EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Description

Ensembl ID: ENSHCOG00000003893 (Gene tree)
Gene ID: 109524247
Gene Symbol: nxt2
Alias: zgc:153074
Full Name: nuclear transport factor 2 like export factor 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5422 bases
Position: chrKV880218.1:5840302-5845723
Accession: 109524247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002691	NTF2	PF02136.20	8.8e-26	1	1
ENSHCOP00000018938	NTF2	PF02136.20	9.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009998	-	429	-	ENSHCOP00000002691	142 (aa)	-	-
ENSHCOT00000009988	-	2060	XM_019883957	ENSHCOP00000018938	143 (aa)	XP_019739516	UPI00094EAE68

Gene Model

Click here to download ENSHCOG00000003893's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG
hcq03013	RNA transport	KEGG
hcq03015	mRNA surveillance pathway	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000003893	nxt2	100	76.224	ENSG00000101888	NXT2	99	79.130	Homo_sapiens
ENSHCOG00000003893	nxt2	100	94.406	ENSAPOG00000010308	nxt2	100	94.406	Acanthochromis_polyacanthus
ENSHCOG00000003893	nxt2	99	74.126	ENSAMEG00000017999	NXT2	72	74.126	Ailuropoda_melanoleuca
ENSHCOG00000003893	nxt2	100	94.406	ENSACIG00000015026	nxt2	100	94.406	Amphilophus_citrinellus
ENSHCOG00000003893	nxt2	100	93.706	ENSAOCG00000007411	nxt2	100	93.706	Amphiprion_ocellaris
ENSHCOG00000003893	nxt2	100	93.706	ENSAPEG00000010454	nxt2	100	93.706	Amphiprion_percula
ENSHCOG00000003893	nxt2	100	95.105	ENSATEG00000020315	nxt2	100	95.105	Anabas_testudineus
ENSHCOG00000003893	nxt2	100	68.750	ENSACAG00000012649	NXT2	98	68.750	Anolis_carolinensis
ENSHCOG00000003893	nxt2	100	74.126	ENSANAG00000038165	NXT2	99	73.944	Aotus_nancymaae
ENSHCOG00000003893	nxt2	100	93.007	ENSACLG00000025072	nxt2	100	93.007	Astatotilapia_calliptera
ENSHCOG00000003893	nxt2	100	86.713	ENSAMXG00000031355	nxt2	100	86.713	Astyanax_mexicanus
ENSHCOG00000003893	nxt2	99	72.340	ENSBTAG00000020739	NXT2	98	72.340	Bos_taurus
ENSHCOG00000003893	nxt2	100	75.524	ENSCJAG00000007369	NXT2	71	75.524	Callithrix_jacchus
ENSHCOG00000003893	nxt2	100	73.427	ENSCAFG00000028574	NXT2	71	73.427	Canis_familiaris
ENSHCOG00000003893	nxt2	100	73.427	ENSCAFG00020005721	NXT2	99	73.427	Canis_lupus_dingo
ENSHCOG00000003893	nxt2	99	72.340	ENSCHIG00000000279	NXT2	98	72.340	Capra_hircus
ENSHCOG00000003893	nxt2	100	74.126	ENSTSYG00000001924	NXT2	99	74.126	Carlito_syrichta
ENSHCOG00000003893	nxt2	80	76.991	ENSCPOG00000035559	-	97	76.991	Cavia_porcellus
ENSHCOG00000003893	nxt2	100	74.825	ENSCCAG00000035523	NXT2	71	74.825	Cebus_capucinus
ENSHCOG00000003893	nxt2	100	74.825	ENSCATG00000037402	NXT2	72	74.825	Cercocebus_atys
ENSHCOG00000003893	nxt2	99	72.340	ENSCLAG00000001175	NXT2	71	72.340	Chinchilla_lanigera
ENSHCOG00000003893	nxt2	100	75.524	ENSCSAG00000008842	NXT2	72	75.524	Chlorocebus_sabaeus
