EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000003357 (Gene tree)
Gene ID: 109531660
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 7348 bases
Position: chrKV879792.1:1126608-1133955
Accession: 109531660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018608	ResIII	PF04851.15	1.2e-06	1	1
ENSHCOP00000018619	ResIII	PF04851.15	1.7e-06	1	1
ENSHCOP00000018608	DEAD	PF00270.29	1.9e-48	1	1
ENSHCOP00000018619	DEAD	PF00270.29	2.7e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010817	-	2508	XM_019896077	ENSHCOP00000018619	835 (aa)	XP_019751636	-
ENSHCOT00000010825	-	2058	XM_019896125	ENSHCOP00000018608	685 (aa)	XP_019751684	-

Gene Model

Click here to download ENSHCOG00000003357's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000003357	ddx42	53	30.245	ENSHCOG00000018674	ddx39aa	84	30.245
ENSHCOG00000003357	ddx42	62	40.541	ENSHCOG00000004725	DDX41	70	40.899
ENSHCOG00000003357	ddx42	51	33.705	ENSHCOG00000007568	ddx18	58	33.705
ENSHCOG00000003357	ddx42	62	42.130	ENSHCOG00000008800	ddx5	72	41.741
ENSHCOG00000003357	ddx42	55	31.783	ENSHCOG00000012238	-	76	31.525
ENSHCOG00000003357	ddx42	62	42.857	ENSHCOG00000017168	-	67	42.857
ENSHCOG00000003357	ddx42	52	32.143	ENSHCOG00000014503	ddx21	54	31.671
ENSHCOG00000003357	ddx42	65	37.313	ENSHCOG00000016890	-	66	40.404
ENSHCOG00000003357	ddx42	62	41.686	ENSHCOG00000006456	-	64	41.784
ENSHCOG00000003357	ddx42	67	40.717	ENSHCOG00000019168	DDX5	74	40.717
ENSHCOG00000003357	ddx42	51	30.663	ENSHCOG00000008184	ddx61	72	31.025
ENSHCOG00000003357	ddx42	53	32.425	ENSHCOG00000009111	-	84	32.425
ENSHCOG00000003357	ddx42	62	40.230	ENSHCOG00000014704	ddx43	66	40.230
ENSHCOG00000003357	ddx42	59	39.808	ENSHCOG00000018337	ddx4	68	39.808
ENSHCOG00000003357	ddx42	65	36.831	ENSHCOG00000006275	-	66	37.107
ENSHCOG00000003357	ddx42	55	35.065	ENSHCOG00000008961	ddx49	78	35.065
ENSHCOG00000003357	ddx42	57	39.578	ENSHCOG00000019338	ddx23	55	39.578
ENSHCOG00000003357	ddx42	58	33.333	ENSHCOG00000009983	ddx59	63	33.333
ENSHCOG00000003357	ddx42	55	31.070	ENSHCOG00000012451	ddx6	77	30.576
ENSHCOG00000003357	ddx42	54	30.729	ENSHCOG00000013061	zgc:193690	81	30.147
ENSHCOG00000003357	ddx42	56	30.576	ENSHCOG00000007966	ddx52	71	30.827

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003357	ddx42	96	75.224	ENSG00000198231	DDX42	89	82.222	Homo_sapiens
ENSHCOG00000003357	ddx42	98	83.937	ENSAPOG00000017675	ddx42	88	86.335	Acanthochromis_polyacanthus
ENSHCOG00000003357	ddx42	97	75.732	ENSAMEG00000003200	DDX42	84	77.962	Ailuropoda_melanoleuca
