh2b	87	49.815	Cricetulus_griseus_chok1gshd
ENSHCOG00000003318	rnaseh2b	86	53.878	ENSCGRG00000006077	Rnaseh2b	87	49.815	Cricetulus_griseus_crigri
ENSHCOG00000003318	rnaseh2b	100	77.895	ENSCSEG00000004910	rnaseh2b	100	77.895	Cynoglossus_semilaevis
ENSHCOG00000003318	rnaseh2b	100	70.130	ENSCVAG00000005212	rnaseh2b	100	70.130	Cyprinodon_variegatus
ENSHCOG00000003318	rnaseh2b	99	65.584	ENSDARG00000005128	rnaseh2b	99	65.584	Danio_rerio
ENSHCOG00000003318	rnaseh2b	85	46.091	ENSDNOG00000034290	-	86	43.123	Dasypus_novemcinctus
ENSHCOG00000003318	rnaseh2b	86	50.813	ENSDNOG00000049666	-	87	46.296	Dasypus_novemcinctus
ENSHCOG00000003318	rnaseh2b	86	52.459	ENSDORG00000010708	Rnaseh2b	86	48.339	Dipodomys_ordii
ENSHCOG00000003318	rnaseh2b	85	30.037	FBgn0030507	CG11164	79	30.037	Drosophila_melanogaster
ENSHCOG00000003318	rnaseh2b	86	37.398	ENSEBUG00000005965	rnaseh2b	96	37.008	Eptatretus_burgeri
ENSHCOG00000003318	rnaseh2b	86	51.837	ENSEASG00005017323	RNASEH2B	86	47.970	Equus_asinus_asinus
ENSHCOG00000003318	rnaseh2b	86	52.245	ENSECAG00000014262	RNASEH2B	86	48.339	Equus_caballus
ENSHCOG00000003318	rnaseh2b	100	68.932	ENSELUG00000019560	rnaseh2b	100	68.932	Esox_lucius
ENSHCOG00000003318	rnaseh2b	84	49.580	ENSFCAG00000014257	RNASEH2B	82	45.833	Felis_catus
ENSHCOG00000003318	rnaseh2b	92	59.542	ENSFALG00000008435	RNASEH2B	100	55.150	Ficedula_albicollis
ENSHCOG00000003318	rnaseh2b	90	46.403	ENSFDAG00000009920	RNASEH2B	96	46.429	Fukomys_damarensis
ENSHCOG00000003318	rnaseh2b	100	73.052	ENSFHEG00000012160	rnaseh2b	100	73.052	Fundulus_heteroclitus
ENSHCOG00000003318	rnaseh2b	100	70.103	ENSGMOG00000016830	rnaseh2b	100	70.103	Gadus_morhua
ENSHCOG00000003318	rnaseh2b	99	54.516	ENSGALG00000017015	RNASEH2B	100	54.516	Gallus_gallus
ENSHCOG00000003318	rnaseh2b	100	72.403	ENSGAFG00000021222	rnaseh2b	100	72.403	Gambusia_affinis
ENSHCOG00000003318	rnaseh2b	100	72.930	ENSGACG00000002821	rnaseh2b	100	72.930	Gasterosteus_aculeatus
ENSHCOG00000003318	rnaseh2b	92	58.779	ENSGAGG00000014722	RNASEH2B	99	56.429	Gopherus_agassizii
ENSHCOG00000003318	rnaseh2b	86	51.210	ENSGGOG00000001044	RNASEH2B	89	46.996	Gorilla_gorilla
ENSHCOG00000003318	rnaseh2b	100	76.471	ENSHBUG00000006049	rnaseh2b	100	76.471	Haplochromis_burtoni
ENSHCOG00000003318	rnaseh2b	86	51.020	ENSHGLG00100015953	RNASEH2B	94	46.071	Heterocephalus_glaber_male
ENSHCOG00000003318	rnaseh2b	100	67.638	ENSIPUG00000023815	rnaseh2b	100	67.638	Ictalurus_punctatus
ENSHCOG00000003318	rnaseh2b	85	53.086	ENSSTOG00000015126	RNASEH2B	91	48.327	Ictidomys_tridecemlineatus
ENSHCOG00000003318	rnaseh2b	85	53.086	ENSJJAG00000013335	Rnaseh2b	90	49.630	Jaculus_jaculus
