EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000004144 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 4887 bases
Position: chrKV879992.1:108269-113155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002778	zf-met	PF12874.7	5.1e-15	1	2
ENSHCOP00000002778	zf-met	PF12874.7	5.1e-15	2	2
ENSHCOP00000018976	zf-met	PF12874.7	7.1e-15	1	2
ENSHCOP00000018976	zf-met	PF12874.7	7.1e-15	2	2
ENSHCOP00000002821	zf-met	PF12874.7	1.1e-14	1	2
ENSHCOP00000002821	zf-met	PF12874.7	1.1e-14	2	2
ENSHCOP00000002778	zf-C2H2_jaz	PF12171.8	4.7e-13	1	1
ENSHCOP00000002821	zf-C2H2_jaz	PF12171.8	5e-13	1	1
ENSHCOP00000018976	zf-C2H2_jaz	PF12171.8	6.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009855	-	999	-	ENSHCOP00000002778	332 (aa)	-	-
ENSHCOT00000009791	-	942	-	ENSHCOP00000002821	313 (aa)	-	-
ENSHCOT00000009888	-	1074	-	ENSHCOP00000018976	357 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000004144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000004144	-	95	32.326	ENSHCOG00000003599	znf385a	96	41.827
ENSHCOG00000004144	-	99	31.378	ENSHCOG00000004896	znf385c	88	31.395
ENSHCOG00000004144	-	94	35.171	ENSHCOG00000003171	ZNF385A	99	36.240
ENSHCOG00000004144	-	88	30.617	ENSHCOG00000020248	-	74	31.019
ENSHCOG00000004144	-	77	38.006	ENSHCOG00000005842	-	55	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004144	-	98	38.035	ENSG00000144331	ZNF385B	98	39.362	Homo_sapiens
ENSHCOG00000004144	-	84	53.589	ENSAPOG00000004222	znf385b	81	39.899	Acanthochromis_polyacanthus
ENSHCOG00000004144	-	80	41.875	ENSAMEG00000000330	ZNF385B	74	43.144	Ailuropoda_melanoleuca
ENSHCOG00000004144	-	99	41.766	ENSACIG00000020033	znf385b	82	40.909	Amphilophus_citrinellus
ENSHCOG00000004144	-	100	44.304	ENSAOCG00000023028	-	80	44.633	Amphiprion_ocellaris
ENSHCOG00000004144	-	99	41.379	ENSAPEG00000002636	znf385b	79	40.103	Amphiprion_percula
ENSHCOG00000004144	-	63	64.662	ENSATEG00000005167	znf385b	51	48.372	Anabas_testudineus
ENSHCOG00000004144	-	100	38.750	ENSAPLG00000003705	ZNF385B	78	39.418	Anas_platyrhynchos
ENSHCOG00000004144	-	95	37.240	ENSACAG00000017419	ZNF385B	92	37.203	Anolis_carolinensis
ENSHCOG00000004144	-	98	38.035	ENSANAG00000024683	ZNF385B	92	39.362	Aotus_nancymaae
ENSHCOG00000004144	-	99	40.047	ENSACLG00000025387	znf385b	94	48.848	Astatotilapia_calliptera
ENSHCOG00000004144	-	92	50.000	ENSAMXG00000014963	znf385b	72	48.276	Astyanax_mexicanus
ENSHCOG00000004144	-	98	38.442	ENSBTAG00000003120	ZNF385B	76	39.362	Bos_taurus
ENSHCOG00000004144	-	98	38.287	ENSCJAG00000021534	ZNF385B	98	39.096	Callithrix_jacchus
ENSHCOG00000004144	-	98	37.688	ENSCAFG00000014146	ZNF385B	83	36.364	Canis_familiaris
ENSHCOG00000004144	-	99	37.500	ENSCAFG00020007213	ZNF385B	94	36.456	Canis_lupus_dingo
ENSHCOG00000004144	-	100	38.366	ENSCHIG00000024559	ZNF385B	91	36.070	Capra_hircus
