EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000003882 (Gene tree)
Gene ID: 109517050
Gene Symbol: nup35
Alias: fj68d11|wu:fj68d11|zgc:65979
Full Name: nucleoporin 35
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4164 bases
Position: chrKV879992.1:173885-178048
Accession: 109517050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000018937	Nup35_RRM	PF05172.13	7.5e-25	1	1
ENSHCOP00000018937	Nup35_RRM_2	PF14605.6	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009987	-	1340	XM_019871946	ENSHCOP00000018937	287 (aa)	XP_019727505	-

Gene Model

Click here to download ENSHCOG00000003882's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000003882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003882	nup35	99	58.861	ENSG00000163002	NUP35	100	66.667	Homo_sapiens
ENSHCOG00000003882	nup35	100	82.373	ENSAPOG00000003630	nup35	100	83.051	Acanthochromis_polyacanthus
ENSHCOG00000003882	nup35	99	58.282	ENSAMEG00000001191	NUP35	96	58.282	Ailuropoda_melanoleuca
ENSHCOG00000003882	nup35	79	83.621	ENSACIG00000023984	nup35	97	83.621	Amphilophus_citrinellus
ENSHCOG00000003882	nup35	100	82.373	ENSAOCG00000007484	nup35	100	83.051	Amphiprion_ocellaris
ENSHCOG00000003882	nup35	100	83.051	ENSAPEG00000020027	nup35	100	84.068	Amphiprion_percula
ENSHCOG00000003882	nup35	100	82.993	ENSATEG00000019305	nup35	100	82.993	Anabas_testudineus
ENSHCOG00000003882	nup35	99	59.062	ENSAPLG00000009161	NUP35	97	59.062	Anas_platyrhynchos
ENSHCOG00000003882	nup35	99	58.750	ENSACAG00000008692	NUP35	96	58.750	Anolis_carolinensis
ENSHCOG00000003882	nup35	99	58.861	ENSANAG00000021090	NUP35	96	58.861	Aotus_nancymaae
ENSHCOG00000003882	nup35	100	82.432	ENSACLG00000013918	nup35	100	82.432	Astatotilapia_calliptera
ENSHCOG00000003882	nup35	99	63.226	ENSAMXG00000003371	nup35	100	63.279	Astyanax_mexicanus
ENSHCOG00000003882	nup35	99	58.991	ENSBTAG00000009777	NUP35	96	58.991	Bos_taurus
ENSHCOG00000003882	nup35	99	58.861	ENSCJAG00000011104	NUP35	96	58.861	Callithrix_jacchus
ENSHCOG00000003882	nup35	97	57.643	ENSCAFG00000031849	NUP35	100	57.643	Canis_familiaris
ENSHCOG00000003882	nup35	98	58.176	ENSCAFG00020008408	NUP35	96	58.176	Canis_lupus_dingo
ENSHCOG00000003882	nup35	97	58.746	ENSCHIG00000023148	NUP35	100	58.746	Capra_hircus
ENSHCOG00000003882	nup35	99	57.729	ENSTSYG00000002117	NUP35	96	57.729	Carlito_syrichta
ENSHCOG00000003882	nup35	98	48.297	ENSCAPG00000005703	NUP35	97	48.923	Cavia_aperea
ENSHCOG00000003882	nup35	99	58.385	ENSCPOG00000011906	NUP35	97	59.006	Cavia_porcellus
ENSHCOG00000003882	nup35	99	58.861	ENSCCAG00000025009	NUP35	91	64.088	Cebus_capucinus
ENSHCOG00000003882	nup35	99	53.618	ENSCATG00000033109	NUP35	96	53.618	Cercocebus_atys
ENSHCOG00000003882	nup35	99	58.696	ENSCLAG00000012559	NUP35	96	58.696	Chinchilla_lanigera
