EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000004179 (Gene tree)
Gene ID: 109514525
Gene Symbol: dbr1
Alias: wu:fc08f08|zgc:63930
Full Name: debranching RNA lariats 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 4908 bases
Position: chrKV879880.1:283642-288549
Accession: 109514525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002935	DBR1	PF05011.13	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009588	-	1836	XM_019867703	ENSHCOP00000002935	542 (aa)	XP_019723262	UPI00094E1504

Gene Model

Click here to download ENSHCOG00000004179's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004179's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004179	dbr1	98	56.147	ENSG00000138231	DBR1	94	79.279	Homo_sapiens
ENSHCOG00000004179	dbr1	99	73.913	ENSAPOG00000004318	dbr1	99	73.285	Acanthochromis_polyacanthus
ENSHCOG00000004179	dbr1	98	56.058	ENSAMEG00000006272	DBR1	99	56.172	Ailuropoda_melanoleuca
ENSHCOG00000004179	dbr1	99	73.488	ENSACIG00000020512	dbr1	99	75.360	Amphilophus_citrinellus
ENSHCOG00000004179	dbr1	99	73.370	ENSAOCG00000008060	dbr1	99	72.464	Amphiprion_ocellaris
ENSHCOG00000004179	dbr1	99	73.551	ENSAPEG00000021944	dbr1	99	72.645	Amphiprion_percula
ENSHCOG00000004179	dbr1	99	74.234	ENSATEG00000019673	dbr1	99	76.306	Anabas_testudineus
ENSHCOG00000004179	dbr1	99	56.284	ENSACAG00000016760	DBR1	99	56.284	Anolis_carolinensis
ENSHCOG00000004179	dbr1	80	64.773	ENSANAG00000028952	DBR1	99	56.962	Aotus_nancymaae
ENSHCOG00000004179	dbr1	99	73.466	ENSACLG00000024027	dbr1	99	73.466	Astatotilapia_calliptera
ENSHCOG00000004179	dbr1	99	65.385	ENSAMXG00000030736	dbr1	99	65.385	Astyanax_mexicanus
ENSHCOG00000004179	dbr1	99	55.456	ENSBTAG00000019949	DBR1	99	55.456	Bos_taurus
ENSHCOG00000004179	dbr1	70	46.819	WBGene00000937	dbr-1	78	46.819	Caenorhabditis_elegans
ENSHCOG00000004179	dbr1	98	56.856	ENSCJAG00000002433	DBR1	99	56.835	Callithrix_jacchus
ENSHCOG00000004179	dbr1	79	64.896	ENSCAFG00000007501	DBR1	99	56.673	Canis_familiaris
ENSHCOG00000004179	dbr1	79	64.896	ENSCAFG00020008060	DBR1	99	56.673	Canis_lupus_dingo
ENSHCOG00000004179	dbr1	99	55.098	ENSCHIG00000026937	DBR1	99	55.098	Capra_hircus
ENSHCOG00000004179	dbr1	100	53.697	ENSTSYG00000005317	DBR1	99	53.345	Carlito_syrichta
ENSHCOG00000004179	dbr1	98	53.539	ENSCPOG00000006179	DBR1	99	52.962	Cavia_porcellus
ENSHCOG00000004179	dbr1	98	56.831	ENSCCAG00000025708	DBR1	99	56.443	Cebus_capucinus
ENSHCOG00000004179	dbr1	79	64.665	ENSCATG00000032054	DBR1	99	56.810	Cercocebus_atys
ENSHCOG00000004179	dbr1	98	55.797	ENSCLAG00000001800	DBR1	99	55.914	Chinchilla_lanigera
ENSHCOG00000004179	dbr1	79	64.434	ENSCSAG00000010977	DBR1	99	56.452	Chlorocebus_sabaeus
ENSHCOG00000004179	dbr1	89	68.627	ENSCHOG00000000730	DBR1	89	68.627	Choloepus_hoffmanni