ENSHCOG00000003357	ddx42	96	82.500	ENSACIG00000007376	ddx42	84	88.906	Amphilophus_citrinellus
ENSHCOG00000003357	ddx42	100	100.000	ENSAOCG00000003520	ddx42	84	86.873	Amphiprion_ocellaris
ENSHCOG00000003357	ddx42	100	77.996	ENSAPEG00000000984	ddx42	85	86.778	Amphiprion_percula
ENSHCOG00000003357	ddx42	100	78.689	ENSATEG00000022920	ddx42	86	86.990	Anabas_testudineus
ENSHCOG00000003357	ddx42	92	78.372	ENSAPLG00000010544	DDX42	84	78.672	Anas_platyrhynchos
ENSHCOG00000003357	ddx42	99	69.687	ENSACAG00000003994	DDX42	83	77.778	Anolis_carolinensis
ENSHCOG00000003357	ddx42	96	75.336	ENSANAG00000035693	DDX42	89	82.353	Aotus_nancymaae
ENSHCOG00000003357	ddx42	100	78.289	ENSACLG00000025113	ddx42	100	79.386	Astatotilapia_calliptera
ENSHCOG00000003357	ddx42	88	82.786	ENSAMXG00000011435	ddx42	86	80.958	Astyanax_mexicanus
ENSHCOG00000003357	ddx42	97	74.453	ENSBTAG00000021058	DDX42	90	80.404	Bos_taurus
ENSHCOG00000003357	ddx42	75	58.641	WBGene00008119	C46F11.4	69	54.401	Caenorhabditis_elegans
ENSHCOG00000003357	ddx42	97	74.594	ENSCJAG00000019649	DDX42	96	80.187	Callithrix_jacchus
ENSHCOG00000003357	ddx42	91	78.846	ENSCAFG00000012818	DDX42	83	78.434	Canis_familiaris
ENSHCOG00000003357	ddx42	91	78.974	ENSCAFG00020026631	DDX42	83	78.562	Canis_lupus_dingo
ENSHCOG00000003357	ddx42	99	71.021	ENSCHIG00000014431	DDX42	87	77.947	Capra_hircus
ENSHCOG00000003357	ddx42	91	78.645	ENSTSYG00000001380	DDX42	83	78.233	Carlito_syrichta
ENSHCOG00000003357	ddx42	95	58.295	ENSCAPG00000013621	DDX42	90	61.963	Cavia_aperea
ENSHCOG00000003357	ddx42	99	70.462	ENSCPOG00000005633	DDX42	85	78.299	Cavia_porcellus
ENSHCOG00000003357	ddx42	88	80.325	ENSCCAG00000020612	DDX42	88	82.353	Cebus_capucinus
ENSHCOG00000003357	ddx42	96	75.336	ENSCATG00000030490	DDX42	82	82.222	Cercocebus_atys
ENSHCOG00000003357	ddx42	99	70.204	ENSCLAG00000003497	DDX42	84	78.173	Chinchilla_lanigera
ENSHCOG00000003357	ddx42	96	70.920	ENSCSAG00000003914	DDX42	83	74.648	Chlorocebus_sabaeus
ENSHCOG00000003357	ddx42	67	89.423	ENSCHOG00000006241	DDX42	61	89.423	Choloepus_hoffmanni
ENSHCOG00000003357	ddx42	91	79.284	ENSCPBG00000026682	DDX42	82	79.385	Chrysemys_picta_bellii
ENSHCOG00000003357	ddx42	63	66.213	ENSCING00000001837	-	94	69.321	Ciona_intestinalis
ENSHCOG00000003357	ddx42	56	72.396	ENSCSAVG00000002180	-	99	72.656	Ciona_savignyi
ENSHCOG00000003357	ddx42	96	75.336	ENSCANG00000034663	DDX42	90	82.222	Colobus_angolensis_palliatus
ENSHCOG00000003357	ddx42	99	70.204	ENSCGRG00001009775	Ddx42	84	78.526	Cricetulus_griseus_chok1gshd
