EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSHCOG00000004158 (Gene tree)
Gene ID
109511738
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Plus strand
Length
20282 bases
Position
chrKV879801.1:3557063-3577344
Accession
109511738
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000019037CSDPF00313.221.6e-8115
ENSHCOP00000019037CSDPF00313.221.6e-8125
ENSHCOP00000019037CSDPF00313.221.6e-8135
ENSHCOP00000019037CSDPF00313.221.6e-8145
ENSHCOP00000019037CSDPF00313.221.6e-8155
ENSHCOP00000002856CSDPF00313.224.3e-8115
ENSHCOP00000002856CSDPF00313.224.3e-8125
ENSHCOP00000002856CSDPF00313.224.3e-8135
ENSHCOP00000002856CSDPF00313.224.3e-8145
ENSHCOP00000002856CSDPF00313.224.3e-8155
ENSHCOP00000019049CSDPF00313.227.4e-8115
ENSHCOP00000019049CSDPF00313.227.4e-8125
ENSHCOP00000019049CSDPF00313.227.4e-8135
ENSHCOP00000019049CSDPF00313.227.4e-8145
ENSHCOP00000019049CSDPF00313.227.4e-8155
ENSHCOP00000002864CSDPF00313.229.2e-8115
ENSHCOP00000002864CSDPF00313.229.2e-8125
ENSHCOP00000002864CSDPF00313.229.2e-8135
ENSHCOP00000002864CSDPF00313.229.2e-8145
ENSHCOP00000002864CSDPF00313.229.2e-8155
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000009751-2310-ENSHCOP00000019037769 (aa)--
ENSHCOT00000009731-5058-ENSHCOP00000002856844 (aa)--
ENSHCOT00000009719-5229XM_019863002ENSHCOP00000019049901 (aa)XP_019718561UPI00094E1246
ENSHCOT00000009711-5241XM_019863000ENSHCOP00000002864905 (aa)XP_019718559-
Gene Model
Click here to download ENSHCOG00000004158's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004158's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000004158csde110076.333ENSG00000009307CSDE110083.088Homo_sapiens
ENSHCOG00000004158csde110091.417ENSAPOG00000015538csde110091.417Acanthochromis_polyacanthus
ENSHCOG00000004158csde110075.553ENSAMEG00000017129CSDE19475.584Ailuropoda_melanoleuca
ENSHCOG00000004158csde19088.378ENSACIG00000015175csde110088.378Amphilophus_citrinellus
ENSHCOG00000004158csde110091.417ENSAOCG00000011510csde110091.417Amphiprion_ocellaris
ENSHCOG00000004158csde110091.547ENSAPEG00000007194csde110091.547Amphiprion_percula
ENSHCOG00000004158csde110090.247ENSATEG00000003864csde110090.247Anabas_testudineus
ENSHCOG00000004158csde110077.633ENSAPLG00000008797CSDE110077.633Anas_platyrhynchos
ENSHCOG00000004158csde110075.000ENSACAG00000003120CSDE110077.625Anolis_carolinensis
ENSHCOG00000004158csde19360.777ENSANAG00000028396-9161.905Aotus_nancymaae
ENSHCOG00000004158csde110076.203ENSANAG00000024665CSDE19875.151Aotus_nancymaae
ENSHCOG00000004158csde110090.897ENSACLG00000013296csde110090.977Astatotilapia_calliptera
ENSHCOG00000004158csde110084.695ENSAMXG00000007436csde110084.695Astyanax_mexicanus
ENSHCOG00000004158csde110076.073ENSBTAG00000000678CSDE110076.073Bos_taurus
ENSHCOG00000004158csde110076.203ENSCJAG00000012565CSDE19875.271Callithrix_jacchus
ENSHCOG00000004158csde19876.760ENSCAFG00000009618CSDE19476.790Canis_familiaris
ENSHCOG00000004158csde110076.593ENSCAFG00020000481CSDE110076.593Canis_lupus_dingo
ENSHCOG00000004158csde110076.073ENSCHIG00000017250CSDE110076.073Capra_hircus
ENSHCOG00000004158csde110076.333ENSTSYG00000003747CSDE110076.333Carlito_syrichta
