EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003665 (Gene tree)
Gene ID: 109526494
Gene Symbol: mrm1
Alias: si:dkey-189h5.1
Full Name: mitochondrial rRNA methyltransferase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 1499 bases
Position: chrKV880261.1:380561-382059
Accession: 109526494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018820	SpoU_sub_bind	PF08032.12	5e-14	1	1
ENSHCOP00000018820	SpoU_methylase	PF00588.19	1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010282	-	1499	XM_019887792	ENSHCOP00000018820	353 (aa)	XP_019743351	UPI00094E813A

Gene Model

Click here to download ENSHCOG00000003665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003665	mrm1	80	48.264	ENSG00000278619	MRM1	78	48.264	Homo_sapiens
ENSHCOG00000003665	mrm1	99	57.853	ENSAPOG00000016309	mrm1	95	57.853	Acanthochromis_polyacanthus
ENSHCOG00000003665	mrm1	84	46.382	ENSAMEG00000008301	MRM1	82	46.382	Ailuropoda_melanoleuca
ENSHCOG00000003665	mrm1	81	68.512	ENSACIG00000012244	mrm1	75	68.512	Amphilophus_citrinellus
ENSHCOG00000003665	mrm1	99	59.686	ENSAOCG00000000362	mrm1	95	59.686	Amphiprion_ocellaris
ENSHCOG00000003665	mrm1	99	59.424	ENSAPEG00000004511	mrm1	95	59.424	Amphiprion_percula
ENSHCOG00000003665	mrm1	72	50.570	ENSAPLG00000006433	MRM1	84	50.951	Anas_platyrhynchos
ENSHCOG00000003665	mrm1	74	47.584	ENSACAG00000002573	MRM1	83	47.584	Anolis_carolinensis
ENSHCOG00000003665	mrm1	80	46.528	ENSANAG00000025500	MRM1	79	46.528	Aotus_nancymaae
ENSHCOG00000003665	mrm1	78	68.953	ENSACLG00000023745	mrm1	98	68.512	Astatotilapia_calliptera
ENSHCOG00000003665	mrm1	80	55.705	ENSAMXG00000007295	mrm1	74	55.705	Astyanax_mexicanus
ENSHCOG00000003665	mrm1	80	55.705	ENSAMXG00000030596	mrm1	74	55.705	Astyanax_mexicanus
ENSHCOG00000003665	mrm1	81	46.959	ENSBTAG00000010311	MRM1	78	47.766	Bos_taurus
ENSHCOG00000003665	mrm1	72	31.154	WBGene00012864	Y45F3A.9	86	31.154	Caenorhabditis_elegans
ENSHCOG00000003665	mrm1	81	45.392	ENSCJAG00000001023	MRM1	80	45.392	Callithrix_jacchus
ENSHCOG00000003665	mrm1	79	47.719	ENSCAFG00000017849	MRM1	80	47.719	Canis_familiaris
ENSHCOG00000003665	mrm1	79	47.719	ENSCAFG00020002377	MRM1	80	47.719	Canis_lupus_dingo
ENSHCOG00000003665	mrm1	81	46.622	ENSCHIG00000008558	MRM1	78	47.423	Capra_hircus
ENSHCOG00000003665	mrm1	84	46.104	ENSTSYG00000036380	MRM1	80	46.405	Carlito_syrichta
ENSHCOG00000003665	mrm1	81	46.416	ENSCPOG00000004283	MRM1	78	47.222	Cavia_porcellus
ENSHCOG00000003665	mrm1	78	46.643	ENSCCAG00000020032	MRM1	77	46.643	Cebus_capucinus
ENSHCOG00000003665	mrm1	80	47.917	ENSCATG00000041516	MRM1	78	47.917	Cercocebus_atys
ENSHCOG00000003665	mrm1	80	47.222	ENSCLAG00000010960	MRM1	77	47.222	Chinchilla_lanigera
ENSHCOG00000003665	mrm1	78	48.410	ENSCSAG00000006055	MRM1	76	48.410	Chlorocebus_sabaeus
ENSHCOG00000003665	mrm1	77	46.014	ENSCPBG00000009581	MRM1	59	46.014	Chrysemys_picta_bellii