ENSHCOG00000003357	ddx42	99	70.204	ENSCGRG00000011718	Ddx42	84	78.526	Cricetulus_griseus_crigri
ENSHCOG00000003357	ddx42	95	81.643	ENSCSEG00000021574	ddx42	86	82.510	Cynoglossus_semilaevis
ENSHCOG00000003357	ddx42	100	77.111	ENSCVAG00000011404	ddx42	100	76.444	Cyprinodon_variegatus
ENSHCOG00000003357	ddx42	100	74.533	ENSDARG00000037928	ddx42	100	73.846	Danio_rerio
ENSHCOG00000003357	ddx42	88	78.905	ENSDNOG00000007961	DDX42	77	81.241	Dasypus_novemcinctus
ENSHCOG00000003357	ddx42	99	65.122	ENSDORG00000004199	Ddx42	84	70.446	Dipodomys_ordii
ENSHCOG00000003357	ddx42	74	66.601	FBgn0036104	CG6418	84	59.036	Drosophila_melanogaster
ENSHCOG00000003357	ddx42	100	67.806	ENSEBUG00000001155	ddx42	100	66.550	Eptatretus_burgeri
ENSHCOG00000003357	ddx42	100	71.588	ENSEASG00005013089	DDX42	90	82.306	Equus_asinus_asinus
ENSHCOG00000003357	ddx42	91	79.103	ENSECAG00000022684	DDX42	83	78.691	Equus_caballus
ENSHCOG00000003357	ddx42	64	88.279	ENSEEUG00000009144	DDX42	73	86.486	Erinaceus_europaeus
ENSHCOG00000003357	ddx42	100	75.270	ENSELUG00000020593	ddx42	100	73.679	Esox_lucius
ENSHCOG00000003357	ddx42	91	78.333	ENSFCAG00000003499	DDX42	83	78.562	Felis_catus
ENSHCOG00000003357	ddx42	96	75.456	ENSFALG00000004675	DDX42	69	78.553	Ficedula_albicollis
ENSHCOG00000003357	ddx42	99	69.765	ENSFDAG00000020516	DDX42	84	77.919	Fukomys_damarensis
ENSHCOG00000003357	ddx42	100	77.067	ENSFHEG00000023290	ddx42	86	82.886	Fundulus_heteroclitus
ENSHCOG00000003357	ddx42	83	79.632	ENSGMOG00000004595	ddx42	79	79.320	Gadus_morhua
ENSHCOG00000003357	ddx42	92	78.544	ENSGALG00000000581	DDX42	83	78.544	Gallus_gallus
ENSHCOG00000003357	ddx42	94	80.872	ENSGAFG00000011846	ddx42	95	78.837	Gambusia_affinis
ENSHCOG00000003357	ddx42	100	76.384	ENSGACG00000009782	ddx42	100	76.018	Gasterosteus_aculeatus
ENSHCOG00000003357	ddx42	91	79.257	ENSGAGG00000024411	DDX42	82	79.103	Gopherus_agassizii
ENSHCOG00000003357	ddx42	98	74.015	ENSGGOG00000006779	DDX42	88	82.222	Gorilla_gorilla
ENSHCOG00000003357	ddx42	100	78.180	ENSHBUG00000008705	ddx42	100	79.276	Haplochromis_burtoni
ENSHCOG00000003357	ddx42	99	67.387	ENSHGLG00000010024	DDX42	84	74.425	Heterocephalus_glaber_female
ENSHCOG00000003357	ddx42	95	57.377	ENSHGLG00100007138	-	77	60.623	Heterocephalus_glaber_male
ENSHCOG00000003357	ddx42	96	75.112	ENSHGLG00100004479	-	84	77.665	Heterocephalus_glaber_male
ENSHCOG00000003357	ddx42	99	76.438	ENSIPUG00000013327	ddx42	100	75.056	Ictalurus_punctatus
ENSHCOG00000003357	ddx42	99	72.957	ENSSTOG00000008922	DDX42	84	77.891	Ictidomys_tridecemlineatus
