EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003651 (Gene tree)
Gene ID: 109512402
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 15500 bases
Position: chrKV879821.1:1738999-1754498
Accession: 109512402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002454	tRNA-synt_1g	PF09334.11	5.5e-17	1	2
ENSHCOP00000002454	tRNA-synt_1g	PF09334.11	5.5e-17	2	2
ENSHCOP00000002454	Anticodon_1	PF08264.13	1.9e-14	1	1
ENSHCOP00000002454	tRNA-synt_1	PF00133.22	1e-37	1	2
ENSHCOP00000002454	tRNA-synt_1	PF00133.22	1e-37	2	2
ENSHCOP00000002454	tRNA-synt_1e	PF01406.19	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010395	-	4122	XM_019864140	ENSHCOP00000002454	1183 (aa)	XP_019719699	UPI00094EC638

Gene Model

Click here to download ENSHCOG00000003651's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003651	larsb	100	77.008	ENSG00000133706	LARS	99	77.837	Homo_sapiens
ENSHCOG00000003651	larsb	100	90.802	ENSAPOG00000010585	larsb	100	91.696	Acanthochromis_polyacanthus
ENSHCOG00000003651	larsb	99	77.684	ENSAMEG00000017584	LARS	99	77.684	Ailuropoda_melanoleuca
ENSHCOG00000003651	larsb	100	89.283	ENSACIG00000014026	larsb	99	89.217	Amphilophus_citrinellus
ENSHCOG00000003651	larsb	100	91.293	ENSAOCG00000016931	larsb	99	91.293	Amphiprion_ocellaris
ENSHCOG00000003651	larsb	100	91.378	ENSAPEG00000017720	larsb	99	91.378	Amphiprion_percula
ENSHCOG00000003651	larsb	100	86.582	ENSATEG00000010441	larsb	99	86.498	Anabas_testudineus
ENSHCOG00000003651	larsb	96	78.528	ENSAPLG00000008145	LARS	99	78.878	Anas_platyrhynchos
ENSHCOG00000003651	larsb	100	76.500	ENSACAG00000013916	LARS	99	76.585	Anolis_carolinensis
ENSHCOG00000003651	larsb	100	68.893	ENSANAG00000014375	LARS	99	68.893	Aotus_nancymaae
ENSHCOG00000003651	larsb	100	91.293	ENSACLG00000010881	larsb	99	91.293	Astatotilapia_calliptera
ENSHCOG00000003651	larsb	100	85.642	ENSAMXG00000019979	larsb	99	85.642	Astyanax_mexicanus
ENSHCOG00000003651	larsb	100	77.092	ENSBTAG00000006765	LARS	99	77.138	Bos_taurus
ENSHCOG00000003651	larsb	99	55.537	WBGene00003073	lars-1	99	55.537	Caenorhabditis_elegans
ENSHCOG00000003651	larsb	100	77.008	ENSCJAG00000021314	LARS	99	77.837	Callithrix_jacchus
ENSHCOG00000003651	larsb	100	78.022	ENSCAFG00000006431	LARS	99	78.022	Canis_familiaris
ENSHCOG00000003651	larsb	99	78.069	ENSCAFG00020025009	LARS	99	78.069	Canis_lupus_dingo
ENSHCOG00000003651	larsb	100	77.261	ENSCHIG00000014949	LARS	99	77.261	Capra_hircus
ENSHCOG00000003651	larsb	100	76.923	ENSTSYG00000001253	LARS	99	76.923	Carlito_syrichta
ENSHCOG00000003651	larsb	96	61.053	ENSCAPG00000015676	LARS	97	61.228	Cavia_aperea
ENSHCOG00000003651	larsb	100	75.824	ENSCPOG00000012329	LARS	99	75.824	Cavia_porcellus
ENSHCOG00000003651	larsb	100	77.599	ENSCCAG00000020789	LARS	99	77.646	Cebus_capucinus