ENSHCOG00000003665	mrm1	78	48.057	ENSCANG00000025543	MRM1	76	48.057	Colobus_angolensis_palliatus
ENSHCOG00000003665	mrm1	81	48.495	ENSCGRG00001001937	Mrm1	88	48.495	Cricetulus_griseus_chok1gshd
ENSHCOG00000003665	mrm1	81	48.495	ENSCGRG00000009593	Mrm1	88	48.495	Cricetulus_griseus_crigri
ENSHCOG00000003665	mrm1	83	65.541	ENSCSEG00000014575	mrm1	79	65.541	Cynoglossus_semilaevis
ENSHCOG00000003665	mrm1	80	65.845	ENSCVAG00000012104	mrm1	74	65.845	Cyprinodon_variegatus
ENSHCOG00000003665	mrm1	54	60.714	ENSDARG00000059658	mrm1	98	60.714	Danio_rerio
ENSHCOG00000003665	mrm1	85	37.829	ENSDNOG00000035159	MRM1	82	37.829	Dasypus_novemcinctus
ENSHCOG00000003665	mrm1	59	51.598	ENSDORG00000013267	Mrm1	93	51.598	Dipodomys_ordii
ENSHCOG00000003665	mrm1	67	44.578	ENSETEG00000000378	MRM1	91	44.400	Echinops_telfairi
ENSHCOG00000003665	mrm1	80	48.958	ENSEASG00005002123	MRM1	79	48.958	Equus_asinus_asinus
ENSHCOG00000003665	mrm1	80	48.264	ENSECAG00000025139	MRM1	79	48.264	Equus_caballus
ENSHCOG00000003665	mrm1	54	41.919	ENSEEUG00000013434	-	85	41.414	Erinaceus_europaeus
ENSHCOG00000003665	mrm1	84	60.000	ENSELUG00000012392	mrm1	70	60.000	Esox_lucius
ENSHCOG00000003665	mrm1	87	43.450	ENSFCAG00000031667	MRM1	85	43.450	Felis_catus
ENSHCOG00000003665	mrm1	63	51.316	ENSFDAG00000018545	MRM1	76	51.316	Fukomys_damarensis
ENSHCOG00000003665	mrm1	82	64.261	ENSFHEG00000005529	mrm1	85	61.755	Fundulus_heteroclitus
ENSHCOG00000003665	mrm1	67	51.429	ENSGALG00000039523	MRM1	96	51.429	Gallus_gallus
ENSHCOG00000003665	mrm1	81	64.583	ENSGAFG00000012959	mrm1	78	64.583	Gambusia_affinis
ENSHCOG00000003665	mrm1	71	73.228	ENSGACG00000004024	mrm1	96	73.228	Gasterosteus_aculeatus
ENSHCOG00000003665	mrm1	79	46.316	ENSGAGG00000000908	MRM1	70	46.316	Gopherus_agassizii
ENSHCOG00000003665	mrm1	78	48.410	ENSGGOG00000007979	MRM1	77	48.410	Gorilla_gorilla
ENSHCOG00000003665	mrm1	78	68.705	ENSHBUG00000004484	mrm1	97	68.881	Haplochromis_burtoni
ENSHCOG00000003665	mrm1	81	46.416	ENSHGLG00000008701	MRM1	78	47.222	Heterocephalus_glaber_female
ENSHCOG00000003665	mrm1	59	51.613	ENSHGLG00100012646	MRM1	74	51.835	Heterocephalus_glaber_male
ENSHCOG00000003665	mrm1	92	52.632	ENSIPUG00000022357	mrm1	87	52.632	Ictalurus_punctatus
ENSHCOG00000003665	mrm1	81	46.416	ENSSTOG00000002422	MRM1	84	46.416	Ictidomys_tridecemlineatus
ENSHCOG00000003665	mrm1	78	48.252	ENSJJAG00000010068	Mrm1	91	48.252	Jaculus_jaculus
ENSHCOG00000003665	mrm1	82	66.667	ENSLBEG00000009581	mrm1	99	66.667	Labrus_bergylta
ENSHCOG00000003665	mrm1	78	47.719	ENSLACG00000017664	MRM1	97	47.719	Latimeria_chalumnae
ENSHCOG00000003665	mrm1	81	57.679	ENSLOCG00000004945	mrm1	93	57.679	Lepisosteus_oculatus
ENSHCOG00000003665	mrm1	81	45.946	ENSLAFG00000012584	MRM1	85	46.735	Loxodonta_africana
ENSHCOG00000003665	mrm1	80	48.264	ENSMFAG00000032112	MRM1	79	48.264	Macaca_fascicularis
ENSHCOG00000003665	mrm1	80	48.264	ENSMMUG00000000622	MRM1	80	48.264	Macaca_mulatta
