EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003526 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4975 bases
Position: chrKV880456.1:65865-70839
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018735	Mitoc_L55	PF09776.9	1.7e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010488	-	549	-	ENSHCOP00000018735	182 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000003526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003526	zgc:171480	56	71.569	ENSAPOG00000002881	zgc:171480	71	71.569	Acanthochromis_polyacanthus
ENSHCOG00000003526	zgc:171480	68	65.600	ENSACIG00000001646	zgc:171480	92	65.600	Amphilophus_citrinellus
ENSHCOG00000003526	zgc:171480	68	59.854	ENSAOCG00000016155	zgc:171480	95	59.854	Amphiprion_ocellaris
ENSHCOG00000003526	zgc:171480	68	60.584	ENSAPEG00000022327	zgc:171480	95	60.584	Amphiprion_percula
ENSHCOG00000003526	zgc:171480	64	68.644	ENSATEG00000005625	zgc:171480	80	68.644	Anabas_testudineus
ENSHCOG00000003526	zgc:171480	61	52.101	ENSACAG00000006897	-	92	52.101	Anolis_carolinensis
ENSHCOG00000003526	zgc:171480	73	61.314	ENSACLG00000005172	zgc:171480	99	61.314	Astatotilapia_calliptera
ENSHCOG00000003526	zgc:171480	57	63.462	ENSAMXG00000043839	zgc:171480	79	63.462	Astyanax_mexicanus
ENSHCOG00000003526	zgc:171480	66	50.000	ENSCPBG00000001771	-	94	50.000	Chrysemys_picta_bellii
ENSHCOG00000003526	zgc:171480	64	61.207	ENSCSEG00000019533	zgc:171480	81	61.207	Cynoglossus_semilaevis
ENSHCOG00000003526	zgc:171480	57	59.615	ENSDARG00000043402	zgc:171480	77	59.615	Danio_rerio
ENSHCOG00000003526	zgc:171480	57	59.048	ENSELUG00000007716	zgc:171480	80	59.048	Esox_lucius
ENSHCOG00000003526	zgc:171480	51	47.312	ENSFALG00000001083	-	96	47.312	Ficedula_albicollis
ENSHCOG00000003526	zgc:171480	57	67.961	ENSFHEG00000000203	zgc:171480	74	67.961	Fundulus_heteroclitus
ENSHCOG00000003526	zgc:171480	51	79.348	ENSGMOG00000019009	zgc:171480	90	79.348	Gadus_morhua
ENSHCOG00000003526	zgc:171480	50	48.352	ENSGALG00000038820	-	80	52.174	Gallus_gallus
ENSHCOG00000003526	zgc:171480	63	65.217	ENSGAFG00000004832	-	78	65.217	Gambusia_affinis
ENSHCOG00000003526	zgc:171480	51	89.130	ENSGACG00000002136	zgc:171480	100	89.130	Gasterosteus_aculeatus
ENSHCOG00000003526	zgc:171480	51	54.348	ENSGAGG00000001806	-	74	54.348	Gopherus_agassizii
ENSHCOG00000003526	zgc:171480	73	61.314	ENSHBUG00000007895	zgc:171480	99	61.314	Haplochromis_burtoni
ENSHCOG00000003526	zgc:171480	57	59.048	ENSIPUG00000001273	mrpl55	80	59.048	Ictalurus_punctatus
ENSHCOG00000003526	zgc:171480	60	66.972	ENSKMAG00000002011	zgc:171480	86	66.972	Kryptolebias_marmoratus
ENSHCOG00000003526	zgc:171480	51	80.645	ENSLBEG00000010915	zgc:171480	74	80.645	Labrus_bergylta
ENSHCOG00000003526	zgc:171480	51	80.645	ENSLBEG00000016107	-	74	80.645	Labrus_bergylta