ENSHCOG00000003651	larsb	98	77.076	ENSCATG00000033463	LARS	99	77.837	Cercocebus_atys
ENSHCOG00000003651	larsb	100	76.416	ENSCLAG00000011193	LARS	99	76.416	Chinchilla_lanigera
ENSHCOG00000003651	larsb	99	77.028	ENSCSAG00000012280	LARS	97	77.028	Chlorocebus_sabaeus
ENSHCOG00000003651	larsb	90	70.748	ENSCHOG00000009309	LARS	90	70.748	Choloepus_hoffmanni
ENSHCOG00000003651	larsb	99	79.019	ENSCPBG00000008415	LARS	99	79.821	Chrysemys_picta_bellii
ENSHCOG00000003651	larsb	98	63.870	ENSCING00000008535	-	98	63.185	Ciona_intestinalis
ENSHCOG00000003651	larsb	99	62.932	ENSCSAVG00000009040	-	100	67.975	Ciona_savignyi
ENSHCOG00000003651	larsb	100	77.008	ENSCANG00000031137	LARS	99	77.053	Colobus_angolensis_palliatus
ENSHCOG00000003651	larsb	93	71.949	ENSCGRG00001004647	Lars	99	71.818	Cricetulus_griseus_chok1gshd
ENSHCOG00000003651	larsb	100	73.733	ENSCGRG00000007284	Lars	99	73.733	Cricetulus_griseus_crigri
ENSHCOG00000003651	larsb	100	90.802	ENSCSEG00000014984	larsb	99	90.717	Cynoglossus_semilaevis
ENSHCOG00000003651	larsb	100	91.040	ENSCVAG00000014685	larsb	99	91.040	Cyprinodon_variegatus
ENSHCOG00000003651	larsb	68	86.358	ENSDARG00000019280	larsb	100	86.358	Danio_rerio
ENSHCOG00000003651	larsb	96	76.923	ENSDNOG00000017963	LARS	99	77.448	Dasypus_novemcinctus
ENSHCOG00000003651	larsb	100	72.068	ENSDORG00000014913	Lars	99	72.274	Dipodomys_ordii
ENSHCOG00000003651	larsb	99	57.886	FBgn0284253	LeuRS	99	58.305	Drosophila_melanogaster
ENSHCOG00000003651	larsb	94	62.657	ENSETEG00000003145	LARS	100	62.657	Echinops_telfairi
ENSHCOG00000003651	larsb	92	60.200	ENSEBUG00000014985	larsb	97	59.054	Eptatretus_burgeri
ENSHCOG00000003651	larsb	100	77.684	ENSEASG00005020569	LARS	99	77.849	Equus_asinus_asinus
ENSHCOG00000003651	larsb	100	77.599	ENSECAG00000008963	LARS	99	78.369	Equus_caballus
ENSHCOG00000003651	larsb	92	62.830	ENSEEUG00000014854	LARS	92	62.830	Erinaceus_europaeus
ENSHCOG00000003651	larsb	100	84.784	ENSELUG00000023311	larsb	99	84.784	Esox_lucius
ENSHCOG00000003651	larsb	99	77.477	ENSFCAG00000008715	LARS	100	79.139	Felis_catus
ENSHCOG00000003651	larsb	100	78.125	ENSFALG00000003209	LARS	93	78.209	Ficedula_albicollis
ENSHCOG00000003651	larsb	100	75.993	ENSFDAG00000020764	LARS	99	75.993	Fukomys_damarensis
ENSHCOG00000003651	larsb	91	91.495	ENSFHEG00000010437	larsb	99	91.495	Fundulus_heteroclitus
ENSHCOG00000003651	larsb	99	84.687	ENSGMOG00000013645	larsb	99	84.687	Gadus_morhua
ENSHCOG00000003651	larsb	100	79.072	ENSGALG00000007494	LARS	98	80.292	Gallus_gallus
ENSHCOG00000003651	larsb	100	89.941	ENSGAFG00000005029	larsb	99	89.941	Gambusia_affinis
ENSHCOG00000003651	larsb	99	88.579	ENSGACG00000020720	larsb	99	88.579	Gasterosteus_aculeatus
ENSHCOG00000003651	larsb	99	78.257	ENSGAGG00000002353	LARS	99	78.173	Gopherus_agassizii