ENSHCOG00000003357	ddx42	99	70.390	ENSJJAG00000011727	Ddx42	84	78.289	Jaculus_jaculus
ENSHCOG00000003357	ddx42	100	78.970	ENSKMAG00000009914	ddx42	100	77.193	Kryptolebias_marmoratus
ENSHCOG00000003357	ddx42	99	72.204	ENSLACG00000013476	DDX42	97	71.920	Latimeria_chalumnae
ENSHCOG00000003357	ddx42	100	73.989	ENSLOCG00000011764	ddx42	100	73.552	Lepisosteus_oculatus
ENSHCOG00000003357	ddx42	99	75.982	ENSLAFG00000003249	DDX42	84	78.819	Loxodonta_africana
ENSHCOG00000003357	ddx42	96	75.336	ENSMFAG00000031356	DDX42	82	82.222	Macaca_fascicularis
ENSHCOG00000003357	ddx42	96	75.336	ENSMMUG00000016762	DDX42	87	82.222	Macaca_mulatta
ENSHCOG00000003357	ddx42	96	75.336	ENSMNEG00000038250	DDX42	83	82.222	Macaca_nemestrina
ENSHCOG00000003357	ddx42	96	75.336	ENSMLEG00000043080	DDX42	82	79.088	Mandrillus_leucophaeus
ENSHCOG00000003357	ddx42	100	95.833	ENSMAMG00000021888	ddx42	83	86.410	Mastacembelus_armatus
ENSHCOG00000003357	ddx42	100	78.289	ENSMZEG00005023103	ddx42	100	79.386	Maylandia_zebra
ENSHCOG00000003357	ddx42	92	78.544	ENSMGAG00000001822	DDX42	83	78.544	Meleagris_gallopavo
ENSHCOG00000003357	ddx42	96	75.559	ENSMAUG00000020774	-	85	81.875	Mesocricetus_auratus
ENSHCOG00000003357	ddx42	97	75.458	ENSMICG00000009952	DDX42	84	78.149	Microcebus_murinus
ENSHCOG00000003357	ddx42	99	70.410	ENSMOCG00000015504	Ddx42	85	78.372	Microtus_ochrogaster
ENSHCOG00000003357	ddx42	98	79.712	ENSMMOG00000016963	ddx42	80	82.817	Mola_mola
ENSHCOG00000003357	ddx42	55	81.489	ENSMODG00000009917	-	97	81.197	Monodelphis_domestica
ENSHCOG00000003357	ddx42	100	77.741	ENSMALG00000007800	ddx42	100	76.464	Monopterus_albus
ENSHCOG00000003357	ddx42	92	77.863	MGP_CAROLIEiJ_G0017314	Ddx42	84	77.863	Mus_caroli
ENSHCOG00000003357	ddx42	92	77.863	ENSMUSG00000020705	Ddx42	84	77.863	Mus_musculus
ENSHCOG00000003357	ddx42	75	89.515	MGP_PahariEiJ_G0018444	-	95	83.655	Mus_pahari
ENSHCOG00000003357	ddx42	92	77.735	MGP_SPRETEiJ_G0018158	Ddx42	84	77.735	Mus_spretus
ENSHCOG00000003357	ddx42	93	78.354	ENSMPUG00000014921	DDX42	83	77.947	Mustela_putorius_furo
ENSHCOG00000003357	ddx42	96	74.432	ENSMLUG00000011645	DDX42	82	77.580	Myotis_lucifugus
ENSHCOG00000003357	ddx42	99	70.086	ENSNGAG00000021897	Ddx42	85	77.990	Nannospalax_galili
ENSHCOG00000003357	ddx42	98	82.494	ENSNBRG00000004466	ddx42	100	79.029	Neolamprologus_brichardi
ENSHCOG00000003357	ddx42	97	74.594	ENSNLEG00000004248	DDX42	90	82.222	Nomascus_leucogenys
ENSHCOG00000003357	ddx42	75	72.374	ENSMEUG00000013227	-	69	71.708	Notamacropus_eugenii
ENSHCOG00000003357	ddx42	96	75.895	ENSOPRG00000014960	DDX42	83	78.846	Ochotona_princeps