ENSHCOG00000003882	nup35	99	58.544	ENSCSAG00000012620	NUP35	96	58.544	Chlorocebus_sabaeus
ENSHCOG00000003882	nup35	100	59.006	ENSCPBG00000001303	NUP35	98	59.627	Chrysemys_picta_bellii
ENSHCOG00000003882	nup35	97	42.006	ENSCING00000009659	-	97	42.006	Ciona_intestinalis
ENSHCOG00000003882	nup35	98	41.018	ENSCSAVG00000007467	-	99	41.018	Ciona_savignyi
ENSHCOG00000003882	nup35	99	58.544	ENSCANG00000030785	NUP35	100	58.199	Colobus_angolensis_palliatus
ENSHCOG00000003882	nup35	99	58.621	ENSCGRG00001018638	-	96	58.805	Cricetulus_griseus_chok1gshd
ENSHCOG00000003882	nup35	99	58.621	ENSCGRG00000011313	-	96	58.805	Cricetulus_griseus_crigri
ENSHCOG00000003882	nup35	100	78.523	ENSCSEG00000000938	nup35	100	78.523	Cynoglossus_semilaevis
ENSHCOG00000003882	nup35	100	80.612	ENSCVAG00000001792	nup35	100	80.952	Cyprinodon_variegatus
ENSHCOG00000003882	nup35	100	63.462	ENSDARG00000012222	nup35	100	63.696	Danio_rerio
ENSHCOG00000003882	nup35	99	58.360	ENSDNOG00000009513	-	85	58.360	Dasypus_novemcinctus
ENSHCOG00000003882	nup35	99	57.729	ENSDNOG00000038754	-	96	57.729	Dasypus_novemcinctus
ENSHCOG00000003882	nup35	99	58.567	ENSDORG00000010458	-	97	58.750	Dipodomys_ordii
ENSHCOG00000003882	nup35	98	59.306	ENSETEG00000005896	NUP35	100	59.306	Echinops_telfairi
ENSHCOG00000003882	nup35	98	54.012	ENSEBUG00000013034	nup35	99	54.012	Eptatretus_burgeri
ENSHCOG00000003882	nup35	99	58.360	ENSEASG00005022100	NUP35	96	58.360	Equus_asinus_asinus
ENSHCOG00000003882	nup35	99	57.994	ENSECAG00000003968	NUP35	100	58.013	Equus_caballus
ENSHCOG00000003882	nup35	99	51.724	ENSEEUG00000008469	NUP35	97	51.724	Erinaceus_europaeus
ENSHCOG00000003882	nup35	100	63.722	ENSELUG00000013693	nup35	100	63.722	Esox_lucius
ENSHCOG00000003882	nup35	99	57.367	ENSFCAG00000025636	NUP35	100	57.006	Felis_catus
ENSHCOG00000003882	nup35	100	59.190	ENSFALG00000013175	NUP35	98	59.190	Ficedula_albicollis
ENSHCOG00000003882	nup35	99	58.514	ENSFDAG00000017998	NUP35	96	58.514	Fukomys_damarensis
ENSHCOG00000003882	nup35	100	82.594	ENSFHEG00000010229	nup35	100	83.276	Fundulus_heteroclitus
ENSHCOG00000003882	nup35	78	66.525	ENSGMOG00000003337	nup35	100	66.525	Gadus_morhua
ENSHCOG00000003882	nup35	98	58.228	ENSGALG00000002689	NUP35	97	58.228	Gallus_gallus
ENSHCOG00000003882	nup35	100	81.081	ENSGAFG00000022048	nup35	100	82.770	Gambusia_affinis
ENSHCOG00000003882	nup35	100	83.904	ENSGACG00000008203	nup35	100	83.505	Gasterosteus_aculeatus
ENSHCOG00000003882	nup35	97	59.425	ENSGAGG00000001967	NUP35	100	59.425	Gopherus_agassizii
ENSHCOG00000003882	nup35	99	58.861	ENSGGOG00000009919	NUP35	93	61.929	Gorilla_gorilla
ENSHCOG00000003882	nup35	98	45.806	ENSHGLG00000000414	-	97	45.806	Heterocephalus_glaber_female
ENSHCOG00000003882	nup35	99	58.951	ENSHGLG00000013230	NUP35	96	58.951	Heterocephalus_glaber_female
ENSHCOG00000003882	nup35	92	52.901	ENSHGLG00000008616	-	90	53.242	Heterocephalus_glaber_female