ENSHCOG00000003651	larsb	100	76.923	ENSGGOG00000004103	LARS	99	76.969	Gorilla_gorilla
ENSHCOG00000003651	larsb	99	89.550	ENSHBUG00000003051	larsb	100	91.833	Haplochromis_burtoni
ENSHCOG00000003651	larsb	100	76.331	ENSHGLG00000006937	LARS	99	76.331	Heterocephalus_glaber_female
ENSHCOG00000003651	larsb	100	76.331	ENSHGLG00100002801	LARS	99	76.331	Heterocephalus_glaber_male
ENSHCOG00000003651	larsb	100	83.361	ENSIPUG00000010756	lars	100	83.948	Ictalurus_punctatus
ENSHCOG00000003651	larsb	100	76.923	ENSSTOG00000002356	LARS	99	76.923	Ictidomys_tridecemlineatus
ENSHCOG00000003651	larsb	100	75.909	ENSJJAG00000015265	Lars	99	75.909	Jaculus_jaculus
ENSHCOG00000003651	larsb	100	90.878	ENSKMAG00000009903	larsb	99	91.132	Kryptolebias_marmoratus
ENSHCOG00000003651	larsb	100	90.372	ENSLBEG00000025237	larsb	99	90.372	Labrus_bergylta
ENSHCOG00000003651	larsb	100	78.565	ENSLACG00000009321	LARS	99	79.072	Latimeria_chalumnae
ENSHCOG00000003651	larsb	100	81.741	ENSLOCG00000010442	larsb	100	81.572	Lepisosteus_oculatus
ENSHCOG00000003651	larsb	99	76.799	ENSLAFG00000000318	LARS	99	76.799	Loxodonta_africana
ENSHCOG00000003651	larsb	100	77.008	ENSMFAG00000038685	LARS	99	77.114	Macaca_fascicularis
ENSHCOG00000003651	larsb	100	77.008	ENSMMUG00000029787	LARS	99	77.008	Macaca_mulatta
ENSHCOG00000003651	larsb	99	75.106	ENSMNEG00000044014	LARS	99	75.106	Macaca_nemestrina
ENSHCOG00000003651	larsb	99	77.053	ENSMLEG00000037563	LARS	99	77.053	Mandrillus_leucophaeus
ENSHCOG00000003651	larsb	100	91.209	ENSMAMG00000021385	larsb	99	91.209	Mastacembelus_armatus
ENSHCOG00000003651	larsb	100	91.209	ENSMZEG00005002662	larsb	99	91.209	Maylandia_zebra
ENSHCOG00000003651	larsb	96	79.141	ENSMGAG00000009388	LARS	99	79.579	Meleagris_gallopavo
ENSHCOG00000003651	larsb	99	66.723	ENSMAUG00000003063	Lars	93	77.966	Mesocricetus_auratus
ENSHCOG00000003651	larsb	100	64.413	ENSMICG00000035435	-	99	64.413	Microcebus_murinus
ENSHCOG00000003651	larsb	100	77.853	ENSMICG00000035589	-	99	77.900	Microcebus_murinus
ENSHCOG00000003651	larsb	100	75.845	ENSMOCG00000002092	Lars	99	75.845	Microtus_ochrogaster
ENSHCOG00000003651	larsb	100	87.679	ENSMMOG00000013802	larsb	99	87.595	Mola_mola
ENSHCOG00000003651	larsb	99	72.142	ENSMODG00000010231	LARS	99	72.142	Monodelphis_domestica
ENSHCOG00000003651	larsb	99	87.963	ENSMALG00000018444	larsb	99	87.963	Monopterus_albus
ENSHCOG00000003651	larsb	100	75.929	MGP_CAROLIEiJ_G0022225	Lars	99	75.929	Mus_caroli
ENSHCOG00000003651	larsb	100	75.591	ENSMUSG00000024493	Lars	99	75.591	Mus_musculus
ENSHCOG00000003651	larsb	100	75.676	MGP_PahariEiJ_G0018958	Lars	99	75.676	Mus_pahari
ENSHCOG00000003651	larsb	100	76.014	MGP_SPRETEiJ_G0023135	Lars	99	76.014	Mus_spretus
ENSHCOG00000003651	larsb	100	77.599	ENSMPUG00000007844	LARS	99	77.599	Mustela_putorius_furo