ENSHCOG00000003357	ddx42	99	67.203	ENSODEG00000007810	DDX42	84	74.619	Octodon_degus
ENSHCOG00000003357	ddx42	100	78.180	ENSONIG00000000734	ddx42	100	79.276	Oreochromis_niloticus
ENSHCOG00000003357	ddx42	73	84.431	ENSOANG00000000265	DDX42	95	84.630	Ornithorhynchus_anatinus
ENSHCOG00000003357	ddx42	95	76.024	ENSOCUG00000004304	DDX42	77	77.834	Oryctolagus_cuniculus
ENSHCOG00000003357	ddx42	100	77.594	ENSORLG00000002395	ddx42	100	75.615	Oryzias_latipes
ENSHCOG00000003357	ddx42	100	77.729	ENSORLG00020011621	ddx42	100	75.965	Oryzias_latipes_hni
ENSHCOG00000003357	ddx42	100	77.619	ENSORLG00015004487	ddx42	100	76.185	Oryzias_latipes_hsok
ENSHCOG00000003357	ddx42	100	78.438	ENSOMEG00000020093	ddx42	100	78.084	Oryzias_melastigma
ENSHCOG00000003357	ddx42	99	69.362	ENSOGAG00000006872	DDX42	83	78.149	Otolemur_garnettii
ENSHCOG00000003357	ddx42	97	75.304	ENSOARG00000013540	DDX42	83	77.820	Ovis_aries
ENSHCOG00000003357	ddx42	98	74.015	ENSPPAG00000007496	DDX42	88	82.222	Pan_paniscus
ENSHCOG00000003357	ddx42	91	78.333	ENSPPRG00000002740	DDX42	83	78.562	Panthera_pardus
ENSHCOG00000003357	ddx42	91	78.333	ENSPTIG00000009932	DDX42	83	78.562	Panthera_tigris_altaica
ENSHCOG00000003357	ddx42	98	74.015	ENSPTRG00000009523	DDX42	88	82.222	Pan_troglodytes
ENSHCOG00000003357	ddx42	96	75.336	ENSPANG00000020990	DDX42	82	82.222	Papio_anubis
ENSHCOG00000003357	ddx42	100	77.855	ENSPKIG00000002901	ddx42	100	77.136	Paramormyrops_kingsleyae
ENSHCOG00000003357	ddx42	91	78.382	ENSPSIG00000010289	DDX42	95	78.471	Pelodiscus_sinensis
ENSHCOG00000003357	ddx42	97	81.818	ENSPMGG00000009323	ddx42	85	82.171	Periophthalmus_magnuspinnatus
ENSHCOG00000003357	ddx42	99	69.989	ENSPEMG00000006755	Ddx42	84	78.299	Peromyscus_maniculatus_bairdii
ENSHCOG00000003357	ddx42	88	70.511	ENSPMAG00000005580	ddx42	99	69.072	Petromyzon_marinus
ENSHCOG00000003357	ddx42	99	73.171	ENSPCIG00000009093	DDX42	83	77.244	Phascolarctos_cinereus
ENSHCOG00000003357	ddx42	100	81.295	ENSPFOG00000014104	ddx42	85	84.752	Poecilia_formosa
ENSHCOG00000003357	ddx42	100	81.055	ENSPLAG00000010522	ddx42	85	84.498	Poecilia_latipinna
ENSHCOG00000003357	ddx42	100	81.535	ENSPMEG00000010744	ddx42	84	85.006	Poecilia_mexicana
ENSHCOG00000003357	ddx42	100	81.303	ENSPREG00000009926	ddx42	83	84.625	Poecilia_reticulata
ENSHCOG00000003357	ddx42	96	72.849	ENSPPYG00000008531	DDX42	82	76.418	Pongo_abelii
ENSHCOG00000003357	ddx42	99	64.955	ENSPCAG00000002474	DDX42	81	74.153	Procavia_capensis
ENSHCOG00000003357	ddx42	97	67.525	ENSPCOG00000001559	DDX42	90	74.209	Propithecus_coquereli