ENSHCOG00000004179	dbr1	99	57.065	ENSCPBG00000007633	DBR1	90	55.185	Chrysemys_picta_bellii
ENSHCOG00000004179	dbr1	80	55.281	ENSCING00000011388	-	97	55.530	Ciona_intestinalis
ENSHCOG00000004179	dbr1	70	58.730	ENSCSAVG00000007545	-	100	58.730	Ciona_savignyi
ENSHCOG00000004179	dbr1	99	56.569	ENSCANG00000024237	DBR1	99	56.600	Colobus_angolensis_palliatus
ENSHCOG00000004179	dbr1	100	56.128	ENSCGRG00001018497	Dbr1	100	56.128	Cricetulus_griseus_chok1gshd
ENSHCOG00000004179	dbr1	99	51.246	ENSCGRG00000005958	Dbr1	99	51.246	Cricetulus_griseus_crigri
ENSHCOG00000004179	dbr1	99	71.377	ENSCSEG00000002813	dbr1	99	71.735	Cynoglossus_semilaevis
ENSHCOG00000004179	dbr1	99	71.325	ENSCVAG00000019969	dbr1	99	71.325	Cyprinodon_variegatus
ENSHCOG00000004179	dbr1	99	63.287	ENSDARG00000056923	dbr1	99	64.273	Danio_rerio
ENSHCOG00000004179	dbr1	98	56.777	ENSDNOG00000043630	DBR1	99	57.143	Dasypus_novemcinctus
ENSHCOG00000004179	dbr1	70	53.828	FBgn0035838	ldbr	78	54.177	Drosophila_melanogaster
ENSHCOG00000004179	dbr1	59	81.343	ENSETEG00000011830	DBR1	79	81.343	Echinops_telfairi
ENSHCOG00000004179	dbr1	79	53.241	ENSEBUG00000007494	dbr1	69	57.069	Eptatretus_burgeri
ENSHCOG00000004179	dbr1	98	56.912	ENSEASG00005003788	DBR1	99	57.016	Equus_asinus_asinus
ENSHCOG00000004179	dbr1	98	57.092	ENSECAG00000013920	DBR1	99	57.194	Equus_caballus
ENSHCOG00000004179	dbr1	99	49.180	ENSEEUG00000007059	DBR1	99	49.180	Erinaceus_europaeus
ENSHCOG00000004179	dbr1	100	66.963	ENSELUG00000005587	dbr1	100	68.694	Esox_lucius
ENSHCOG00000004179	dbr1	98	56.373	ENSFCAG00000002229	DBR1	99	56.483	Felis_catus
ENSHCOG00000004179	dbr1	99	57.505	ENSFALG00000013467	DBR1	85	55.342	Ficedula_albicollis
ENSHCOG00000004179	dbr1	79	64.203	ENSFDAG00000009524	DBR1	99	56.102	Fukomys_damarensis
ENSHCOG00000004179	dbr1	99	72.744	ENSFHEG00000001743	dbr1	99	72.744	Fundulus_heteroclitus
ENSHCOG00000004179	dbr1	99	69.203	ENSGMOG00000006925	dbr1	99	69.203	Gadus_morhua
ENSHCOG00000004179	dbr1	99	50.906	ENSGALG00000043797	DBR1	99	48.325	Gallus_gallus
ENSHCOG00000004179	dbr1	99	74.088	ENSGAFG00000001046	dbr1	99	74.088	Gambusia_affinis
ENSHCOG00000004179	dbr1	99	72.793	ENSGACG00000009122	dbr1	100	71.892	Gasterosteus_aculeatus
ENSHCOG00000004179	dbr1	99	57.246	ENSGAGG00000001244	DBR1	100	54.577	Gopherus_agassizii
ENSHCOG00000004179	dbr1	79	59.122	ENSGGOG00000004564	DBR1	99	51.351	Gorilla_gorilla
ENSHCOG00000004179	dbr1	99	73.646	ENSHBUG00000000882	dbr1	99	73.646	Haplochromis_burtoni
ENSHCOG00000004179	dbr1	98	55.882	ENSHGLG00000014529	Dbr1	99	55.616	Heterocephalus_glaber_female
ENSHCOG00000004179	dbr1	98	55.882	ENSHGLG00100013202	Dbr1	99	55.616	Heterocephalus_glaber_male
ENSHCOG00000004179	dbr1	99	65.217	ENSIPUG00000023749	dbr1	99	66.261	Ictalurus_punctatus