ENSHCOG00000003893	nxt2	100	74.126	ENSCPBG00000000629	NXT2	100	74.126	Chrysemys_picta_bellii
ENSHCOG00000003893	nxt2	100	74.126	ENSCANG00000041728	NXT2	72	74.126	Colobus_angolensis_palliatus
ENSHCOG00000003893	nxt2	99	70.213	ENSCGRG00001021749	Nxt2	72	70.213	Cricetulus_griseus_chok1gshd
ENSHCOG00000003893	nxt2	75	69.811	ENSCGRG00000001378	-	96	69.811	Cricetulus_griseus_crigri
ENSHCOG00000003893	nxt2	100	93.007	ENSCSEG00000018710	nxt2	100	93.007	Cynoglossus_semilaevis
ENSHCOG00000003893	nxt2	100	90.210	ENSCVAG00000021187	nxt2	100	90.210	Cyprinodon_variegatus
ENSHCOG00000003893	nxt2	99	85.816	ENSDARG00000061527	nxt2	100	85.401	Danio_rerio
ENSHCOG00000003893	nxt2	96	48.175	ENSDNOG00000043813	-	93	48.175	Dasypus_novemcinctus
ENSHCOG00000003893	nxt2	100	72.727	ENSDNOG00000039271	NXT2	99	72.727	Dasypus_novemcinctus
ENSHCOG00000003893	nxt2	97	69.784	ENSDORG00000010714	Nxt2	99	69.784	Dipodomys_ordii
ENSHCOG00000003893	nxt2	99	67.143	ENSDORG00000013227	-	99	67.143	Dipodomys_ordii
ENSHCOG00000003893	nxt2	98	67.626	ENSETEG00000008002	NXT2	70	67.626	Echinops_telfairi
ENSHCOG00000003893	nxt2	100	73.427	ENSEASG00005019567	NXT2	99	76.522	Equus_asinus_asinus
ENSHCOG00000003893	nxt2	100	74.126	ENSECAG00000015022	NXT2	72	74.126	Equus_caballus
ENSHCOG00000003893	nxt2	76	76.852	ENSEEUG00000006109	-	64	76.852	Erinaceus_europaeus
ENSHCOG00000003893	nxt2	96	69.853	ENSEEUG00000005675	-	98	69.853	Erinaceus_europaeus
ENSHCOG00000003893	nxt2	100	82.517	ENSELUG00000005141	NXT2	100	82.517	Esox_lucius
ENSHCOG00000003893	nxt2	100	74.126	ENSFCAG00000035855	NXT2	71	74.126	Felis_catus
ENSHCOG00000003893	nxt2	100	74.126	ENSFALG00000000178	NXT2	100	74.126	Ficedula_albicollis
ENSHCOG00000003893	nxt2	99	70.213	ENSFDAG00000011646	NXT2	70	70.213	Fukomys_damarensis
ENSHCOG00000003893	nxt2	100	91.608	ENSFHEG00000001982	nxt2	100	91.608	Fundulus_heteroclitus
ENSHCOG00000003893	nxt2	100	84.828	ENSGMOG00000003163	nxt2	100	84.828	Gadus_morhua
ENSHCOG00000003893	nxt2	99	75.887	ENSGALG00000008092	NXT2	99	75.887	Gallus_gallus
ENSHCOG00000003893	nxt2	100	90.210	ENSGAFG00000002714	nxt2	100	90.210	Gambusia_affinis
ENSHCOG00000003893	nxt2	100	90.345	ENSGACG00000018508	nxt2	100	90.345	Gasterosteus_aculeatus
ENSHCOG00000003893	nxt2	100	72.727	ENSGAGG00000017047	NXT2	100	72.727	Gopherus_agassizii
ENSHCOG00000003893	nxt2	100	76.923	ENSGGOG00000013593	NXT2	99	75.887	Gorilla_gorilla
ENSHCOG00000003893	nxt2	100	93.007	ENSHBUG00000002974	nxt2	100	93.007	Haplochromis_burtoni
ENSHCOG00000003893	nxt2	99	71.631	ENSHGLG00000001921	NXT2	97	76.106	Heterocephalus_glaber_female
ENSHCOG00000003893	nxt2	98	70.000	ENSHGLG00100002378	NXT2	96	74.107	Heterocephalus_glaber_male
ENSHCOG00000003893	nxt2	100	88.811	ENSIPUG00000000517	nxt2	100	88.811	Ictalurus_punctatus