ENSHCOG00000003665	mrm1	80	48.264	ENSMNEG00000044557	MRM1	79	48.264	Macaca_nemestrina
ENSHCOG00000003665	mrm1	78	48.763	ENSMLEG00000031933	MRM1	76	48.763	Mandrillus_leucophaeus
ENSHCOG00000003665	mrm1	78	69.176	ENSMAMG00000007018	mrm1	96	68.385	Mastacembelus_armatus
ENSHCOG00000003665	mrm1	78	68.953	ENSMZEG00005008320	mrm1	98	68.512	Maylandia_zebra
ENSHCOG00000003665	mrm1	81	47.635	ENSMAUG00000020976	Mrm1	88	47.635	Mesocricetus_auratus
ENSHCOG00000003665	mrm1	80	47.222	ENSMICG00000004216	MRM1	83	47.222	Microcebus_murinus
ENSHCOG00000003665	mrm1	80	67.241	ENSMMOG00000001468	mrm1	87	67.241	Mola_mola
ENSHCOG00000003665	mrm1	73	46.269	ENSMODG00000003307	MRM1	63	46.269	Monodelphis_domestica
ENSHCOG00000003665	mrm1	80	68.772	ENSMALG00000014364	mrm1	95	68.367	Monopterus_albus
ENSHCOG00000003665	mrm1	81	47.973	MGP_CAROLIEiJ_G0016896	Mrm1	86	48.454	Mus_caroli
ENSHCOG00000003665	mrm1	81	47.973	ENSMUSG00000018405	Mrm1	86	48.454	Mus_musculus
ENSHCOG00000003665	mrm1	81	47.635	MGP_PahariEiJ_G0018026	Mrm1	86	48.110	Mus_pahari
ENSHCOG00000003665	mrm1	81	47.973	MGP_SPRETEiJ_G0017741	Mrm1	86	48.454	Mus_spretus
ENSHCOG00000003665	mrm1	73	47.388	ENSMPUG00000015063	MRM1	78	46.048	Mustela_putorius_furo
ENSHCOG00000003665	mrm1	85	44.373	ENSMLUG00000013208	MRM1	84	45.098	Myotis_lucifugus
ENSHCOG00000003665	mrm1	87	43.949	ENSNGAG00000019175	Mrm1	91	44.660	Nannospalax_galili
ENSHCOG00000003665	mrm1	78	68.592	ENSNBRG00000023533	mrm1	98	68.166	Neolamprologus_brichardi
ENSHCOG00000003665	mrm1	78	48.763	ENSNLEG00000002300	MRM1	76	48.763	Nomascus_leucogenys
ENSHCOG00000003665	mrm1	82	44.631	ENSOPRG00000012866	MRM1	81	45.392	Ochotona_princeps
ENSHCOG00000003665	mrm1	78	69.203	ENSONIG00000021236	mrm1	99	68.750	Oreochromis_niloticus
ENSHCOG00000003665	mrm1	84	45.902	ENSOCUG00000012149	MRM1	81	45.902	Oryctolagus_cuniculus
ENSHCOG00000003665	mrm1	82	65.529	ENSORLG00000025876	mrm1	96	65.529	Oryzias_latipes
ENSHCOG00000003665	mrm1	81	65.052	ENSORLG00020021701	mrm1	95	65.052	Oryzias_latipes_hni
ENSHCOG00000003665	mrm1	81	66.436	ENSORLG00015020702	mrm1	95	66.436	Oryzias_latipes_hsok
ENSHCOG00000003665	mrm1	82	65.529	ENSOMEG00000003504	mrm1	96	65.529	Oryzias_melastigma
ENSHCOG00000003665	mrm1	80	46.875	ENSOGAG00000013785	MRM1	87	46.875	Otolemur_garnettii
ENSHCOG00000003665	mrm1	81	46.622	ENSOARG00000018616	MRM1	78	47.423	Ovis_aries
ENSHCOG00000003665	mrm1	78	48.763	ENSPPAG00000043135	MRM1	77	48.763	Pan_paniscus
ENSHCOG00000003665	mrm1	87	43.450	ENSPPRG00000023620	MRM1	85	43.450	Panthera_pardus
ENSHCOG00000003665	mrm1	71	46.304	ENSPTIG00000009829	MRM1	88	47.222	Panthera_tigris_altaica
ENSHCOG00000003665	mrm1	78	48.763	ENSPTRG00000009049	MRM1	76	48.763	Pan_troglodytes
ENSHCOG00000003665	mrm1	78	48.057	ENSPANG00000022126	MRM1	76	48.057	Papio_anubis
ENSHCOG00000003665	mrm1	80	58.885	ENSPKIG00000007654	mrm1	78	58.885	Paramormyrops_kingsleyae
