EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000004071 (Gene tree)
Gene ID: 109512434
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 6530 bases
Position: chrKV879821.1:1406684-1413213
Accession: 109512434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002846	RRM_5	PF13893.6	2.5e-11	1	2
ENSHCOP00000002846	RRM_5	PF13893.6	2.5e-11	2	2
ENSHCOP00000002846	RRM_1	PF00076.22	4.6e-33	1	2
ENSHCOP00000002846	RRM_1	PF00076.22	4.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009738	-	2299	XM_019864209	ENSHCOP00000002846	514 (aa)	XP_019719768	-

Gene Model

Click here to download ENSHCOG00000004071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000004071	-	79	51.667	ENSHCOG00000012571	rbm14b	99	66.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004071	-	99	79.065	ENSAPOG00000003380	-	99	77.467	Acanthochromis_polyacanthus
ENSHCOG00000004071	-	76	58.562	ENSAPOG00000021712	rbm14b	72	58.362	Acanthochromis_polyacanthus
ENSHCOG00000004071	-	99	72.560	ENSACIG00000021173	-	94	76.404	Amphilophus_citrinellus
ENSHCOG00000004071	-	76	45.979	ENSACIG00000000381	rbm14b	82	45.473	Amphilophus_citrinellus
ENSHCOG00000004071	-	76	58.904	ENSAOCG00000008941	rbm14b	82	52.750	Amphiprion_ocellaris
ENSHCOG00000004071	-	100	78.236	ENSAOCG00000001659	-	99	77.570	Amphiprion_ocellaris
ENSHCOG00000004071	-	99	78.908	ENSAPEG00000016988	-	99	77.570	Amphiprion_percula
ENSHCOG00000004071	-	75	53.571	ENSAPEG00000003161	rbm14b	82	52.645	Amphiprion_percula
ENSHCOG00000004071	-	100	76.866	ENSATEG00000009700	-	97	75.187	Anabas_testudineus
ENSHCOG00000004071	-	75	55.025	ENSATEG00000003034	rbm14b	78	54.591	Anabas_testudineus
ENSHCOG00000004071	-	76	46.914	ENSACLG00000014355	rbm14b	80	46.817	Astatotilapia_calliptera
ENSHCOG00000004071	-	100	77.052	ENSACLG00000009112	-	92	77.095	Astatotilapia_calliptera
ENSHCOG00000004071	-	76	59.360	ENSAMXG00000007233	rbm14a	82	59.606	Astyanax_mexicanus
ENSHCOG00000004071	-	79	44.960	ENSAMXG00000031225	rbm14b	86	46.154	Astyanax_mexicanus
ENSHCOG00000004071	-	76	49.446	ENSCSEG00000000357	rbm14b	81	49.224	Cynoglossus_semilaevis
ENSHCOG00000004071	-	100	74.393	ENSCSEG00000019690	-	95	74.813	Cynoglossus_semilaevis
ENSHCOG00000004071	-	76	46.281	ENSCVAG00000013776	rbm14b	83	45.979	Cyprinodon_variegatus
ENSHCOG00000004071	-	100	75.094	ENSCVAG00000014858	-	100	75.330	Cyprinodon_variegatus
ENSHCOG00000004071	-	76	58.690	ENSDARG00000012723	rbm14a	80	59.343	Danio_rerio
ENSHCOG00000004071	-	75	58.304	ENSDARG00000103834	rbm14b	72	57.333	Danio_rerio
ENSHCOG00000004071	-	91	54.054	ENSELUG00000023633	rbm14a	82	55.479	Esox_lucius
ENSHCOG00000004071	-	73	60.563	ENSELUG00000004690	rbm14b	76	58.416	Esox_lucius