ENSHCOG00000003893	nxt2	99	72.857	ENSSTOG00000005243	NXT2	97	72.857	Ictidomys_tridecemlineatus
ENSHCOG00000003893	nxt2	97	60.870	ENSJJAG00000023288	-	96	60.870	Jaculus_jaculus
ENSHCOG00000003893	nxt2	98	64.286	ENSJJAG00000000326	-	100	64.286	Jaculus_jaculus
ENSHCOG00000003893	nxt2	100	90.909	ENSKMAG00000016615	nxt2	100	90.909	Kryptolebias_marmoratus
ENSHCOG00000003893	nxt2	99	92.908	ENSLBEG00000014298	nxt2	99	92.908	Labrus_bergylta
ENSHCOG00000003893	nxt2	98	76.259	ENSLACG00000004286	NXT2	97	76.259	Latimeria_chalumnae
ENSHCOG00000003893	nxt2	100	85.315	ENSLOCG00000014519	nxt2	100	85.315	Lepisosteus_oculatus
ENSHCOG00000003893	nxt2	99	73.759	ENSLAFG00000007116	NXT2	84	73.759	Loxodonta_africana
ENSHCOG00000003893	nxt2	100	74.825	ENSMFAG00000004105	NXT2	72	74.825	Macaca_fascicularis
ENSHCOG00000003893	nxt2	100	74.825	ENSMMUG00000013204	NXT2	99	74.126	Macaca_mulatta
ENSHCOG00000003893	nxt2	100	74.825	ENSMNEG00000010392	NXT2	99	78.261	Macaca_nemestrina
ENSHCOG00000003893	nxt2	100	74.825	ENSMLEG00000041108	NXT2	72	74.825	Mandrillus_leucophaeus
ENSHCOG00000003893	nxt2	99	91.549	ENSMAMG00000013603	nxt2	92	91.549	Mastacembelus_armatus
ENSHCOG00000003893	nxt2	100	93.007	ENSMZEG00005007590	nxt2	100	93.007	Maylandia_zebra
ENSHCOG00000003893	nxt2	98	75.540	ENSMGAG00000006597	NXT2	98	75.540	Meleagris_gallopavo
ENSHCOG00000003893	nxt2	99	68.085	ENSMAUG00000000496	Nxt2	98	68.085	Mesocricetus_auratus
ENSHCOG00000003893	nxt2	98	71.942	ENSMICG00000017900	-	97	72.662	Microcebus_murinus
ENSHCOG00000003893	nxt2	99	73.759	ENSMICG00000014511	-	70	73.759	Microcebus_murinus
ENSHCOG00000003893	nxt2	99	63.121	ENSMICG00000014848	-	89	62.676	Microcebus_murinus
ENSHCOG00000003893	nxt2	100	65.035	ENSMOCG00000007176	Nxt2	99	65.035	Microtus_ochrogaster
ENSHCOG00000003893	nxt2	100	83.217	ENSMMOG00000009472	nxt2	100	83.217	Mola_mola
ENSHCOG00000003893	nxt2	100	69.231	ENSMODG00000011492	-	99	69.231	Monodelphis_domestica
ENSHCOG00000003893	nxt2	97	74.638	ENSMODG00000021343	-	100	74.101	Monodelphis_domestica
ENSHCOG00000003893	nxt2	100	93.706	ENSMALG00000006390	nxt2	100	93.706	Monopterus_albus
ENSHCOG00000003893	nxt2	100	70.629	MGP_CAROLIEiJ_G0033463	Nxt2	99	73.913	Mus_caroli
ENSHCOG00000003893	nxt2	100	70.629	ENSMUSG00000042271	Nxt2	99	73.913	Mus_musculus
ENSHCOG00000003893	nxt2	99	71.631	MGP_PahariEiJ_G0032003	Nxt2	97	74.336	Mus_pahari
ENSHCOG00000003893	nxt2	100	70.629	MGP_SPRETEiJ_G0034634	Nxt2	99	73.913	Mus_spretus
ENSHCOG00000003893	nxt2	100	74.126	ENSMPUG00000003973	NXT2	71	74.126	Mustela_putorius_furo
ENSHCOG00000003893	nxt2	99	74.468	ENSMLUG00000000631	NXT2	71	74.468	Myotis_lucifugus
ENSHCOG00000003893	nxt2	99	69.504	ENSNGAG00000015935	Nxt2	98	69.504	Nannospalax_galili
ENSHCOG00000003893	nxt2	100	93.706	ENSNBRG00000019401	nxt2	100	93.706	Neolamprologus_brichardi