ENSHCOG00000003665	mrm1	76	48.029	ENSPSIG00000017622	MRM1	99	48.029	Pelodiscus_sinensis
ENSHCOG00000003665	mrm1	87	57.944	ENSPMGG00000003905	mrm1	95	57.944	Periophthalmus_magnuspinnatus
ENSHCOG00000003665	mrm1	57	38.813	ENSPMAG00000000484	mrm1	100	38.813	Petromyzon_marinus
ENSHCOG00000003665	mrm1	85	43.226	ENSPCIG00000003352	MRM1	77	43.226	Phascolarctos_cinereus
ENSHCOG00000003665	mrm1	90	56.386	ENSPFOG00000018234	mrm1	79	56.386	Poecilia_formosa
ENSHCOG00000003665	mrm1	90	61.371	ENSPLAG00000020759	mrm1	81	61.371	Poecilia_latipinna
ENSHCOG00000003665	mrm1	90	61.994	ENSPMEG00000021744	mrm1	81	61.994	Poecilia_mexicana
ENSHCOG00000003665	mrm1	90	61.538	ENSPREG00000013224	mrm1	87	61.538	Poecilia_reticulata
ENSHCOG00000003665	mrm1	82	37.793	ENSPCAG00000011756	MRM1	82	37.793	Procavia_capensis
ENSHCOG00000003665	mrm1	82	46.780	ENSPCOG00000020871	MRM1	85	46.780	Propithecus_coquereli
ENSHCOG00000003665	mrm1	76	40.000	ENSPVAG00000011626	MRM1	76	40.000	Pteropus_vampyrus
ENSHCOG00000003665	mrm1	78	68.953	ENSPNYG00000000528	mrm1	97	69.123	Pundamilia_nyererei
ENSHCOG00000003665	mrm1	93	52.601	ENSPNAG00000014551	mrm1	84	52.601	Pygocentrus_nattereri
ENSHCOG00000003665	mrm1	81	48.649	ENSRNOG00000027901	Mrm1	88	48.649	Rattus_norvegicus
ENSHCOG00000003665	mrm1	78	47.350	ENSRBIG00000040494	MRM1	76	47.350	Rhinopithecus_bieti
ENSHCOG00000003665	mrm1	78	47.350	ENSRROG00000041704	MRM1	77	47.350	Rhinopithecus_roxellana
ENSHCOG00000003665	mrm1	80	46.181	ENSSBOG00000024145	MRM1	79	46.181	Saimiri_boliviensis_boliviensis
ENSHCOG00000003665	mrm1	81	59.794	ENSSFOG00015022117	mrm1	74	59.794	Scleropages_formosus
ENSHCOG00000003665	mrm1	82	66.553	ENSSMAG00000009657	mrm1	97	66.102	Scophthalmus_maximus
ENSHCOG00000003665	mrm1	90	67.188	ENSSDUG00000009089	mrm1	82	67.188	Seriola_dumerili
ENSHCOG00000003665	mrm1	90	65.625	ENSSLDG00000024141	mrm1	92	65.625	Seriola_lalandi_dorsalis
ENSHCOG00000003665	mrm1	79	46.503	ENSSPUG00000000265	MRM1	73	46.503	Sphenodon_punctatus
ENSHCOG00000003665	mrm1	69	50.394	ENSSSCG00000017691	MRM1	75	47.917	Sus_scrofa
ENSHCOG00000003665	mrm1	53	54.124	ENSTGUG00000008048	MRM1	98	54.124	Taeniopygia_guttata
ENSHCOG00000003665	mrm1	92	61.027	ENSTRUG00000011737	mrm1	86	61.027	Takifugu_rubripes
ENSHCOG00000003665	mrm1	83	65.333	ENSTNIG00000010088	mrm1	82	65.333	Tetraodon_nigroviridis
ENSHCOG00000003665	mrm1	59	40.455	ENSTBEG00000007237	-	94	40.455	Tupaia_belangeri
ENSHCOG00000003665	mrm1	80	43.197	ENSTTRG00000011984	MRM1	78	43.493	Tursiops_truncatus
ENSHCOG00000003665	mrm1	82	58.120	ENSUAMG00000023152	MRM1	92	45.973	Ursus_americanus
ENSHCOG00000003665	mrm1	80	46.875	ENSVVUG00000018420	MRM1	67	46.875	Vulpes_vulpes
ENSHCOG00000003665	mrm1	90	59.875	ENSXCOG00000003622	mrm1	88	59.875	Xiphophorus_couchianus
ENSHCOG00000003665	mrm1	90	60.436	ENSXMAG00000014890	mrm1	87	60.436	Xiphophorus_maculatus