ENSHCOG00000004071	-	100	75.330	ENSFHEG00000020913	-	74	81.818	Fundulus_heteroclitus
ENSHCOG00000004071	-	76	45.697	ENSFHEG00000021265	rbm14b	83	46.516	Fundulus_heteroclitus
ENSHCOG00000004071	-	75	76.667	ENSGMOG00000010840	-	78	76.410	Gadus_morhua
ENSHCOG00000004071	-	100	71.273	ENSGAFG00000004455	-	100	68.214	Gambusia_affinis
ENSHCOG00000004071	-	76	46.091	ENSGAFG00000001924	rbm14b	83	45.791	Gambusia_affinis
ENSHCOG00000004071	-	90	78.891	ENSGACG00000020440	-	95	78.678	Gasterosteus_aculeatus
ENSHCOG00000004071	-	100	77.052	ENSHBUG00000003665	-	97	77.095	Haplochromis_burtoni
ENSHCOG00000004071	-	76	46.914	ENSHBUG00000016754	rbm14b	80	46.817	Haplochromis_burtoni
ENSHCOG00000004071	-	76	53.664	ENSIPUG00000021256	rbm14a	83	53.791	Ictalurus_punctatus
ENSHCOG00000004071	-	73	59.707	ENSIPUG00000009089	rbm14b	86	46.042	Ictalurus_punctatus
ENSHCOG00000004071	-	55	58.219	ENSKMAG00000020444	rbm14b	68	58.020	Kryptolebias_marmoratus
ENSHCOG00000004071	-	99	76.316	ENSKMAG00000008514	-	74	82.323	Kryptolebias_marmoratus
ENSHCOG00000004071	-	99	76.894	ENSLBEG00000001217	-	95	75.758	Labrus_bergylta
ENSHCOG00000004071	-	100	75.139	ENSMAMG00000021313	-	100	75.556	Mastacembelus_armatus
ENSHCOG00000004071	-	87	45.387	ENSMAMG00000014394	rbm14b	78	46.584	Mastacembelus_armatus
ENSHCOG00000004071	-	100	77.052	ENSMZEG00005001201	-	100	75.416	Maylandia_zebra
ENSHCOG00000004071	-	76	46.914	ENSMZEG00005020834	rbm14b	82	46.817	Maylandia_zebra
ENSHCOG00000004071	-	76	43.271	ENSMMOG00000012912	rbm14b	86	42.857	Mola_mola
ENSHCOG00000004071	-	94	75.813	ENSMMOG00000014501	-	94	76.967	Mola_mola
ENSHCOG00000004071	-	74	52.010	ENSMALG00000015445	rbm14b	85	52.130	Monopterus_albus
ENSHCOG00000004071	-	76	46.914	ENSNBRG00000003378	rbm14b	82	46.817	Neolamprologus_brichardi
ENSHCOG00000004071	-	99	76.504	ENSNBRG00000004960	-	94	76.548	Neolamprologus_brichardi
ENSHCOG00000004071	-	75	55.025	ENSONIG00000013035	rbm14b	82	54.839	Oreochromis_niloticus
ENSHCOG00000004071	-	90	77.453	ENSONIG00000008557	-	94	77.292	Oreochromis_niloticus
ENSHCOG00000004071	-	76	47.727	ENSORLG00000008051	rbm14b	82	47.314	Oryzias_latipes
ENSHCOG00000004071	-	100	75.895	ENSORLG00000001900	-	100	74.624	Oryzias_latipes
ENSHCOG00000004071	-	100	75.895	ENSORLG00020019144	-	100	74.624	Oryzias_latipes_hni
ENSHCOG00000004071	-	76	47.205	ENSORLG00020005551	rbm14b	80	46.998	Oryzias_latipes_hni
ENSHCOG00000004071	-	100	75.895	ENSORLG00015000082	-	100	74.624	Oryzias_latipes_hsok
ENSHCOG00000004071	-	76	47.521	ENSORLG00015022683	rbm14b	82	47.107	Oryzias_latipes_hsok
ENSHCOG00000004071	-	75	51.515	ENSOMEG00000000910	rbm14b	78	53.117	Oryzias_melastigma
ENSHCOG00000004071	-	80	85.088	ENSOMEG00000006508	-	96	94.667	Oryzias_melastigma