ENSHCOG00000004158csde19575.460ENSCAPG00000015128CSDE110075.460Cavia_aperea
ENSHCOG00000004158csde110070.923ENSCPOG00000040388CSDE110072.215Cavia_porcellus
ENSHCOG00000004158csde110076.203ENSCCAG00000036794CSDE110075.875Cebus_capucinus
ENSHCOG00000004158csde19754.222ENSCCAG00000030878-9154.222Cebus_capucinus
ENSHCOG00000004158csde19555.450ENSCCAG00000033677-9955.450Cebus_capucinus
ENSHCOG00000004158csde110076.333ENSCATG00000036962CSDE19875.392Cercocebus_atys
ENSHCOG00000004158csde110076.593ENSCLAG00000006618CSDE110076.593Chinchilla_lanigera
ENSHCOG00000004158csde110073.375ENSCSAG00000001658CSDE19875.392Chlorocebus_sabaeus
ENSHCOG00000004158csde19581.308ENSCHOG00000000918CSDE18880.122Choloepus_hoffmanni
ENSHCOG00000004158csde110077.633ENSCPBG00000016547CSDE110077.633Chrysemys_picta_bellii
ENSHCOG00000004158csde19841.872ENSCING00000014465-9842.068Ciona_intestinalis
ENSHCOG00000004158csde19740.874ENSCSAVG00000008100-10041.466Ciona_savignyi
ENSHCOG00000004158csde19969.526ENSCANG00000031069-9478.519Colobus_angolensis_palliatus
ENSHCOG00000004158csde110076.333ENSCANG00000035096CSDE19776.333Colobus_angolensis_palliatus
ENSHCOG00000004158csde110075.813ENSCGRG00001016833-10075.813Cricetulus_griseus_chok1gshd
ENSHCOG00000004158csde110061.769ENSCGRG00001014011-10061.769Cricetulus_griseus_chok1gshd
ENSHCOG00000004158csde19772.222ENSCGRG00000002225-10072.222Cricetulus_griseus_crigri
ENSHCOG00000004158csde110072.174ENSCGRG00000005831-10072.174Cricetulus_griseus_crigri
ENSHCOG00000004158csde110089.857ENSCSEG00000002620csde110089.857Cynoglossus_semilaevis
ENSHCOG00000004158csde110090.166ENSCVAG00000001344csde110090.166Cyprinodon_variegatus
ENSHCOG00000004158csde110082.103ENSDARG00000074758csde110085.232Danio_rerio
ENSHCOG00000004158csde15657.273ENSDNOG00000034464-9957.273Dasypus_novemcinctus
ENSHCOG00000004158csde110076.364ENSDNOG00000010287-9376.364Dasypus_novemcinctus
ENSHCOG00000004158csde19975.224ENSDORG00000011609Csde110075.750Dipodomys_ordii
ENSHCOG00000004158csde19648.163FBgn0263352Unr8648.988Drosophila_melanogaster
ENSHCOG00000004158csde19579.508ENSETEG00000002491-8571.182Echinops_telfairi
ENSHCOG00000004158csde19958.984ENSETEG00000013678-9958.984Echinops_telfairi
ENSHCOG00000004158csde19067.874ENSETEG00000006280-10067.874Echinops_telfairi
ENSHCOG00000004158csde17953.960ENSETEG00000007109-9953.960Echinops_telfairi
ENSHCOG00000004158csde19953.941ENSEBUG00000008647csde19953.938Eptatretus_burgeri
ENSHCOG00000004158csde110076.723ENSEASG00005006284CSDE110076.375Equus_asinus_asinus
ENSHCOG00000004158csde110076.723ENSECAG00000020885CSDE110076.375Equus_caballus
ENSHCOG00000004158csde19380.312ENSEEUG00000006286CSDE16880.374Erinaceus_europaeus
ENSHCOG00000004158csde110085.640ENSELUG00000015507csde110085.640Esox_lucius
ENSHCOG00000004158csde110076.593ENSFCAG00000029266CSDE110076.593Felis_catus
ENSHCOG00000004158csde110074.250ENSFALG00000003407CSDE110076.875Ficedula_albicollis
ENSHCOG00000004158csde19975.224ENSFDAG00000007882CSDE110075.750Fukomys_damarensis
ENSHCOG00000004158csde19889.536ENSFHEG00000010799csde110089.599Fundulus_heteroclitus
ENSHCOG00000004158csde19985.088ENSGMOG00000012731csde110088.095Gadus_morhua
ENSHCOG00000004158csde19874.522ENSGALG00000002139CSDE19877.197Gallus_gallus