ENSHCOG00000004144	-	98	38.287	ENSTSYG00000012455	ZNF385B	98	39.096	Carlito_syrichta
ENSHCOG00000004144	-	98	37.940	ENSCAPG00000006989	ZNF385B	93	38.710	Cavia_aperea
ENSHCOG00000004144	-	98	38.035	ENSCPOG00000014985	ZNF385B	98	38.710	Cavia_porcellus
ENSHCOG00000004144	-	99	37.811	ENSCCAG00000036046	ZNF385B	98	39.362	Cebus_capucinus
ENSHCOG00000004144	-	99	37.905	ENSCATG00000024097	ZNF385B	92	39.628	Cercocebus_atys
ENSHCOG00000004144	-	98	38.596	ENSCLAG00000014955	-	98	40.426	Chinchilla_lanigera
ENSHCOG00000004144	-	68	46.087	ENSCLAG00000004029	-	51	45.217	Chinchilla_lanigera
ENSHCOG00000004144	-	95	39.842	ENSCSAG00000012932	ZNF385B	98	39.362	Chlorocebus_sabaeus
ENSHCOG00000004144	-	77	40.625	ENSCHOG00000011835	ZNF385B	72	41.333	Choloepus_hoffmanni
ENSHCOG00000004144	-	98	39.037	ENSCPBG00000001823	ZNF385B	74	39.628	Chrysemys_picta_bellii
ENSHCOG00000004144	-	98	38.035	ENSCANG00000001510	ZNF385B	98	39.362	Colobus_angolensis_palliatus
ENSHCOG00000004144	-	95	39.211	ENSCGRG00001019414	Zfp385b	92	38.770	Cricetulus_griseus_chok1gshd
ENSHCOG00000004144	-	95	39.211	ENSCGRG00000003988	Zfp385b	98	38.770	Cricetulus_griseus_crigri
ENSHCOG00000004144	-	98	49.107	ENSCSEG00000005260	-	77	50.000	Cynoglossus_semilaevis
ENSHCOG00000004144	-	83	43.607	ENSCVAG00000011218	-	93	41.873	Cyprinodon_variegatus
ENSHCOG00000004144	-	78	52.020	ENSDARG00000006065	znf385b	75	51.256	Danio_rerio
ENSHCOG00000004144	-	83	32.550	ENSDNOG00000044257	-	84	31.987	Dasypus_novemcinctus
ENSHCOG00000004144	-	95	39.050	ENSDNOG00000019250	-	94	39.037	Dasypus_novemcinctus
ENSHCOG00000004144	-	99	40.152	ENSDORG00000011958	Zfp385b	87	38.000	Dipodomys_ordii
ENSHCOG00000004144	-	77	46.154	ENSETEG00000005523	ZNF385B	59	44.379	Echinops_telfairi
ENSHCOG00000004144	-	69	32.593	ENSEBUG00000009311	ZNF385B	90	32.184	Eptatretus_burgeri
ENSHCOG00000004144	-	83	35.185	ENSEBUG00000006559	znf385b	66	36.162	Eptatretus_burgeri
ENSHCOG00000004144	-	87	34.921	ENSEBUG00000014383	-	79	36.111	Eptatretus_burgeri
ENSHCOG00000004144	-	95	40.260	ENSEASG00005022300	ZNF385B	92	39.842	Equus_asinus_asinus
ENSHCOG00000004144	-	98	38.346	ENSECAG00000000538	ZNF385B	93	39.842	Equus_caballus
ENSHCOG00000004144	-	77	50.761	ENSELUG00000006932	-	74	50.000	Esox_lucius
ENSHCOG00000004144	-	98	38.861	ENSELUG00000010611	znf385b	92	39.947	Esox_lucius
ENSHCOG00000004144	-	99	39.547	ENSFCAG00000026511	ZNF385B	98	39.842	Felis_catus
ENSHCOG00000004144	-	95	40.741	ENSFALG00000003483	ZNF385B	75	40.751	Ficedula_albicollis
ENSHCOG00000004144	-	98	38.250	ENSFDAG00000021322	ZNF385B	92	38.817	Fukomys_damarensis
ENSHCOG00000004144	-	67	64.885	ENSFHEG00000009602	znf385b	88	48.372	Fundulus_heteroclitus
ENSHCOG00000004144	-	98	39.295	ENSGALG00000011283	-	93	39.189	Gallus_gallus