ENSHCOG00000004179	dbr1	99	54.874	ENSSTOG00000007122	DBR1	99	54.821	Ictidomys_tridecemlineatus
ENSHCOG00000004179	dbr1	100	56.584	ENSJJAG00000017080	Dbr1	100	56.364	Jaculus_jaculus
ENSHCOG00000004179	dbr1	99	71.688	ENSKMAG00000004869	dbr1	99	72.212	Kryptolebias_marmoratus
ENSHCOG00000004179	dbr1	100	70.922	ENSLBEG00000021307	dbr1	99	72.743	Labrus_bergylta
ENSHCOG00000004179	dbr1	99	60.364	ENSLACG00000005547	DBR1	99	59.818	Latimeria_chalumnae
ENSHCOG00000004179	dbr1	100	66.018	ENSLOCG00000004160	dbr1	99	66.432	Lepisosteus_oculatus
ENSHCOG00000004179	dbr1	99	56.216	ENSLAFG00000005827	DBR1	99	56.036	Loxodonta_africana
ENSHCOG00000004179	dbr1	79	64.665	ENSMFAG00000043642	DBR1	99	56.810	Macaca_fascicularis
ENSHCOG00000004179	dbr1	79	64.665	ENSMMUG00000021284	DBR1	99	56.810	Macaca_mulatta
ENSHCOG00000004179	dbr1	79	64.665	ENSMNEG00000041740	DBR1	99	56.810	Macaca_nemestrina
ENSHCOG00000004179	dbr1	70	49.235	ENSMLEG00000034542	DBR1	89	70.051	Mandrillus_leucophaeus
ENSHCOG00000004179	dbr1	100	71.936	ENSMAMG00000012205	dbr1	99	72.114	Mastacembelus_armatus
ENSHCOG00000004179	dbr1	99	73.466	ENSMZEG00005021338	dbr1	99	73.466	Maylandia_zebra
ENSHCOG00000004179	dbr1	80	52.822	ENSMGAG00000002142	DBR1	99	50.108	Meleagris_gallopavo
ENSHCOG00000004179	dbr1	100	56.351	ENSMAUG00000010037	Dbr1	100	56.351	Mesocricetus_auratus
ENSHCOG00000004179	dbr1	98	56.806	ENSMICG00000049533	DBR1	99	56.786	Microcebus_murinus
ENSHCOG00000004179	dbr1	100	56.475	ENSMOCG00000018746	Dbr1	100	54.856	Microtus_ochrogaster
ENSHCOG00000004179	dbr1	100	71.403	ENSMMOG00000000719	dbr1	99	72.291	Mola_mola
ENSHCOG00000004179	dbr1	99	56.679	ENSMODG00000018554	DBR1	99	56.624	Monodelphis_domestica
ENSHCOG00000004179	dbr1	99	70.693	ENSMALG00000022283	dbr1	97	71.403	Monopterus_albus
ENSHCOG00000004179	dbr1	98	55.818	MGP_CAROLIEiJ_G0032564	Dbr1	95	68.354	Mus_caroli
ENSHCOG00000004179	dbr1	99	56.194	ENSMUSG00000032469	Dbr1	95	68.354	Mus_musculus
ENSHCOG00000004179	dbr1	99	55.635	MGP_PahariEiJ_G0015433	Dbr1	95	68.354	Mus_pahari
ENSHCOG00000004179	dbr1	99	55.735	MGP_SPRETEiJ_G0033708	Dbr1	95	68.354	Mus_spretus
ENSHCOG00000004179	dbr1	98	56.667	ENSMPUG00000009230	DBR1	99	56.777	Mustela_putorius_furo
ENSHCOG00000004179	dbr1	98	56.022	ENSMLUG00000026117	DBR1	99	56.261	Myotis_lucifugus
ENSHCOG00000004179	dbr1	99	55.476	ENSNGAG00000003518	Dbr1	99	55.476	Nannospalax_galili
ENSHCOG00000004179	dbr1	99	73.827	ENSNBRG00000016318	dbr1	99	73.827	Neolamprologus_brichardi
ENSHCOG00000004179	dbr1	99	55.920	ENSNLEG00000032263	DBR1	98	56.014	Nomascus_leucogenys
ENSHCOG00000004179	dbr1	99	56.831	ENSMEUG00000009188	DBR1	99	56.777	Notamacropus_eugenii
ENSHCOG00000004179	dbr1	93	48.521	ENSOPRG00000016510	DBR1	99	47.710	Ochotona_princeps