ENSHCOG00000004158csde19489.466ENSGAFG00000005241csde19589.466Gambusia_affinis
ENSHCOG00000004158csde19986.575ENSGACG00000004544csde110089.711Gasterosteus_aculeatus
ENSHCOG00000004158csde110077.763ENSGAGG00000017685CSDE110077.375Gopherus_agassizii
ENSHCOG00000004158csde110076.333ENSGGOG00000002164CSDE110076.333Gorilla_gorilla
ENSHCOG00000004158csde110091.232ENSHBUG00000020315csde110091.232Haplochromis_burtoni
ENSHCOG00000004158csde110062.642ENSHGLG00000019549-10064.035Heterocephalus_glaber_female
ENSHCOG00000004158csde19765.333ENSHGLG00000010039-10065.333Heterocephalus_glaber_female
ENSHCOG00000004158csde19959.324ENSHGLG00000000650-9961.827Heterocephalus_glaber_female
ENSHCOG00000004158csde19966.418ENSHGLG00000008555-10066.418Heterocephalus_glaber_female
ENSHCOG00000004158csde110068.921ENSHGLG00000009620-10069.441Heterocephalus_glaber_female
ENSHCOG00000004158csde19966.055ENSHGLG00000007471-9866.055Heterocephalus_glaber_female
ENSHCOG00000004158csde110068.612ENSHGLG00000003829-10068.612Heterocephalus_glaber_female
ENSHCOG00000004158csde110062.727ENSHGLG00100001846-10062.727Heterocephalus_glaber_male
ENSHCOG00000004158csde19759.556ENSHGLG00100004833-10059.556Heterocephalus_glaber_male
ENSHCOG00000004158csde19962.422ENSHGLG00100002245-9964.919Heterocephalus_glaber_male
ENSHCOG00000004158csde19364.256ENSHGLG00100004195-10064.256Heterocephalus_glaber_male
ENSHCOG00000004158csde19765.333ENSHGLG00100006910-10065.333Heterocephalus_glaber_male
ENSHCOG00000004158csde110064.332ENSHGLG00100012072-10064.332Heterocephalus_glaber_male
ENSHCOG00000004158csde19965.400ENSHGLG00100007287-9865.400Heterocephalus_glaber_male
ENSHCOG00000004158csde110076.203ENSHGLG00100019438-10076.203Heterocephalus_glaber_male
ENSHCOG00000004158csde110083.398ENSIPUG00000000355csde110083.398Ictalurus_punctatus
ENSHCOG00000004158csde110062.755ENSSTOG00000030994-10062.755Ictidomys_tridecemlineatus
ENSHCOG00000004158csde19062.238ENSSTOG00000032722-9962.238Ictidomys_tridecemlineatus
ENSHCOG00000004158csde19974.925ENSJJAG00000019571Csde110075.500Jaculus_jaculus
ENSHCOG00000004158csde110085.661ENSKMAG00000005685csde110089.082Kryptolebias_marmoratus
ENSHCOG00000004158csde110090.377ENSLBEG00000014770csde110090.377Labrus_bergylta
ENSHCOG00000004158csde110072.469ENSLACG00000018452CSDE19972.951Latimeria_chalumnae
ENSHCOG00000004158csde110081.955ENSLOCG00000010413csde110082.670Lepisosteus_oculatus
ENSHCOG00000004158csde110076.073ENSLAFG00000007150CSDE19676.073Loxodonta_africana
ENSHCOG00000004158csde110076.333ENSMFAG00000003674CSDE110076.333Macaca_fascicularis
ENSHCOG00000004158csde110076.333ENSMMUG00000001974CSDE110076.333Macaca_mulatta
ENSHCOG00000004158csde110076.333ENSMNEG00000045247CSDE19875.392Macaca_nemestrina
ENSHCOG00000004158csde110076.073ENSMLEG00000038673CSDE19875.151Mandrillus_leucophaeus
ENSHCOG00000004158csde110091.417ENSMAMG00000008821csde110091.417Mastacembelus_armatus
ENSHCOG00000004158csde110090.897ENSMZEG00005021675csde110090.897Maylandia_zebra
ENSHCOG00000004158csde110077.532ENSMGAG00000016381CSDE110077.532Meleagris_gallopavo
ENSHCOG00000004158csde19974.925ENSMAUG00000014031Csde110075.500Mesocricetus_auratus