ENSHCOG00000004144	-	99	39.031	ENSGALG00000009012	ZNF385B	93	38.420	Gallus_gallus
ENSHCOG00000004144	-	92	50.222	ENSGAFG00000021154	znf385b	94	47.907	Gambusia_affinis
ENSHCOG00000004144	-	94	43.048	ENSGACG00000002075	znf385b	80	49.778	Gasterosteus_aculeatus
ENSHCOG00000004144	-	100	38.903	ENSGAGG00000007880	ZNF385B	94	39.628	Gopherus_agassizii
ENSHCOG00000004144	-	98	38.035	ENSGGOG00000008716	ZNF385B	98	39.362	Gorilla_gorilla
ENSHCOG00000004144	-	98	38.791	ENSHGLG00000004054	ZNF385B	98	40.160	Heterocephalus_glaber_female
ENSHCOG00000004144	-	98	38.481	ENSHGLG00100011134	ZNF385B	98	39.037	Heterocephalus_glaber_male
ENSHCOG00000004144	-	95	39.589	ENSIPUG00000005866	znf385b	75	39.895	Ictalurus_punctatus
ENSHCOG00000004144	-	98	38.287	ENSSTOG00000009646	ZNF385B	98	39.362	Ictidomys_tridecemlineatus
ENSHCOG00000004144	-	80	40.125	ENSJJAG00000011065	Zfp385b	79	42.123	Jaculus_jaculus
ENSHCOG00000004144	-	94	46.000	ENSKMAG00000005260	-	93	48.372	Kryptolebias_marmoratus
ENSHCOG00000004144	-	85	48.718	ENSLBEG00000020454	znf385b	94	46.725	Labrus_bergylta
ENSHCOG00000004144	-	95	40.568	ENSLACG00000010531	ZNF385B	92	38.560	Latimeria_chalumnae
ENSHCOG00000004144	-	60	47.926	ENSLOCG00000006712	-	89	40.122	Lepisosteus_oculatus
ENSHCOG00000004144	-	95	41.253	ENSLOCG00000006420	znf385b	80	40.751	Lepisosteus_oculatus
ENSHCOG00000004144	-	98	38.442	ENSLAFG00000016135	ZNF385B	76	39.842	Loxodonta_africana
ENSHCOG00000004144	-	98	38.035	ENSMFAG00000043013	ZNF385B	98	39.628	Macaca_fascicularis
ENSHCOG00000004144	-	99	37.965	ENSMMUG00000003855	ZNF385B	98	39.628	Macaca_mulatta
ENSHCOG00000004144	-	98	38.035	ENSMNEG00000033615	ZNF385B	98	39.628	Macaca_nemestrina
ENSHCOG00000004144	-	98	38.035	ENSMLEG00000034603	ZNF385B	98	39.628	Mandrillus_leucophaeus
ENSHCOG00000004144	-	80	45.706	ENSMAMG00000018932	znf385b	80	42.893	Mastacembelus_armatus
ENSHCOG00000004144	-	90	46.835	ENSMZEG00005021439	znf385b	55	48.848	Maylandia_zebra
ENSHCOG00000004144	-	95	40.584	ENSMGAG00000009267	ZNF385B	93	38.978	Meleagris_gallopavo
ENSHCOG00000004144	-	98	37.437	ENSMAUG00000017440	Zfp385b	98	38.933	Mesocricetus_auratus
ENSHCOG00000004144	-	98	38.791	ENSMICG00000016924	ZNF385B	98	39.894	Microcebus_murinus
ENSHCOG00000004144	-	95	39.426	ENSMOCG00000006938	Zfp385b	98	38.992	Microtus_ochrogaster
ENSHCOG00000004144	-	98	44.909	ENSMMOG00000019718	znf385b	75	42.973	Mola_mola
ENSHCOG00000004144	-	95	40.314	ENSMODG00000010201	ZNF385B	92	40.053	Monodelphis_domestica
ENSHCOG00000004144	-	93	48.444	ENSMALG00000001871	-	57	47.907	Monopterus_albus
ENSHCOG00000004144	-	98	37.531	MGP_CAROLIEiJ_G0023695	Zfp385b	98	38.503	Mus_caroli
ENSHCOG00000004144	-	98	37.280	ENSMUSG00000027016	Zfp385b	98	38.235	Mus_musculus
ENSHCOG00000004144	-	95	39.211	MGP_PahariEiJ_G0025146	Zfp385b	98	38.503	Mus_pahari