ENSHCOG00000003357	ddx42	96	72.857	ENSPVAG00000000160	DDX42	77	80.389	Pteropus_vampyrus
ENSHCOG00000003357	ddx42	99	74.437	ENSPNYG00000013954	ddx42	97	78.776	Pundamilia_nyererei
ENSHCOG00000003357	ddx42	88	83.861	ENSPNAG00000017352	ddx42	86	81.436	Pygocentrus_nattereri
ENSHCOG00000003357	ddx42	92	77.735	ENSRNOG00000009474	Ddx42	84	77.735	Rattus_norvegicus
ENSHCOG00000003357	ddx42	96	75.336	ENSRBIG00000004781	DDX42	90	82.222	Rhinopithecus_bieti
ENSHCOG00000003357	ddx42	96	75.336	ENSRROG00000029794	DDX42	84	78.479	Rhinopithecus_roxellana
ENSHCOG00000003357	ddx42	98	74.194	ENSSBOG00000029624	DDX42	88	82.353	Saimiri_boliviensis_boliviensis
ENSHCOG00000003357	ddx42	82	47.281	ENSSHAG00000007919	-	75	57.143	Sarcophilus_harrisii
ENSHCOG00000003357	ddx42	99	73.055	ENSSHAG00000012896	-	82	78.005	Sarcophilus_harrisii
ENSHCOG00000003357	ddx42	89	85.507	ENSSFOG00015014064	ddx42	81	84.371	Scleropages_formosus
ENSHCOG00000003357	ddx42	100	77.875	ENSSMAG00000009077	ddx42	100	78.743	Scophthalmus_maximus
ENSHCOG00000003357	ddx42	100	79.353	ENSSDUG00000022221	ddx42	100	79.737	Seriola_dumerili
ENSHCOG00000003357	ddx42	100	78.405	ENSSLDG00000018483	ddx42	100	79.047	Seriola_lalandi_dorsalis
ENSHCOG00000003357	ddx42	93	78.272	ENSSARG00000009847	DDX42	84	77.735	Sorex_araneus
ENSHCOG00000003357	ddx42	99	70.343	ENSSPUG00000018806	DDX42	83	78.846	Sphenodon_punctatus
ENSHCOG00000003357	ddx42	94	82.771	ENSSPAG00000013055	ddx42	100	79.803	Stegastes_partitus
ENSHCOG00000003357	ddx42	88	80.291	ENSSSCG00000017289	DDX42	77	82.114	Sus_scrofa
ENSHCOG00000003357	ddx42	99	69.626	ENSTGUG00000001931	DDX42	83	78.645	Taeniopygia_guttata
ENSHCOG00000003357	ddx42	100	79.455	ENSTRUG00000010711	ddx42	99	84.978	Takifugu_rubripes
ENSHCOG00000003357	ddx42	88	76.502	ENSTBEG00000010159	DDX42	98	76.070	Tupaia_belangeri
ENSHCOG00000003357	ddx42	98	73.475	ENSTTRG00000006962	DDX42	83	79.204	Tursiops_truncatus
ENSHCOG00000003357	ddx42	96	75.299	ENSUAMG00000007321	DDX42	84	77.962	Ursus_americanus
ENSHCOG00000003357	ddx42	96	75.299	ENSUMAG00000017438	DDX42	84	77.452	Ursus_maritimus
ENSHCOG00000003357	ddx42	91	68.760	ENSVPAG00000009633	DDX42	75	75.789	Vicugna_pacos
ENSHCOG00000003357	ddx42	91	79.103	ENSVVUG00000006095	DDX42	83	78.691	Vulpes_vulpes
ENSHCOG00000003357	ddx42	98	72.300	ENSXETG00000003245	ddx42	83	76.501	Xenopus_tropicalis
ENSHCOG00000003357	ddx42	99	76.636	ENSXCOG00000017560	ddx42	97	80.026	Xiphophorus_couchianus
ENSHCOG00000003357	ddx42	100	77.938	ENSXMAG00000008138	ddx42	100	78.603	Xiphophorus_maculatus