ENSHCOG00000003318	rnaseh2b	100	74.351	ENSKMAG00000002198	rnaseh2b	100	74.351	Kryptolebias_marmoratus
ENSHCOG00000003318	rnaseh2b	100	72.727	ENSLBEG00000019331	rnaseh2b	100	72.727	Labrus_bergylta
ENSHCOG00000003318	rnaseh2b	73	57.820	ENSLACG00000010782	RNASEH2B	92	58.150	Latimeria_chalumnae
ENSHCOG00000003318	rnaseh2b	100	63.548	ENSLOCG00000009296	rnaseh2b	100	63.548	Lepisosteus_oculatus
ENSHCOG00000003318	rnaseh2b	86	51.220	ENSLAFG00000030158	RNASEH2B	87	49.632	Loxodonta_africana
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSMFAG00000038464	-	86	47.970	Macaca_fascicularis
ENSHCOG00000003318	rnaseh2b	86	49.180	ENSMMUG00000021746	RNASEH2B	85	45.387	Macaca_mulatta
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSMNEG00000030580	RNASEH2B	86	47.970	Macaca_nemestrina
ENSHCOG00000003318	rnaseh2b	86	50.806	ENSMLEG00000043911	-	87	47.445	Mandrillus_leucophaeus
ENSHCOG00000003318	rnaseh2b	100	75.974	ENSMAMG00000017109	rnaseh2b	100	75.974	Mastacembelus_armatus
ENSHCOG00000003318	rnaseh2b	100	72.368	ENSMZEG00005021926	rnaseh2b	100	72.368	Maylandia_zebra
ENSHCOG00000003318	rnaseh2b	93	56.401	ENSMGAG00000015025	RNASEH2B	100	56.401	Meleagris_gallopavo
ENSHCOG00000003318	rnaseh2b	86	53.878	ENSMAUG00000016520	Rnaseh2b	87	49.815	Mesocricetus_auratus
ENSHCOG00000003318	rnaseh2b	86	50.612	ENSMICG00000000528	RNASEH2B	87	46.494	Microcebus_murinus
ENSHCOG00000003318	rnaseh2b	99	75.258	ENSMMOG00000019799	rnaseh2b	100	75.258	Mola_mola
ENSHCOG00000003318	rnaseh2b	98	51.645	ENSMODG00000010775	RNASEH2B	99	51.645	Monodelphis_domestica
ENSHCOG00000003318	rnaseh2b	99	73.941	ENSMALG00000004463	rnaseh2b	100	73.941	Monopterus_albus
ENSHCOG00000003318	rnaseh2b	78	54.091	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	54.091	Mus_caroli
ENSHCOG00000003318	rnaseh2b	86	53.469	ENSMUSG00000021932	Rnaseh2b	89	48.736	Mus_musculus
ENSHCOG00000003318	rnaseh2b	92	39.815	MGP_PahariEiJ_G0030407	-	93	40.184	Mus_pahari
ENSHCOG00000003318	rnaseh2b	66	49.198	ENSMPUG00000018010	RNASEH2B	82	45.960	Mustela_putorius_furo
ENSHCOG00000003318	rnaseh2b	86	53.061	ENSMLUG00000004065	-	86	49.442	Myotis_lucifugus
ENSHCOG00000003318	rnaseh2b	100	73.701	ENSNBRG00000003253	rnaseh2b	100	73.701	Neolamprologus_brichardi
ENSHCOG00000003318	rnaseh2b	86	51.210	ENSNLEG00000003804	RNASEH2B	89	46.996	Nomascus_leucogenys
ENSHCOG00000003318	rnaseh2b	92	54.340	ENSMEUG00000003665	RNASEH2B	97	52.650	Notamacropus_eugenii
ENSHCOG00000003318	rnaseh2b	57	50.307	ENSOPRG00000003695	-	52	50.920	Ochotona_princeps
ENSHCOG00000003318	rnaseh2b	73	46.860	ENSODEG00000005412	-	86	46.635	Octodon_degus