ENSHCOG00000004158csde110076.593ENSMICG00000002050CSDE19875.513Microcebus_murinus
ENSHCOG00000004158csde110075.813ENSMOCG00000018960Csde110075.813Microtus_ochrogaster
ENSHCOG00000004158csde110091.157ENSMMOG00000015075csde110091.157Mola_mola
ENSHCOG00000004158csde110076.654ENSMODG00000004685CSDE110077.000Monodelphis_domestica
ENSHCOG00000004158csde110090.767ENSMALG00000007132csde110090.767Monopterus_albus
ENSHCOG00000004158csde110075.943MGP_CAROLIEiJ_G0025444Csde110083.444Mus_caroli
ENSHCOG00000004158csde110075.943ENSMUSG00000068823Csde110083.444Mus_musculus
ENSHCOG00000004158csde110075.943MGP_PahariEiJ_G0026888Csde110083.444Mus_pahari
ENSHCOG00000004158csde110075.943MGP_SPRETEiJ_G0026394Csde110083.444Mus_spretus
ENSHCOG00000004158csde19873.724ENSMPUG00000005753CSDE19976.403Mustela_putorius_furo
ENSHCOG00000004158csde110076.073ENSMLUG00000005681CSDE19971.919Myotis_lucifugus
ENSHCOG00000004158csde19974.925ENSNGAG00000021929Csde110075.500Nannospalax_galili
ENSHCOG00000004158csde19751.333ENSNGAG00000012599-10051.333Nannospalax_galili
ENSHCOG00000004158csde110090.897ENSNBRG00000020808csde110090.897Neolamprologus_brichardi
ENSHCOG00000004158csde110076.333ENSNLEG00000004842CSDE19875.392Nomascus_leucogenys
ENSHCOG00000004158csde19381.553ENSMEUG00000002677CSDE19581.553Notamacropus_eugenii
ENSHCOG00000004158csde19481.308ENSOPRG00000005002CSDE18073.188Ochotona_princeps
ENSHCOG00000004158csde19750.993ENSODEG00000005979-9851.214Octodon_degus
ENSHCOG00000004158csde19975.075ENSODEG00000007383-10075.500Octodon_degus
ENSHCOG00000004158csde110085.435ENSONIG00000009309csde110088.739Oreochromis_niloticus
ENSHCOG00000004158csde110079.661ENSOANG00000003346-8279.661Ornithorhynchus_anatinus
ENSHCOG00000004158csde110076.203ENSOCUG00000016438CSDE19875.151Oryctolagus_cuniculus
ENSHCOG00000004158csde110088.947ENSORLG00000000707csde110088.947Oryzias_latipes
ENSHCOG00000004158csde110088.507ENSORLG00020005148csde110088.389Oryzias_latipes_hni
ENSHCOG00000004158csde110088.817ENSORLG00015019415csde110088.817Oryzias_latipes_hsok
ENSHCOG00000004158csde110088.557ENSOMEG00000015656csde110089.077Oryzias_melastigma
ENSHCOG00000004158csde110076.463ENSOGAG00000012127CSDE19872.957Otolemur_garnettii
ENSHCOG00000004158csde110076.073ENSOARG00000020034CSDE19872.793Ovis_aries
ENSHCOG00000004158csde110076.333ENSPPAG00000025861CSDE110076.333Pan_paniscus
ENSHCOG00000004158csde110076.593ENSPPRG00000006747CSDE19875.633Panthera_pardus
ENSHCOG00000004158csde110076.593ENSPTIG00000015468CSDE110076.250Panthera_tigris_altaica
ENSHCOG00000004158csde110076.333ENSPTRG00000033721CSDE110076.000Pan_troglodytes
ENSHCOG00000004158csde110076.333ENSPANG00000018873CSDE110076.333Papio_anubis
ENSHCOG00000004158csde110084.265ENSPKIG00000009459csde110084.265Paramormyrops_kingsleyae
ENSHCOG00000004158csde19675.055ENSPSIG00000003823CSDE19679.691Pelodiscus_sinensis
ENSHCOG00000004158csde110088.312ENSPMGG00000000772csde110088.312Periophthalmus_magnuspinnatus
ENSHCOG00000004158csde19975.224ENSPEMG00000020357-10075.750Peromyscus_maniculatus_bairdii
ENSHCOG00000004158csde110074.500ENSPCIG00000022587CSDE110077.125Phascolarctos_cinereus
ENSHCOG00000004158csde19789.114ENSPFOG00000012664csde110090.047Poecilia_formosa