ENSHCOG00000003882	nup35	92	52.901	ENSHGLG00100000091	-	91	53.242	Heterocephalus_glaber_male
ENSHCOG00000003882	nup35	98	45.806	ENSHGLG00100010869	-	97	45.806	Heterocephalus_glaber_male
ENSHCOG00000003882	nup35	99	58.951	ENSHGLG00100012840	NUP35	96	58.951	Heterocephalus_glaber_male
ENSHCOG00000003882	nup35	100	62.179	ENSIPUG00000002798	nup35	100	62.179	Ictalurus_punctatus
ENSHCOG00000003882	nup35	99	58.438	ENSSTOG00000000711	NUP35	96	58.438	Ictidomys_tridecemlineatus
ENSHCOG00000003882	nup35	99	59.810	ENSJJAG00000016432	-	97	60.000	Jaculus_jaculus
ENSHCOG00000003882	nup35	98	53.822	ENSJJAG00000017434	-	96	53.822	Jaculus_jaculus
ENSHCOG00000003882	nup35	86	54.448	ENSJJAG00000006387	-	93	54.448	Jaculus_jaculus
ENSHCOG00000003882	nup35	100	57.616	ENSJJAG00000007003	-	97	57.616	Jaculus_jaculus
ENSHCOG00000003882	nup35	100	77.441	ENSKMAG00000011162	nup35	100	78.451	Kryptolebias_marmoratus
ENSHCOG00000003882	nup35	99	65.278	ENSLBEG00000012416	nup35	99	65.278	Labrus_bergylta
ENSHCOG00000003882	nup35	97	59.295	ENSLACG00000008247	NUP35	100	59.295	Latimeria_chalumnae
ENSHCOG00000003882	nup35	100	62.229	ENSLOCG00000006726	nup35	100	62.229	Lepisosteus_oculatus
ENSHCOG00000003882	nup35	99	58.307	ENSLAFG00000008155	NUP35	96	58.307	Loxodonta_africana
ENSHCOG00000003882	nup35	99	58.228	ENSMFAG00000000834	NUP35	100	57.878	Macaca_fascicularis
ENSHCOG00000003882	nup35	99	58.544	ENSMMUG00000004140	NUP35	99	58.599	Macaca_mulatta
ENSHCOG00000003882	nup35	99	58.544	ENSMNEG00000029014	NUP35	96	58.544	Macaca_nemestrina
ENSHCOG00000003882	nup35	99	58.544	ENSMLEG00000035422	NUP35	100	58.199	Mandrillus_leucophaeus
ENSHCOG00000003882	nup35	100	83.737	ENSMAMG00000013232	nup35	100	83.737	Mastacembelus_armatus
ENSHCOG00000003882	nup35	99	81.229	ENSMZEG00005020619	nup35	98	81.618	Maylandia_zebra
ENSHCOG00000003882	nup35	97	57.372	ENSMGAG00000004412	NUP35	95	58.013	Meleagris_gallopavo
ENSHCOG00000003882	nup35	99	58.730	ENSMAUG00000013776	-	96	58.730	Mesocricetus_auratus
ENSHCOG00000003882	nup35	99	58.044	ENSMICG00000006790	NUP35	100	58.333	Microcebus_murinus
ENSHCOG00000003882	nup35	99	59.048	ENSMOCG00000014754	-	96	59.048	Microtus_ochrogaster
ENSHCOG00000003882	nup35	100	79.310	ENSMMOG00000005026	nup35	100	79.310	Mola_mola
ENSHCOG00000003882	nup35	99	60.312	ENSMODG00000010578	NUP35	96	60.312	Monodelphis_domestica
ENSHCOG00000003882	nup35	100	85.121	ENSMALG00000020187	nup35	100	85.121	Monopterus_albus
ENSHCOG00000003882	nup35	99	58.413	MGP_CAROLIEiJ_G0023709	-	96	58.413	Mus_caroli
ENSHCOG00000003882	nup35	99	58.413	ENSMUSG00000026999	Nup35	96	58.413	Mus_musculus
ENSHCOG00000003882	nup35	99	58.413	MGP_PahariEiJ_G0025160	-	96	58.413	Mus_pahari
ENSHCOG00000003882	nup35	84	49.673	MGP_SPRETEiJ_G0033063	-	100	49.673	Mus_spretus