ENSHCOG00000003893	nxt2	100	75.524	ENSNLEG00000014331	NXT2	99	74.126	Nomascus_leucogenys
ENSHCOG00000003893	nxt2	97	73.913	ENSMEUG00000000393	-	100	73.913	Notamacropus_eugenii
ENSHCOG00000003893	nxt2	98	72.857	ENSMEUG00000001278	-	99	72.857	Notamacropus_eugenii
ENSHCOG00000003893	nxt2	100	70.629	ENSODEG00000012049	NXT2	99	71.429	Octodon_degus
ENSHCOG00000003893	nxt2	100	93.706	ENSONIG00000017566	nxt2	100	93.706	Oreochromis_niloticus
ENSHCOG00000003893	nxt2	100	74.126	ENSOANG00000011441	NXT2	93	74.126	Ornithorhynchus_anatinus
ENSHCOG00000003893	nxt2	100	72.727	ENSOCUG00000008261	NXT2	72	72.727	Oryctolagus_cuniculus
ENSHCOG00000003893	nxt2	100	90.210	ENSORLG00000022600	nxt2	100	90.210	Oryzias_latipes
ENSHCOG00000003893	nxt2	100	90.210	ENSORLG00020004703	nxt2	100	90.210	Oryzias_latipes_hni
ENSHCOG00000003893	nxt2	100	90.210	ENSORLG00015008149	nxt2	100	90.210	Oryzias_latipes_hsok
ENSHCOG00000003893	nxt2	99	92.908	ENSOMEG00000013420	nxt2	100	91.608	Oryzias_melastigma
ENSHCOG00000003893	nxt2	100	74.126	ENSOGAG00000007890	-	70	74.126	Otolemur_garnettii
ENSHCOG00000003893	nxt2	99	72.340	ENSOARG00000015625	-	86	72.340	Ovis_aries
ENSHCOG00000003893	nxt2	99	71.631	ENSOARG00000018009	-	71	71.631	Ovis_aries
ENSHCOG00000003893	nxt2	99	72.340	ENSOARG00000018574	-	86	72.340	Ovis_aries
ENSHCOG00000003893	nxt2	100	76.224	ENSPPAG00000030159	NXT2	99	75.887	Pan_paniscus
ENSHCOG00000003893	nxt2	100	73.427	ENSPPRG00000024610	NXT2	99	73.427	Panthera_pardus
ENSHCOG00000003893	nxt2	97	67.808	ENSPTIG00000013174	NXT2	99	67.808	Panthera_tigris_altaica
ENSHCOG00000003893	nxt2	100	76.224	ENSPTRG00000039310	NXT2	99	75.887	Pan_troglodytes
ENSHCOG00000003893	nxt2	100	74.825	ENSPANG00000018449	NXT2	99	74.825	Papio_anubis
ENSHCOG00000003893	nxt2	100	88.112	ENSPKIG00000022011	nxt2	100	88.112	Paramormyrops_kingsleyae
ENSHCOG00000003893	nxt2	100	74.126	ENSPSIG00000006737	NXT2	73	74.126	Pelodiscus_sinensis
ENSHCOG00000003893	nxt2	100	88.112	ENSPMGG00000000629	nxt2	100	88.112	Periophthalmus_magnuspinnatus
ENSHCOG00000003893	nxt2	98	72.662	ENSPCIG00000008562	-	89	72.662	Phascolarctos_cinereus
ENSHCOG00000003893	nxt2	100	92.308	ENSPFOG00000007462	nxt2	100	92.308	Poecilia_formosa
ENSHCOG00000003893	nxt2	100	92.308	ENSPLAG00000002080	nxt2	100	92.308	Poecilia_latipinna
ENSHCOG00000003893	nxt2	100	92.308	ENSPMEG00000008382	nxt2	100	92.308	Poecilia_mexicana
ENSHCOG00000003893	nxt2	100	74.825	ENSPPYG00000020625	-	99	74.825	Pongo_abelii
ENSHCOG00000003893	nxt2	99	66.667	ENSPCAG00000008006	NXT2	71	66.667	Procavia_capensis
ENSHCOG00000003893	nxt2	99	72.340	ENSPCOG00000024004	NXT2	98	72.340	Propithecus_coquereli
ENSHCOG00000003893	nxt2	100	72.727	ENSPVAG00000006149	NXT2	74	72.727	Pteropus_vampyrus