ENSHCOG00000004144	-	98	37.531	MGP_SPRETEiJ_G0024616	Zfp385b	98	38.503	Mus_spretus
ENSHCOG00000004144	-	78	40.123	ENSMPUG00000002440	ZNF385B	63	38.509	Mustela_putorius_furo
ENSHCOG00000004144	-	98	38.539	ENSMLUG00000013424	ZNF385B	94	39.628	Myotis_lucifugus
ENSHCOG00000004144	-	95	39.683	ENSNGAG00000010574	Zfp385b	98	39.410	Nannospalax_galili
ENSHCOG00000004144	-	83	44.484	ENSNBRG00000019339	ZNF385B	76	45.058	Neolamprologus_brichardi
ENSHCOG00000004144	-	98	38.035	ENSNLEG00000006238	ZNF385B	98	39.362	Nomascus_leucogenys
ENSHCOG00000004144	-	59	34.848	ENSMEUG00000010020	ZNF385B	67	30.195	Notamacropus_eugenii
ENSHCOG00000004144	-	98	39.410	ENSODEG00000012465	ZNF385B	91	41.011	Octodon_degus
ENSHCOG00000004144	-	83	52.913	ENSONIG00000006893	znf385b	74	40.100	Oreochromis_niloticus
ENSHCOG00000004144	-	94	39.418	ENSOANG00000008647	ZNF385B	69	39.362	Ornithorhynchus_anatinus
ENSHCOG00000004144	-	98	38.442	ENSOCUG00000004877	ZNF385B	93	39.362	Oryctolagus_cuniculus
ENSHCOG00000004144	-	89	46.667	ENSORLG00000027346	znf385b	94	37.931	Oryzias_latipes
ENSHCOG00000004144	-	89	47.059	ENSORLG00020015174	znf385b	98	37.931	Oryzias_latipes_hni
ENSHCOG00000004144	-	89	46.667	ENSORLG00015018108	znf385b	94	37.701	Oryzias_latipes_hsok
ENSHCOG00000004144	-	96	47.059	ENSOMEG00000015261	znf385b	93	38.955	Oryzias_melastigma
ENSHCOG00000004144	-	99	38.155	ENSOGAG00000008520	ZNF385B	90	39.628	Otolemur_garnettii
ENSHCOG00000004144	-	98	38.287	ENSOARG00000016924	ZNF385B	94	39.362	Ovis_aries
ENSHCOG00000004144	-	98	38.035	ENSPPAG00000035510	ZNF385B	98	39.362	Pan_paniscus
ENSHCOG00000004144	-	98	38.500	ENSPPRG00000001753	ZNF385B	98	40.106	Panthera_pardus
ENSHCOG00000004144	-	75	42.763	ENSPTIG00000020003	ZNF385B	66	42.857	Panthera_tigris_altaica
ENSHCOG00000004144	-	98	38.035	ENSPTRG00000012696	ZNF385B	98	39.362	Pan_troglodytes
ENSHCOG00000004144	-	98	38.035	ENSPANG00000004252	ZNF385B	92	39.628	Papio_anubis
ENSHCOG00000004144	-	95	41.995	ENSPKIG00000021255	znf385b	77	42.424	Paramormyrops_kingsleyae
ENSHCOG00000004144	-	98	38.060	ENSPSIG00000008641	ZNF385B	70	39.362	Pelodiscus_sinensis
ENSHCOG00000004144	-	95	38.947	ENSPEMG00000011546	Zfp385b	98	38.710	Peromyscus_maniculatus_bairdii
ENSHCOG00000004144	-	87	30.435	ENSPMAG00000002991	-	89	31.515	Petromyzon_marinus
ENSHCOG00000004144	-	83	36.615	ENSPMAG00000005906	znf385b	90	37.003	Petromyzon_marinus
ENSHCOG00000004144	-	59	40.206	ENSPMAG00000004000	-	99	39.175	Petromyzon_marinus
ENSHCOG00000004144	-	100	39.547	ENSPCIG00000011178	ZNF385B	92	40.431	Phascolarctos_cinereus
ENSHCOG00000004144	-	87	53.488	ENSPFOG00000015103	znf385b	100	48.305	Poecilia_formosa
ENSHCOG00000004144	-	92	50.000	ENSPLAG00000021353	-	73	48.077	Poecilia_latipinna
ENSHCOG00000004144	-	98	42.752	ENSPREG00000004272	znf385b	82	42.424	Poecilia_reticulata