ENSHCOG00000004071	-	75	47.527	ENSPKIG00000009078	rbm14b	85	47.447	Paramormyrops_kingsleyae
ENSHCOG00000004071	-	76	46.694	ENSPMGG00000013064	rbm14b	83	46.392	Periophthalmus_magnuspinnatus
ENSHCOG00000004071	-	76	75.949	ENSPMGG00000018869	-	93	86.486	Periophthalmus_magnuspinnatus
ENSHCOG00000004071	-	76	82.206	ENSPFOG00000004843	-	100	68.449	Poecilia_formosa
ENSHCOG00000004071	-	76	46.914	ENSPFOG00000003614	rbm14b	83	46.201	Poecilia_formosa
ENSHCOG00000004071	-	76	82.206	ENSPLAG00000017359	-	100	68.449	Poecilia_latipinna
ENSHCOG00000004071	-	76	46.502	ENSPLAG00000001395	rbm14b	83	45.791	Poecilia_latipinna
ENSHCOG00000004071	-	76	46.502	ENSPMEG00000012911	rbm14b	83	45.791	Poecilia_mexicana
ENSHCOG00000004071	-	76	82.206	ENSPMEG00000004894	-	95	74.535	Poecilia_mexicana
ENSHCOG00000004071	-	76	45.679	ENSPREG00000003013	rbm14b	83	44.969	Poecilia_reticulata
ENSHCOG00000004071	-	76	82.206	ENSPREG00000007274	-	100	68.449	Poecilia_reticulata
ENSHCOG00000004071	-	100	77.052	ENSPNYG00000015906	-	95	77.095	Pundamilia_nyererei
ENSHCOG00000004071	-	76	46.914	ENSPNYG00000023605	rbm14b	82	46.817	Pundamilia_nyererei
ENSHCOG00000004071	-	76	55.924	ENSPNAG00000012473	rbm14a	84	56.635	Pygocentrus_nattereri
ENSHCOG00000004071	-	75	46.541	ENSPNAG00000001977	rbm14b	83	46.154	Pygocentrus_nattereri
ENSHCOG00000004071	-	80	48.057	ENSSFOG00015023796	rbm14b	88	47.239	Scleropages_formosus
ENSHCOG00000004071	-	100	76.636	ENSSMAG00000002055	-	100	74.954	Scophthalmus_maximus
ENSHCOG00000004071	-	76	59.589	ENSSMAG00000004522	rbm14b	71	59.386	Scophthalmus_maximus
ENSHCOG00000004071	-	96	78.530	ENSSDUG00000020756	-	100	78.664	Seriola_dumerili
ENSHCOG00000004071	-	76	46.598	ENSSDUG00000007975	rbm14b	82	46.091	Seriola_dumerili
ENSHCOG00000004071	-	96	78.462	ENSSLDG00000006311	-	95	78.229	Seriola_lalandi_dorsalis
ENSHCOG00000004071	-	76	46.598	ENSSLDG00000006472	rbm14b	82	46.091	Seriola_lalandi_dorsalis
ENSHCOG00000004071	-	99	78.236	ENSSPAG00000010825	-	94	77.528	Stegastes_partitus
ENSHCOG00000004071	-	55	58.562	ENSSPAG00000004231	rbm14b	81	45.885	Stegastes_partitus
ENSHCOG00000004071	-	55	58.163	ENSTRUG00000005716	rbm14b	50	58.163	Takifugu_rubripes
ENSHCOG00000004071	-	100	76.482	ENSTRUG00000009504	-	93	70.962	Takifugu_rubripes
ENSHCOG00000004071	-	75	48.878	ENSTNIG00000006844	rbm14b	79	50.493	Tetraodon_nigroviridis
ENSHCOG00000004071	-	91	74.364	ENSTNIG00000000058	-	80	81.633	Tetraodon_nigroviridis
ENSHCOG00000004071	-	76	77.259	ENSXCOG00000006825	-	94	71.190	Xiphophorus_couchianus
ENSHCOG00000004071	-	76	46.914	ENSXMAG00000008390	rbm14b	83	46.407	Xiphophorus_maculatus
ENSHCOG00000004071	-	76	82.456	ENSXMAG00000000338	-	95	73.978	Xiphophorus_maculatus