ENSHCOG00000003651	larsb	99	76.650	ENSMLUG00000001125	LARS	99	76.650	Myotis_lucifugus
ENSHCOG00000003651	larsb	100	75.148	ENSNGAG00000011596	Lars	99	75.148	Nannospalax_galili
ENSHCOG00000003651	larsb	100	90.955	ENSNBRG00000005764	larsb	99	90.955	Neolamprologus_brichardi
ENSHCOG00000003651	larsb	99	76.715	ENSNLEG00000009816	LARS	99	76.715	Nomascus_leucogenys
ENSHCOG00000003651	larsb	53	81.081	ENSMEUG00000002332	-	60	73.868	Notamacropus_eugenii
ENSHCOG00000003651	larsb	78	80.108	ENSOPRG00000003076	LARS	83	80.645	Ochotona_princeps
ENSHCOG00000003651	larsb	99	74.344	ENSODEG00000004882	LARS	99	74.344	Octodon_degus
ENSHCOG00000003651	larsb	100	91.209	ENSONIG00000008493	larsb	99	91.209	Oreochromis_niloticus
ENSHCOG00000003651	larsb	100	75.189	ENSOANG00000005755	LARS	99	75.189	Ornithorhynchus_anatinus
ENSHCOG00000003651	larsb	100	77.599	ENSOCUG00000015684	LARS	99	77.599	Oryctolagus_cuniculus
ENSHCOG00000003651	larsb	100	90.279	ENSORLG00000001622	larsb	99	90.279	Oryzias_latipes
ENSHCOG00000003651	larsb	100	90.448	ENSORLG00020019950	larsb	99	90.448	Oryzias_latipes_hni
ENSHCOG00000003651	larsb	100	90.363	ENSORLG00015003895	larsb	99	90.363	Oryzias_latipes_hsok
ENSHCOG00000003651	larsb	100	90.279	ENSOMEG00000005677	larsb	99	90.378	Oryzias_melastigma
ENSHCOG00000003651	larsb	96	75.523	ENSOGAG00000008750	LARS	99	75.523	Otolemur_garnettii
ENSHCOG00000003651	larsb	100	77.008	ENSOARG00000015911	-	99	77.008	Ovis_aries
ENSHCOG00000003651	larsb	99	77.073	ENSOARG00000002454	-	99	77.073	Ovis_aries
ENSHCOG00000003651	larsb	99	76.969	ENSPPAG00000027964	LARS	99	76.969	Pan_paniscus
ENSHCOG00000003651	larsb	100	77.599	ENSPPRG00000023492	LARS	99	77.599	Panthera_pardus
ENSHCOG00000003651	larsb	100	77.599	ENSPTIG00000013110	LARS	99	77.599	Panthera_tigris_altaica
ENSHCOG00000003651	larsb	100	76.839	ENSPTRG00000017372	LARS	99	76.884	Pan_troglodytes
ENSHCOG00000003651	larsb	100	77.008	ENSPANG00000002663	LARS	99	77.053	Papio_anubis
ENSHCOG00000003651	larsb	98	83.232	ENSPKIG00000006650	larsb	99	80.792	Paramormyrops_kingsleyae
ENSHCOG00000003651	larsb	99	78.342	ENSPSIG00000015641	LARS	99	78.257	Pelodiscus_sinensis
ENSHCOG00000003651	larsb	68	90.989	ENSPMGG00000019556	LARS	99	90.989	Periophthalmus_magnuspinnatus
ENSHCOG00000003651	larsb	100	72.128	ENSPEMG00000010933	Lars	99	72.128	Peromyscus_maniculatus_bairdii
ENSHCOG00000003651	larsb	50	59.867	ENSPMAG00000005301	larsb	99	59.867	Petromyzon_marinus
ENSHCOG00000003651	larsb	100	75.571	ENSPCIG00000030572	LARS	99	75.571	Phascolarctos_cinereus
ENSHCOG00000003651	larsb	100	90.617	ENSPFOG00000002361	larsb	99	90.617	Poecilia_formosa
ENSHCOG00000003651	larsb	100	90.533	ENSPLAG00000016550	larsb	99	90.533	Poecilia_latipinna
ENSHCOG00000003651	larsb	100	90.448	ENSPMEG00000018422	larsb	99	90.448	Poecilia_mexicana