ENSHCOG00000004144	-	95	39.523	ENSPPYG00000012984	ZNF385B	77	39.362	Pongo_abelii
ENSHCOG00000004144	-	98	38.191	ENSPCAG00000000584	ZNF385B	77	38.667	Procavia_capensis
ENSHCOG00000004144	-	98	38.791	ENSPCOG00000024514	ZNF385B	98	39.894	Propithecus_coquereli
ENSHCOG00000004144	-	98	40.160	ENSPNYG00000010394	znf385b	81	41.341	Pundamilia_nyererei
ENSHCOG00000004144	-	95	39.447	ENSPNAG00000024711	znf385b	75	38.422	Pygocentrus_nattereri
ENSHCOG00000004144	-	95	39.314	ENSRNOG00000019065	Zfp385b	92	38.770	Rattus_norvegicus
ENSHCOG00000004144	-	98	38.035	ENSRBIG00000043516	ZNF385B	98	39.362	Rhinopithecus_bieti
ENSHCOG00000004144	-	98	38.035	ENSRROG00000003706	ZNF385B	98	39.362	Rhinopithecus_roxellana
ENSHCOG00000004144	-	98	38.095	ENSSBOG00000033350	ZNF385B	98	39.362	Saimiri_boliviensis_boliviensis
ENSHCOG00000004144	-	83	42.810	ENSSHAG00000015010	ZNF385B	89	42.173	Sarcophilus_harrisii
ENSHCOG00000004144	-	95	41.489	ENSSFOG00015011882	znf385b	91	44.807	Scleropages_formosus
ENSHCOG00000004144	-	93	37.539	ENSSFOG00015021104	-	100	37.736	Scleropages_formosus
ENSHCOG00000004144	-	99	33.509	ENSSFOG00015014622	-	87	33.429	Scleropages_formosus
ENSHCOG00000004144	-	94	36.464	ENSSFOG00015011689	-	61	45.489	Scleropages_formosus
ENSHCOG00000004144	-	68	65.891	ENSSMAG00000004759	znf385b	75	48.507	Scophthalmus_maximus
ENSHCOG00000004144	-	96	42.740	ENSSDUG00000010686	znf385b	86	43.266	Seriola_dumerili
ENSHCOG00000004144	-	96	43.333	ENSSLDG00000023206	znf385b	74	42.532	Seriola_lalandi_dorsalis
ENSHCOG00000004144	-	77	40.594	ENSSARG00000005573	ZNF385B	72	40.288	Sorex_araneus
ENSHCOG00000004144	-	95	39.096	ENSSPUG00000006364	ZNF385B	92	38.378	Sphenodon_punctatus
ENSHCOG00000004144	-	64	65.385	ENSSPAG00000008778	-	83	41.117	Stegastes_partitus
ENSHCOG00000004144	-	100	38.366	ENSSSCG00000023181	ZNF385B	90	36.567	Sus_scrofa
ENSHCOG00000004144	-	98	38.987	ENSTGUG00000009316	ZNF385B	75	40.533	Taeniopygia_guttata
ENSHCOG00000004144	-	100	39.231	ENSTRUG00000014480	znf385b	78	41.989	Takifugu_rubripes
ENSHCOG00000004144	-	83	42.997	ENSTNIG00000005547	znf385b	89	41.748	Tetraodon_nigroviridis
ENSHCOG00000004144	-	75	42.904	ENSTBEG00000013865	ZNF385B	72	42.000	Tupaia_belangeri
ENSHCOG00000004144	-	95	40.369	ENSTTRG00000006824	ZNF385B	77	40.107	Tursiops_truncatus
ENSHCOG00000004144	-	75	42.244	ENSUMAG00000016683	ZNF385B	81	42.333	Ursus_maritimus
ENSHCOG00000004144	-	83	38.835	ENSVPAG00000003514	ZNF385B	65	38.924	Vicugna_pacos
ENSHCOG00000004144	-	78	39.938	ENSVVUG00000009783	ZNF385B	83	38.629	Vulpes_vulpes
ENSHCOG00000004144	-	98	40.153	ENSXETG00000015059	znf385b	93	39.503	Xenopus_tropicalis
ENSHCOG00000004144	-	70	51.739	ENSXCOG00000018547	-	54	52.321	Xiphophorus_couchianus
ENSHCOG00000004144	-	90	48.000	ENSXMAG00000001492	znf385b	70	48.372	Xiphophorus_maculatus