ENSHCOG00000003893	nxt2	100	93.007	ENSPNYG00000024009	nxt2	100	93.007	Pundamilia_nyererei
ENSHCOG00000003893	nxt2	99	87.234	ENSPNAG00000025785	nxt2	99	87.234	Pygocentrus_nattereri
ENSHCOG00000003893	nxt2	100	70.629	ENSRNOG00000019168	Nxt2	82	70.629	Rattus_norvegicus
ENSHCOG00000003893	nxt2	100	74.825	ENSRROG00000036216	NXT2	99	74.825	Rhinopithecus_roxellana
ENSHCOG00000003893	nxt2	100	73.427	ENSSBOG00000029386	NXT2	99	73.239	Saimiri_boliviensis_boliviensis
ENSHCOG00000003893	nxt2	59	65.476	ENSSHAG00000001265	-	93	65.476	Sarcophilus_harrisii
ENSHCOG00000003893	nxt2	96	75.000	ENSSHAG00000002955	-	94	75.000	Sarcophilus_harrisii
ENSHCOG00000003893	nxt2	99	72.340	ENSSHAG00000010539	-	98	72.340	Sarcophilus_harrisii
ENSHCOG00000003893	nxt2	100	86.713	ENSSFOG00015009870	nxt2	100	86.713	Scleropages_formosus
ENSHCOG00000003893	nxt2	100	92.308	ENSSMAG00000010366	nxt2	100	92.308	Scophthalmus_maximus
ENSHCOG00000003893	nxt2	100	90.909	ENSSDUG00000011075	nxt2	70	90.909	Seriola_dumerili
ENSHCOG00000003893	nxt2	99	91.429	ENSSLDG00000002946	-	100	89.510	Seriola_lalandi_dorsalis
ENSHCOG00000003893	nxt2	98	91.367	ENSSLDG00000024416	nxt2	99	92.029	Seriola_lalandi_dorsalis
ENSHCOG00000003893	nxt2	98	91.367	ENSSLDG00000001314	nxt2	99	92.029	Seriola_lalandi_dorsalis
ENSHCOG00000003893	nxt2	99	73.050	ENSSARG00000009307	NXT2	71	73.050	Sorex_araneus
ENSHCOG00000003893	nxt2	98	74.286	ENSSPUG00000000372	NXT2	98	74.286	Sphenodon_punctatus
ENSHCOG00000003893	nxt2	100	93.007	ENSSPAG00000015263	nxt2	100	93.007	Stegastes_partitus
ENSHCOG00000003893	nxt2	100	74.126	ENSSSCG00000012581	NXT2	99	74.126	Sus_scrofa
ENSHCOG00000003893	nxt2	99	73.759	ENSTGUG00000004286	NXT2	98	73.759	Taeniopygia_guttata
ENSHCOG00000003893	nxt2	100	87.413	ENSTRUG00000004111	nxt2	99	89.855	Takifugu_rubripes
ENSHCOG00000003893	nxt2	97	90.580	ENSTNIG00000015787	nxt2	100	89.928	Tetraodon_nigroviridis
ENSHCOG00000003893	nxt2	72	68.627	ENSTBEG00000006311	-	99	68.627	Tupaia_belangeri
ENSHCOG00000003893	nxt2	76	78.704	ENSTBEG00000007431	-	53	78.704	Tupaia_belangeri
ENSHCOG00000003893	nxt2	72	69.608	ENSTBEG00000003562	-	99	69.608	Tupaia_belangeri
ENSHCOG00000003893	nxt2	100	69.930	ENSTTRG00000005115	NXT2	72	69.930	Tursiops_truncatus
ENSHCOG00000003893	nxt2	96	76.642	ENSUAMG00000027383	NXT2	97	77.876	Ursus_americanus
ENSHCOG00000003893	nxt2	96	76.642	ENSUMAG00000023095	NXT2	97	77.876	Ursus_maritimus
ENSHCOG00000003893	nxt2	100	74.126	ENSVPAG00000007314	NXT2	71	74.126	Vicugna_pacos
ENSHCOG00000003893	nxt2	100	73.427	ENSVVUG00000010575	NXT2	98	74.638	Vulpes_vulpes
ENSHCOG00000003893	nxt2	99	66.429	ENSXETG00000008528	nxt2	99	66.429	Xenopus_tropicalis
ENSHCOG00000003893	nxt2	98	92.086	ENSXCOG00000011172	nxt2	99	92.754	Xiphophorus_couchianus
ENSHCOG00000003893	nxt2	100	92.308	ENSXMAG00000022277	nxt2	100	92.308	Xiphophorus_maculatus