ENSHCOG00000003651	larsb	100	90.363	ENSPREG00000005668	larsb	99	90.363	Poecilia_reticulata
ENSHCOG00000003651	larsb	99	75.212	ENSPPYG00000015908	LARS	97	75.212	Pongo_abelii
ENSHCOG00000003651	larsb	89	66.667	ENSPCAG00000005621	LARS	96	62.832	Procavia_capensis
ENSHCOG00000003651	larsb	100	76.416	ENSPCOG00000019325	LARS	99	76.416	Propithecus_coquereli
ENSHCOG00000003651	larsb	96	68.739	ENSPVAG00000011237	LARS	99	69.264	Pteropus_vampyrus
ENSHCOG00000003651	larsb	100	91.209	ENSPNYG00000015254	larsb	99	91.209	Pundamilia_nyererei
ENSHCOG00000003651	larsb	100	83.855	ENSPNAG00000027191	larsb	99	83.855	Pygocentrus_nattereri
ENSHCOG00000003651	larsb	100	75.676	ENSRNOG00000018304	Lars	99	75.676	Rattus_norvegicus
ENSHCOG00000003651	larsb	94	75.763	ENSRBIG00000043198	LARS	99	75.763	Rhinopithecus_bieti
ENSHCOG00000003651	larsb	90	45.298	YPL160W	CDC60	99	45.298	Saccharomyces_cerevisiae
ENSHCOG00000003651	larsb	99	74.852	ENSSBOG00000026661	LARS	99	77.768	Saimiri_boliviensis_boliviensis
ENSHCOG00000003651	larsb	100	77.280	ENSSHAG00000006084	LARS	99	77.280	Sarcophilus_harrisii
ENSHCOG00000003651	larsb	97	84.514	ENSSFOG00015018117	larsb	90	84.514	Scleropages_formosus
ENSHCOG00000003651	larsb	88	92.234	ENSSMAG00000004078	larsb	97	92.330	Scophthalmus_maximus
ENSHCOG00000003651	larsb	100	91.293	ENSSDUG00000021142	larsb	99	91.293	Seriola_dumerili
ENSHCOG00000003651	larsb	100	91.378	ENSSLDG00000007054	larsb	99	91.378	Seriola_lalandi_dorsalis
ENSHCOG00000003651	larsb	85	72.143	ENSSARG00000013481	LARS	83	77.119	Sorex_araneus
ENSHCOG00000003651	larsb	100	77.722	ENSSPUG00000013805	LARS	99	78.312	Sphenodon_punctatus
ENSHCOG00000003651	larsb	100	91.801	ENSSPAG00000012124	larsb	99	91.801	Stegastes_partitus
ENSHCOG00000003651	larsb	100	74.387	ENSSSCG00000014411	LARS	99	74.387	Sus_scrofa
ENSHCOG00000003651	larsb	99	78.173	ENSTGUG00000000092	-	99	78.257	Taeniopygia_guttata
ENSHCOG00000003651	larsb	100	88.588	ENSTRUG00000005358	larsb	99	88.588	Takifugu_rubripes
ENSHCOG00000003651	larsb	99	84.007	ENSTNIG00000018214	larsb	99	84.091	Tetraodon_nigroviridis
ENSHCOG00000003651	larsb	91	74.704	ENSTBEG00000003757	LARS	94	74.704	Tupaia_belangeri
ENSHCOG00000003651	larsb	96	75.175	ENSTTRG00000016712	LARS	96	75.175	Tursiops_truncatus
ENSHCOG00000003651	larsb	94	78.315	ENSUAMG00000019907	LARS	99	78.315	Ursus_americanus
ENSHCOG00000003651	larsb	100	77.599	ENSUMAG00000010585	LARS	99	77.599	Ursus_maritimus
ENSHCOG00000003651	larsb	92	76.975	ENSVPAG00000000557	LARS	92	76.975	Vicugna_pacos
ENSHCOG00000003651	larsb	100	77.937	ENSVVUG00000021124	LARS	99	77.937	Vulpes_vulpes
ENSHCOG00000003651	larsb	100	78.903	ENSXETG00000002320	lars	99	78.819	Xenopus_tropicalis
ENSHCOG00000003651	larsb	100	89.772	ENSXMAG00000001454	larsb	99	89.772	Xiphophorus_maculatus