EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003687 (Gene tree)
Gene ID: 109530627
Gene Symbol: mrpl30
Alias: zgc:112089
Full Name: mitochondrial ribosomal protein L30
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2552 bases
Position: chrKV880396.1:554031-556582
Accession: 109530627
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002527	Ribosomal_L30	PF00327.20	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010258	-	1514	XM_019894487	ENSHCOP00000002527	157 (aa)	XP_019750046	UPI00094EB927

Gene Model

Click here to download ENSHCOG00000003687's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003687's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003687	mrpl30	96	71.875	ENSAPOG00000005884	mrpl30	100	71.875	Acanthochromis_polyacanthus
ENSHCOG00000003687	mrpl30	96	69.375	ENSACIG00000022360	mrpl30	100	69.375	Amphilophus_citrinellus
ENSHCOG00000003687	mrpl30	96	71.250	ENSAOCG00000002976	mrpl30	100	71.250	Amphiprion_ocellaris
ENSHCOG00000003687	mrpl30	96	71.250	ENSAPEG00000006678	mrpl30	100	71.250	Amphiprion_percula
ENSHCOG00000003687	mrpl30	94	73.377	ENSATEG00000008999	mrpl30	96	73.377	Anabas_testudineus
ENSHCOG00000003687	mrpl30	83	59.701	ENSACAG00000000933	-	93	59.701	Anolis_carolinensis
ENSHCOG00000003687	mrpl30	90	72.483	ENSACLG00000001506	mrpl30	93	72.483	Astatotilapia_calliptera
ENSHCOG00000003687	mrpl30	90	64.626	ENSAMXG00000005341	mrpl30	91	64.626	Astyanax_mexicanus
ENSHCOG00000003687	mrpl30	81	51.181	ENSCAFG00000008574	-	79	51.181	Canis_familiaris
ENSHCOG00000003687	mrpl30	69	60.000	ENSTSYG00000030746	-	81	60.000	Carlito_syrichta
ENSHCOG00000003687	mrpl30	52	50.617	ENSCAPG00000016402	-	86	50.617	Cavia_aperea
ENSHCOG00000003687	mrpl30	60	51.042	ENSCPBG00000013807	-	79	51.042	Chrysemys_picta_bellii
ENSHCOG00000003687	mrpl30	63	47.525	ENSCPBG00000005225	-	85	47.525	Chrysemys_picta_bellii
ENSHCOG00000003687	mrpl30	96	62.420	ENSCSEG00000004238	mrpl30	99	62.420	Cynoglossus_semilaevis
ENSHCOG00000003687	mrpl30	86	72.662	ENSCVAG00000018330	mrpl30	87	72.662	Cyprinodon_variegatus
ENSHCOG00000003687	mrpl30	92	63.699	ENSDARG00000069850	mrpl30	92	63.699	Danio_rerio
ENSHCOG00000003687	mrpl30	72	55.752	ENSEBUG00000013592	mrpl30	83	55.752	Eptatretus_burgeri
ENSHCOG00000003687	mrpl30	92	68.919	ENSELUG00000020222	mrpl30	94	68.919	Esox_lucius
ENSHCOG00000003687	mrpl30	89	51.079	ENSFALG00000003937	-	86	51.079	Ficedula_albicollis
ENSHCOG00000003687	mrpl30	93	70.270	ENSFHEG00000012666	mrpl30	79	70.270	Fundulus_heteroclitus
ENSHCOG00000003687	mrpl30	86	57.778	ENSGALG00000016760	-	98	52.866	Gallus_gallus
ENSHCOG00000003687	mrpl30	93	69.333	ENSGAFG00000021234	mrpl30	94	69.333	Gambusia_affinis
ENSHCOG00000003687	mrpl30	90	71.812	ENSHBUG00000005392	mrpl30	93	71.812	Haplochromis_burtoni
ENSHCOG00000003687	mrpl30	68	57.944	ENSHGLG00000019740	-	74	57.944	Heterocephalus_glaber_female
ENSHCOG00000003687	mrpl30	68	57.944	ENSHGLG00100019694	-	74	57.944	Heterocephalus_glaber_male
ENSHCOG00000003687	mrpl30	92	60.417	ENSIPUG00000004313	mrpl30	88	60.417	Ictalurus_punctatus
ENSHCOG00000003687	mrpl30	71	55.357	ENSSTOG00000033815	-	84	55.357	Ictidomys_tridecemlineatus
ENSHCOG00000003687	mrpl30	96	70.625	ENSKMAG00000001499	mrpl30	100	70.625	Kryptolebias_marmoratus
ENSHCOG00000003687	mrpl30	71	80.702	ENSLBEG00000027390	-	82	80.702	Labrus_bergylta
ENSHCOG00000003687	mrpl30	94	76.623	ENSLBEG00000018368	mrpl30	96	76.623	Labrus_bergylta
ENSHCOG00000003687	mrpl30	99	48.408	ENSLACG00000012777	mrpl30	97	48.408	Latimeria_chalumnae