ENSHCOG00000003318	rnaseh2b	86	52.245	ENSODEG00000006793	-	87	49.071	Octodon_degus
ENSHCOG00000003318	rnaseh2b	100	73.377	ENSONIG00000006657	rnaseh2b	100	73.377	Oreochromis_niloticus
ENSHCOG00000003318	rnaseh2b	93	55.390	ENSOANG00000015537	RNASEH2B	97	53.710	Ornithorhynchus_anatinus
ENSHCOG00000003318	rnaseh2b	87	49.597	ENSOCUG00000008904	RNASEH2B	88	45.230	Oryctolagus_cuniculus
ENSHCOG00000003318	rnaseh2b	99	68.092	ENSORLG00000011850	rnaseh2b	100	68.092	Oryzias_latipes
ENSHCOG00000003318	rnaseh2b	99	68.421	ENSORLG00020012081	rnaseh2b	100	68.421	Oryzias_latipes_hni
ENSHCOG00000003318	rnaseh2b	99	67.763	ENSORLG00015015468	rnaseh2b	100	67.763	Oryzias_latipes_hsok
ENSHCOG00000003318	rnaseh2b	99	69.408	ENSOMEG00000012441	rnaseh2b	100	69.408	Oryzias_melastigma
ENSHCOG00000003318	rnaseh2b	86	52.016	ENSOGAG00000016486	RNASEH2B	91	48.175	Otolemur_garnettii
ENSHCOG00000003318	rnaseh2b	87	52.000	ENSOARG00000008701	RNASEH2B	90	48.148	Ovis_aries
ENSHCOG00000003318	rnaseh2b	86	51.210	ENSPPAG00000026374	RNASEH2B	90	47.826	Pan_paniscus
ENSHCOG00000003318	rnaseh2b	86	48.996	ENSPPRG00000012450	RNASEH2B	89	45.455	Panthera_pardus
ENSHCOG00000003318	rnaseh2b	86	49.398	ENSPTIG00000013918	RNASEH2B	97	45.818	Panthera_tigris_altaica
ENSHCOG00000003318	rnaseh2b	86	51.210	ENSPTRG00000005886	RNASEH2B	95	51.210	Pan_troglodytes
ENSHCOG00000003318	rnaseh2b	86	50.806	ENSPANG00000022424	-	87	47.445	Papio_anubis
ENSHCOG00000003318	rnaseh2b	100	65.049	ENSPKIG00000013386	rnaseh2b	100	65.049	Paramormyrops_kingsleyae
ENSHCOG00000003318	rnaseh2b	57	57.225	ENSPSIG00000002224	RNASEH2B	80	57.225	Pelodiscus_sinensis
ENSHCOG00000003318	rnaseh2b	70	72.000	ENSPMGG00000010299	rnaseh2b	97	72.000	Periophthalmus_magnuspinnatus
ENSHCOG00000003318	rnaseh2b	86	53.878	ENSPEMG00000019721	Rnaseh2b	87	50.929	Peromyscus_maniculatus_bairdii
ENSHCOG00000003318	rnaseh2b	88	51.282	ENSPCIG00000014535	-	92	51.282	Phascolarctos_cinereus
ENSHCOG00000003318	rnaseh2b	100	72.581	ENSPFOG00000016722	rnaseh2b	100	72.581	Poecilia_formosa
ENSHCOG00000003318	rnaseh2b	100	72.727	ENSPLAG00000011755	rnaseh2b	100	72.727	Poecilia_latipinna
ENSHCOG00000003318	rnaseh2b	100	73.052	ENSPMEG00000002721	rnaseh2b	100	73.052	Poecilia_mexicana
ENSHCOG00000003318	rnaseh2b	100	73.052	ENSPREG00000007737	rnaseh2b	100	73.052	Poecilia_reticulata
ENSHCOG00000003318	rnaseh2b	86	51.210	ENSPPYG00000005378	RNASEH2B	89	46.996	Pongo_abelii
ENSHCOG00000003318	rnaseh2b	86	51.220	ENSPCOG00000026623	RNASEH2B	87	47.426	Propithecus_coquereli
ENSHCOG00000003318	rnaseh2b	73	50.472	ENSPVAG00000000508	RNASEH2B	88	46.186	Pteropus_vampyrus