ENSHCOG00000003882	nup35	99	57.994	ENSMPUG00000002063	NUP35	96	57.994	Mustela_putorius_furo
ENSHCOG00000003882	nup35	99	58.934	ENSMLUG00000013154	NUP35	96	58.934	Myotis_lucifugus
ENSHCOG00000003882	nup35	99	57.962	ENSNGAG00000012107	-	96	57.962	Nannospalax_galili
ENSHCOG00000003882	nup35	100	81.229	ENSNBRG00000020466	nup35	98	81.911	Neolamprologus_brichardi
ENSHCOG00000003882	nup35	99	58.861	ENSNLEG00000035026	NUP35	100	58.521	Nomascus_leucogenys
ENSHCOG00000003882	nup35	58	45.304	ENSMEUG00000003001	-	55	45.304	Notamacropus_eugenii
ENSHCOG00000003882	nup35	78	58.203	ENSOPRG00000016609	NUP35	78	58.203	Ochotona_princeps
ENSHCOG00000003882	nup35	99	58.951	ENSODEG00000011202	-	97	58.589	Octodon_degus
ENSHCOG00000003882	nup35	98	42.812	ENSODEG00000000280	-	95	42.812	Octodon_degus
ENSHCOG00000003882	nup35	100	81.605	ENSONIG00000016251	nup35	100	81.605	Oreochromis_niloticus
ENSHCOG00000003882	nup35	75	63.136	ENSOANG00000006793	-	97	63.136	Ornithorhynchus_anatinus
ENSHCOG00000003882	nup35	99	59.177	ENSOCUG00000014407	NUP35	96	59.177	Oryctolagus_cuniculus
ENSHCOG00000003882	nup35	100	79.461	ENSORLG00000013588	nup35	100	79.461	Oryzias_latipes
ENSHCOG00000003882	nup35	100	79.461	ENSORLG00020008201	nup35	100	79.461	Oryzias_latipes_hni
ENSHCOG00000003882	nup35	100	79.125	ENSORLG00015011096	nup35	100	79.125	Oryzias_latipes_hsok
ENSHCOG00000003882	nup35	100	78.788	ENSOMEG00000007628	nup35	100	78.788	Oryzias_melastigma
ENSHCOG00000003882	nup35	99	57.143	ENSOGAG00000011920	NUP35	96	57.764	Otolemur_garnettii
ENSHCOG00000003882	nup35	99	59.306	ENSOARG00000016728	NUP35	96	59.306	Ovis_aries
ENSHCOG00000003882	nup35	99	58.861	ENSPPAG00000036316	NUP35	100	58.521	Pan_paniscus
ENSHCOG00000003882	nup35	99	57.680	ENSPPRG00000024726	NUP35	100	57.325	Panthera_pardus
ENSHCOG00000003882	nup35	99	57.680	ENSPTIG00000017299	NUP35	96	57.680	Panthera_tigris_altaica
ENSHCOG00000003882	nup35	99	58.861	ENSPTRG00000012711	NUP35	100	58.521	Pan_troglodytes
ENSHCOG00000003882	nup35	99	58.544	ENSPANG00000013686	NUP35	96	58.544	Papio_anubis
ENSHCOG00000003882	nup35	100	63.043	ENSPKIG00000022051	nup35	100	63.975	Paramormyrops_kingsleyae
ENSHCOG00000003882	nup35	97	58.974	ENSPSIG00000002146	NUP35	100	58.974	Pelodiscus_sinensis
ENSHCOG00000003882	nup35	97	71.525	ENSPMGG00000022915	nup35	97	71.525	Periophthalmus_magnuspinnatus
ENSHCOG00000003882	nup35	99	58.730	ENSPEMG00000014718	-	96	58.730	Peromyscus_maniculatus_bairdii
ENSHCOG00000003882	nup35	99	52.795	ENSPMAG00000006604	nup35	98	52.795	Petromyzon_marinus
ENSHCOG00000003882	nup35	99	60.248	ENSPCIG00000015482	NUP35	96	60.248	Phascolarctos_cinereus
ENSHCOG00000003882	nup35	100	81.419	ENSPFOG00000010020	nup35	100	83.108	Poecilia_formosa
ENSHCOG00000003882	nup35	100	81.081	ENSPLAG00000005867	nup35	100	82.770	Poecilia_latipinna
ENSHCOG00000003882	nup35	100	82.131	ENSPMEG00000010552	nup35	100	83.108	Poecilia_mexicana