ENSHCOG00000003687	mrpl30	100	54.217	ENSLOCG00000001452	mrpl30	96	58.170	Lepisosteus_oculatus
ENSHCOG00000003687	mrpl30	94	75.974	ENSMAMG00000016802	mrpl30	96	75.974	Mastacembelus_armatus
ENSHCOG00000003687	mrpl30	90	72.483	ENSMZEG00005022036	mrpl30	93	72.483	Maylandia_zebra
ENSHCOG00000003687	mrpl30	94	76.623	ENSMMOG00000019827	mrpl30	96	76.623	Mola_mola
ENSHCOG00000003687	mrpl30	96	72.785	ENSMALG00000004911	mrpl30	100	72.785	Monopterus_albus
ENSHCOG00000003687	mrpl30	90	70.470	ENSNBRG00000003924	mrpl30	93	70.470	Neolamprologus_brichardi
ENSHCOG00000003687	mrpl30	73	55.556	ENSMEUG00000010134	-	72	55.556	Notamacropus_eugenii
ENSHCOG00000003687	mrpl30	77	57.025	ENSODEG00000010546	-	92	57.025	Octodon_degus
ENSHCOG00000003687	mrpl30	90	73.154	ENSONIG00000014167	mrpl30	93	73.154	Oreochromis_niloticus
ENSHCOG00000003687	mrpl30	80	76.984	ENSORLG00000025091	mrpl30	70	76.984	Oryzias_latipes
ENSHCOG00000003687	mrpl30	99	66.667	ENSORLG00020011064	mrpl30	98	70.395	Oryzias_latipes_hni
ENSHCOG00000003687	mrpl30	80	77.778	ENSORLG00015014430	mrpl30	82	77.778	Oryzias_latipes_hsok
ENSHCOG00000003687	mrpl30	97	70.779	ENSOMEG00000011587	mrpl30	86	70.779	Oryzias_melastigma
ENSHCOG00000003687	mrpl30	81	60.465	ENSPKIG00000012379	mrpl30	81	60.465	Paramormyrops_kingsleyae
ENSHCOG00000003687	mrpl30	83	53.731	ENSPSIG00000011557	-	95	53.731	Pelodiscus_sinensis
ENSHCOG00000003687	mrpl30	94	58.491	ENSPMGG00000010475	mrpl30	100	58.491	Periophthalmus_magnuspinnatus
ENSHCOG00000003687	mrpl30	71	57.895	ENSPMAG00000004676	mrpl30	71	57.895	Petromyzon_marinus
ENSHCOG00000003687	mrpl30	93	67.333	ENSPFOG00000015775	mrpl30	94	67.333	Poecilia_formosa
ENSHCOG00000003687	mrpl30	93	67.333	ENSPLAG00000021371	mrpl30	94	67.333	Poecilia_latipinna
ENSHCOG00000003687	mrpl30	93	67.333	ENSPMEG00000006243	mrpl30	94	67.333	Poecilia_mexicana
ENSHCOG00000003687	mrpl30	93	66.667	ENSPREG00000008569	mrpl30	94	66.667	Poecilia_reticulata
ENSHCOG00000003687	mrpl30	57	60.000	ENSPCAG00000002174	-	71	60.000	Procavia_capensis
ENSHCOG00000003687	mrpl30	90	71.812	ENSPNYG00000014319	mrpl30	93	71.812	Pundamilia_nyererei
ENSHCOG00000003687	mrpl30	73	71.930	ENSPNAG00000009867	mrpl30	71	71.930	Pygocentrus_nattereri
ENSHCOG00000003687	mrpl30	81	61.240	ENSSFOG00015010917	mrpl30	80	61.240	Scleropages_formosus
ENSHCOG00000003687	mrpl30	94	70.588	ENSSMAG00000019930	mrpl30	96	70.588	Scophthalmus_maximus
ENSHCOG00000003687	mrpl30	94	74.510	ENSSDUG00000006705	mrpl30	96	74.510	Seriola_dumerili
ENSHCOG00000003687	mrpl30	94	74.510	ENSSLDG00000005509	mrpl30	96	74.510	Seriola_lalandi_dorsalis
ENSHCOG00000003687	mrpl30	98	54.375	ENSSPUG00000009351	-	99	54.375	Sphenodon_punctatus
ENSHCOG00000003687	mrpl30	96	42.675	ENSSPUG00000015069	-	96	43.791	Sphenodon_punctatus
ENSHCOG00000003687	mrpl30	90	73.826	ENSSPAG00000020142	mrpl30	93	73.826	Stegastes_partitus
ENSHCOG00000003687	mrpl30	73	55.263	ENSTGUG00000010133	-	97	55.263	Taeniopygia_guttata
ENSHCOG00000003687	mrpl30	92	70.199	ENSTRUG00000022654	mrpl30	95	70.199	Takifugu_rubripes
ENSHCOG00000003687	mrpl30	96	68.790	ENSTNIG00000013872	mrpl30	100	68.790	Tetraodon_nigroviridis
ENSHCOG00000003687	mrpl30	80	53.175	ENSVPAG00000011780	-	86	53.175	Vicugna_pacos
ENSHCOG00000003687	mrpl30	92	48.966	ENSVVUG00000010788	-	95	48.966	Vulpes_vulpes
ENSHCOG00000003687	mrpl30	94	50.625	ENSXETG00000026571	mrpl30	99	50.625	Xenopus_tropicalis
ENSHCOG00000003687	mrpl30	98	68.354	ENSXCOG00000018807	mrpl30	99	68.354	Xiphophorus_couchianus
ENSHCOG00000003687	mrpl30	93	70.000	ENSXMAG00000024725	mrpl30	94	70.000	Xiphophorus_maculatus