ENSHCOG00000003318	rnaseh2b	100	76.471	ENSPNYG00000013552	rnaseh2b	100	76.471	Pundamilia_nyererei
ENSHCOG00000003318	rnaseh2b	99	63.636	ENSPNAG00000024825	rnaseh2b	99	63.636	Pygocentrus_nattereri
ENSHCOG00000003318	rnaseh2b	86	53.469	ENSRNOG00000009192	Rnaseh2b	87	50.000	Rattus_norvegicus
ENSHCOG00000003318	rnaseh2b	86	51.020	ENSRBIG00000028928	-	86	47.970	Rhinopithecus_bieti
ENSHCOG00000003318	rnaseh2b	85	45.228	ENSRBIG00000036017	-	86	42.537	Rhinopithecus_bieti
ENSHCOG00000003318	rnaseh2b	67	40.741	ENSRROG00000044915	-	73	39.394	Rhinopithecus_roxellana
ENSHCOG00000003318	rnaseh2b	86	51.020	ENSRROG00000018808	-	87	47.445	Rhinopithecus_roxellana
ENSHCOG00000003318	rnaseh2b	86	51.020	ENSSBOG00000008081	RNASEH2B	96	47.955	Saimiri_boliviensis_boliviensis
ENSHCOG00000003318	rnaseh2b	100	52.412	ENSSHAG00000016190	RNASEH2B	100	53.074	Sarcophilus_harrisii
ENSHCOG00000003318	rnaseh2b	99	65.584	ENSSFOG00015010190	rnaseh2b	100	65.584	Scleropages_formosus
ENSHCOG00000003318	rnaseh2b	100	75.649	ENSSMAG00000001546	rnaseh2b	100	75.649	Scophthalmus_maximus
ENSHCOG00000003318	rnaseh2b	100	76.299	ENSSDUG00000007567	rnaseh2b	100	76.299	Seriola_dumerili
ENSHCOG00000003318	rnaseh2b	100	75.748	ENSSLDG00000012485	rnaseh2b	100	75.748	Seriola_lalandi_dorsalis
ENSHCOG00000003318	rnaseh2b	98	51.429	ENSSPUG00000006745	-	100	51.429	Sphenodon_punctatus
ENSHCOG00000003318	rnaseh2b	100	76.623	ENSSPAG00000020926	rnaseh2b	100	76.623	Stegastes_partitus
ENSHCOG00000003318	rnaseh2b	86	51.639	ENSSSCG00000024385	RNASEH2B	96	51.639	Sus_scrofa
ENSHCOG00000003318	rnaseh2b	92	59.770	ENSTGUG00000012104	RNASEH2B	99	57.875	Taeniopygia_guttata
ENSHCOG00000003318	rnaseh2b	100	73.052	ENSTRUG00000015098	rnaseh2b	100	73.052	Takifugu_rubripes
ENSHCOG00000003318	rnaseh2b	100	71.613	ENSTNIG00000013861	rnaseh2b	100	71.613	Tetraodon_nigroviridis
ENSHCOG00000003318	rnaseh2b	85	45.122	ENSTTRG00000010761	RNASEH2B	87	41.912	Tursiops_truncatus
ENSHCOG00000003318	rnaseh2b	86	51.837	ENSUAMG00000022849	RNASEH2B	96	47.970	Ursus_americanus
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSUMAG00000018556	RNASEH2B	96	47.601	Ursus_maritimus
ENSHCOG00000003318	rnaseh2b	85	52.459	ENSVPAG00000005679	RNASEH2B	92	48.519	Vicugna_pacos
ENSHCOG00000003318	rnaseh2b	86	51.429	ENSVVUG00000024015	RNASEH2B	80	48.339	Vulpes_vulpes
ENSHCOG00000003318	rnaseh2b	99	53.398	ENSXETG00000020720	rnaseh2b	100	53.398	Xenopus_tropicalis
ENSHCOG00000003318	rnaseh2b	100	73.986	ENSXCOG00000018732	rnaseh2b	100	73.986	Xiphophorus_couchianus
ENSHCOG00000003318	rnaseh2b	100	73.701	ENSXMAG00000022554	rnaseh2b	100	73.701	Xiphophorus_maculatus