ENSHCOG00000003882	nup35	100	81.100	ENSPREG00000021005	nup35	100	81.787	Poecilia_reticulata
ENSHCOG00000003882	nup35	98	59.048	ENSPPYG00000012998	-	77	59.048	Pongo_abelii
ENSHCOG00000003882	nup35	98	43.354	ENSPCAG00000000605	NUP35	96	43.354	Procavia_capensis
ENSHCOG00000003882	nup35	99	58.360	ENSPCOG00000024097	NUP35	96	58.991	Propithecus_coquereli
ENSHCOG00000003882	nup35	99	59.317	ENSPVAG00000015908	NUP35	96	59.317	Pteropus_vampyrus
ENSHCOG00000003882	nup35	99	82.759	ENSPNYG00000012486	nup35	96	82.759	Pundamilia_nyererei
ENSHCOG00000003882	nup35	99	65.372	ENSPNAG00000005181	nup35	98	65.372	Pygocentrus_nattereri
ENSHCOG00000003882	nup35	99	58.413	ENSRNOG00000009290	Nup35	96	58.413	Rattus_norvegicus
ENSHCOG00000003882	nup35	99	58.544	ENSRBIG00000039427	NUP35	100	58.199	Rhinopithecus_bieti
ENSHCOG00000003882	nup35	99	58.544	ENSRROG00000026525	NUP35	96	61.929	Rhinopithecus_roxellana
ENSHCOG00000003882	nup35	99	58.567	ENSSBOG00000018676	NUP35	94	63.102	Saimiri_boliviensis_boliviensis
ENSHCOG00000003882	nup35	99	59.006	ENSSHAG00000009746	NUP35	96	59.006	Sarcophilus_harrisii
ENSHCOG00000003882	nup35	100	63.376	ENSSFOG00015002390	nup35	100	63.376	Scleropages_formosus
ENSHCOG00000003882	nup35	100	83.562	ENSSMAG00000015651	nup35	100	83.562	Scophthalmus_maximus
ENSHCOG00000003882	nup35	100	82.253	ENSSDUG00000013118	nup35	100	82.935	Seriola_dumerili
ENSHCOG00000003882	nup35	99	81.661	ENSSLDG00000018249	nup35	98	82.353	Seriola_lalandi_dorsalis
ENSHCOG00000003882	nup35	98	45.886	ENSSARG00000001535	-	100	45.886	Sorex_araneus
ENSHCOG00000003882	nup35	99	58.333	ENSSPUG00000018651	NUP35	97	58.333	Sphenodon_punctatus
ENSHCOG00000003882	nup35	100	83.051	ENSSPAG00000018264	nup35	100	83.390	Stegastes_partitus
ENSHCOG00000003882	nup35	99	58.934	ENSSSCG00000028949	NUP35	96	58.934	Sus_scrofa
ENSHCOG00000003882	nup35	99	57.680	ENSTGUG00000011278	NUP35	98	57.680	Taeniopygia_guttata
ENSHCOG00000003882	nup35	93	71.324	ENSTRUG00000014111	nup35	100	71.324	Takifugu_rubripes
ENSHCOG00000003882	nup35	99	65.614	ENSTNIG00000011568	nup35	95	65.614	Tetraodon_nigroviridis
ENSHCOG00000003882	nup35	99	55.172	ENSTBEG00000003328	NUP35	96	55.172	Tupaia_belangeri
ENSHCOG00000003882	nup35	99	52.632	ENSTTRG00000002512	NUP35	96	52.632	Tursiops_truncatus
ENSHCOG00000003882	nup35	58	63.388	ENSUAMG00000018696	-	88	63.388	Ursus_americanus
ENSHCOG00000003882	nup35	90	56.229	ENSUMAG00000017104	NUP35	96	56.229	Ursus_maritimus
ENSHCOG00000003882	nup35	99	58.991	ENSVPAG00000011898	NUP35	96	58.991	Vicugna_pacos
ENSHCOG00000003882	nup35	97	57.325	ENSVVUG00000016832	NUP35	100	57.325	Vulpes_vulpes
ENSHCOG00000003882	nup35	98	53.774	ENSXETG00000001335	nup35	98	51.682	Xenopus_tropicalis
ENSHCOG00000003882	nup35	100	81.419	ENSXMAG00000000409	nup35	100	83.108	Xiphophorus_maculatus