ENSHCOG00000003526	zgc:171480	57	61.905	ENSLACG00000016281	zgc:171480	80	61.905	Latimeria_chalumnae
ENSHCOG00000003526	zgc:171480	57	74.757	ENSMAMG00000022250	zgc:171480	70	74.757	Mastacembelus_armatus
ENSHCOG00000003526	zgc:171480	73	61.314	ENSMZEG00005015585	zgc:171480	99	61.314	Maylandia_zebra
ENSHCOG00000003526	zgc:171480	58	45.794	ENSMGAG00000002612	-	93	45.794	Meleagris_gallopavo
ENSHCOG00000003526	zgc:171480	62	54.867	ENSMMOG00000008740	-	87	54.867	Mola_mola
ENSHCOG00000003526	zgc:171480	58	69.524	ENSMALG00000019823	zgc:171480	83	69.524	Monopterus_albus
ENSHCOG00000003526	zgc:171480	73	61.314	ENSNBRG00000019447	zgc:171480	99	61.314	Neolamprologus_brichardi
ENSHCOG00000003526	zgc:171480	71	61.940	ENSONIG00000007645	zgc:171480	99	61.940	Oreochromis_niloticus
ENSHCOG00000003526	zgc:171480	52	67.368	ENSORLG00020006963	zgc:171480	71	67.368	Oryzias_latipes_hni
ENSHCOG00000003526	zgc:171480	52	68.421	ENSORLG00015003266	zgc:171480	71	68.421	Oryzias_latipes_hsok
ENSHCOG00000003526	zgc:171480	58	63.810	ENSOMEG00000008184	zgc:171480	77	63.810	Oryzias_melastigma
ENSHCOG00000003526	zgc:171480	67	55.200	ENSPKIG00000006753	zgc:171480	94	55.200	Paramormyrops_kingsleyae
ENSHCOG00000003526	zgc:171480	66	48.333	ENSPSIG00000010893	-	94	48.333	Pelodiscus_sinensis
ENSHCOG00000003526	zgc:171480	65	56.667	ENSPMGG00000012657	-	93	56.667	Periophthalmus_magnuspinnatus
ENSHCOG00000003526	zgc:171480	51	48.454	ENSPMAG00000000867	zgc:171480	82	47.917	Petromyzon_marinus
ENSHCOG00000003526	zgc:171480	62	47.500	ENSPCIG00000021848	-	94	47.500	Phascolarctos_cinereus
ENSHCOG00000003526	zgc:171480	63	66.087	ENSPFOG00000012703	zgc:171480	81	66.087	Poecilia_formosa
ENSHCOG00000003526	zgc:171480	63	66.957	ENSPREG00000020328	zgc:171480	81	66.957	Poecilia_reticulata
ENSHCOG00000003526	zgc:171480	57	64.762	ENSPNAG00000017309	zgc:171480	80	64.762	Pygocentrus_nattereri
ENSHCOG00000003526	zgc:171480	66	54.918	ENSSFOG00015015668	mrpl55	93	54.918	Scleropages_formosus
ENSHCOG00000003526	zgc:171480	65	66.142	ENSSMAG00000005429	zgc:171480	91	66.142	Scophthalmus_maximus
ENSHCOG00000003526	zgc:171480	64	70.940	ENSSDUG00000022556	zgc:171480	78	70.940	Seriola_dumerili
ENSHCOG00000003526	zgc:171480	64	70.085	ENSSLDG00000019598	zgc:171480	78	70.085	Seriola_lalandi_dorsalis
ENSHCOG00000003526	zgc:171480	53	50.000	ENSSPUG00000000735	-	77	50.000	Sphenodon_punctatus
ENSHCOG00000003526	zgc:171480	68	61.940	ENSSPAG00000011598	zgc:171480	95	61.940	Stegastes_partitus
ENSHCOG00000003526	zgc:171480	71	56.154	ENSTRUG00000003082	zgc:171480	87	56.154	Takifugu_rubripes
ENSHCOG00000003526	zgc:171480	66	62.500	ENSXCOG00000005887	zgc:171480	93	62.500	Xiphophorus_couchianus
ENSHCOG00000003526	zgc:171480	63	62.609	ENSXMAG00000007937	zgc:171480	81	62.609	Xiphophorus_maculatus