ENSHCOG00000004158csde19584.332ENSPLAG00000017680csde19384.332Poecilia_latipinna
ENSHCOG00000004158csde19584.485ENSPMEG00000005094csde19584.485Poecilia_mexicana
ENSHCOG00000004158csde110090.284ENSPREG00000011631csde110090.284Poecilia_reticulata
ENSHCOG00000004158csde110073.250ENSPPYG00000000996CSDE110075.875Pongo_abelii
ENSHCOG00000004158csde19582.243ENSPCAG00000014368CSDE19475.987Procavia_capensis
ENSHCOG00000004158csde19069.517ENSPCOG00000008223-9269.517Propithecus_coquereli
ENSHCOG00000004158csde110076.593ENSPCOG00000017893CSDE110076.593Propithecus_coquereli
ENSHCOG00000004158csde110071.261ENSPVAG00000008225CSDE19571.299Pteropus_vampyrus
ENSHCOG00000004158csde110090.897ENSPNYG00000013745csde110090.897Pundamilia_nyererei
ENSHCOG00000004158csde110085.992ENSPNAG00000001958csde110085.992Pygocentrus_nattereri
ENSHCOG00000004158csde110072.875ENSRNOG00000061058Csde110075.500Rattus_norvegicus
ENSHCOG00000004158csde110073.377ENSRBIG00000038088-10073.377Rhinopithecus_bieti
ENSHCOG00000004158csde110072.114ENSRBIG00000038966-9871.084Rhinopithecus_bieti
ENSHCOG00000004158csde110076.333ENSRROG00000043101CSDE19875.392Rhinopithecus_roxellana
ENSHCOG00000004158csde110076.203ENSSBOG00000035592CSDE19875.271Saimiri_boliviensis_boliviensis
ENSHCOG00000004158csde110077.503ENSSHAG00000009831CSDE110077.503Sarcophilus_harrisii
ENSHCOG00000004158csde110090.476ENSSFOG00015007498csde19390.476Scleropages_formosus
ENSHCOG00000004158csde110091.157ENSSMAG00000007203csde110091.157Scophthalmus_maximus
ENSHCOG00000004158csde110092.068ENSSDUG00000015380csde110092.068Seriola_dumerili
ENSHCOG00000004158csde110092.068ENSSLDG00000008819csde110092.068Seriola_lalandi_dorsalis
ENSHCOG00000004158csde110075.943ENSSARG00000000738CSDE19971.667Sorex_araneus
ENSHCOG00000004158csde110077.763ENSSPUG00000008714CSDE110077.763Sphenodon_punctatus
ENSHCOG00000004158csde110091.417ENSSPAG00000000716csde110091.417Stegastes_partitus
ENSHCOG00000004158csde110076.723ENSSSCG00000006752CSDE110076.723Sus_scrofa
ENSHCOG00000004158csde110073.441ENSTGUG00000000972CSDE110076.060Taeniopygia_guttata
ENSHCOG00000004158csde110084.525ENSTRUG00000007996csde110084.525Takifugu_rubripes
ENSHCOG00000004158csde18891.188ENSTNIG00000010878csde110091.188Tetraodon_nigroviridis
ENSHCOG00000004158csde19279.141ENSTBEG00000011880-6079.141Tupaia_belangeri
ENSHCOG00000004158csde110076.073ENSTTRG00000015583CSDE19872.716Tursiops_truncatus
ENSHCOG00000004158csde19280.719ENSUAMG00000021779-9880.719Ursus_americanus
ENSHCOG00000004158csde18972.231ENSUAMG00000024289-9972.231Ursus_americanus
ENSHCOG00000004158csde110070.221ENSUMAG00000009720-9770.221Ursus_maritimus
ENSHCOG00000004158csde19271.127ENSUMAG00000011714-9971.801Ursus_maritimus
ENSHCOG00000004158csde110078.788ENSVPAG00000000749CSDE17978.788Vicugna_pacos
ENSHCOG00000004158csde19372.012ENSVVUG00000009890CSDE19475.073Vulpes_vulpes
ENSHCOG00000004158csde110073.848ENSXETG00000021448csde110076.339Xenopus_tropicalis
ENSHCOG00000004158csde19491.721ENSXCOG00000000035csde18991.721Xiphophorus_couchianus
ENSHCOG00000004158csde110090.521ENSXMAG00000009080csde110090.521Xiphophorus_maculatus

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