ENSHCOG00000004179	dbr1	99	56.227	ENSODEG00000018178	DBR1	99	55.861	Octodon_degus
ENSHCOG00000004179	dbr1	99	73.333	ENSONIG00000013801	dbr1	99	73.514	Oreochromis_niloticus
ENSHCOG00000004179	dbr1	88	56.212	ENSOANG00000007783	DBR1	99	54.059	Ornithorhynchus_anatinus
ENSHCOG00000004179	dbr1	93	56.783	ENSOCUG00000015129	DBR1	89	56.622	Oryctolagus_cuniculus
ENSHCOG00000004179	dbr1	99	71.243	ENSORLG00015001112	dbr1	99	71.058	Oryzias_latipes_hsok
ENSHCOG00000004179	dbr1	99	71.349	ENSOMEG00000000857	dbr1	99	71.111	Oryzias_melastigma
ENSHCOG00000004179	dbr1	98	56.307	ENSOGAG00000033095	DBR1	99	56.452	Otolemur_garnettii
ENSHCOG00000004179	dbr1	99	54.025	ENSOARG00000007589	DBR1	99	54.025	Ovis_aries
ENSHCOG00000004179	dbr1	79	64.665	ENSPPAG00000031137	DBR1	99	56.172	Pan_paniscus
ENSHCOG00000004179	dbr1	98	56.373	ENSPPRG00000013629	DBR1	99	56.483	Panthera_pardus
ENSHCOG00000004179	dbr1	96	55.780	ENSPTIG00000012674	DBR1	97	55.898	Panthera_tigris_altaica
ENSHCOG00000004179	dbr1	79	64.434	ENSPTRG00000015441	DBR1	99	56.172	Pan_troglodytes
ENSHCOG00000004179	dbr1	79	64.434	ENSPANG00000012664	DBR1	99	56.631	Papio_anubis
ENSHCOG00000004179	dbr1	100	66.314	ENSPKIG00000000310	dbr1	99	65.256	Paramormyrops_kingsleyae
ENSHCOG00000004179	dbr1	87	55.741	ENSPSIG00000015486	DBR1	99	55.417	Pelodiscus_sinensis
ENSHCOG00000004179	dbr1	98	55.054	ENSPEMG00000020602	Dbr1	99	54.529	Peromyscus_maniculatus_bairdii
ENSHCOG00000004179	dbr1	70	60.053	ENSPMAG00000008620	dbr1	99	60.053	Petromyzon_marinus
ENSHCOG00000004179	dbr1	99	56.284	ENSPCIG00000006494	DBR1	99	56.410	Phascolarctos_cinereus
ENSHCOG00000004179	dbr1	99	74.223	ENSPLAG00000011665	dbr1	99	74.223	Poecilia_latipinna
ENSHCOG00000004179	dbr1	69	65.969	ENSPLAG00000002421	-	99	66.492	Poecilia_latipinna
ENSHCOG00000004179	dbr1	99	74.771	ENSPMEG00000010080	dbr1	99	74.771	Poecilia_mexicana
ENSHCOG00000004179	dbr1	70	66.667	ENSPMEG00000020884	-	94	66.667	Poecilia_mexicana
ENSHCOG00000004179	dbr1	99	74.954	ENSPREG00000020157	dbr1	99	74.954	Poecilia_reticulata
ENSHCOG00000004179	dbr1	99	56.239	ENSPPYG00000014139	DBR1	99	56.577	Pongo_abelii
ENSHCOG00000004179	dbr1	71	65.979	ENSPCAG00000012956	DBR1	99	65.979	Procavia_capensis
ENSHCOG00000004179	dbr1	79	65.358	ENSPCOG00000016894	DBR1	99	56.831	Propithecus_coquereli
ENSHCOG00000004179	dbr1	98	48.435	ENSPVAG00000007713	DBR1	99	48.634	Pteropus_vampyrus
ENSHCOG00000004179	dbr1	99	73.694	ENSPNYG00000015453	dbr1	99	73.694	Pundamilia_nyererei
ENSHCOG00000004179	dbr1	99	66.549	ENSPNAG00000025595	dbr1	99	67.254	Pygocentrus_nattereri
ENSHCOG00000004179	dbr1	99	54.464	ENSRNOG00000014588	Dbr1	99	54.286	Rattus_norvegicus
ENSHCOG00000004179	dbr1	79	64.203	ENSRBIG00000045002	DBR1	99	56.036	Rhinopithecus_bieti
ENSHCOG00000004179	dbr1	79	64.203	ENSRROG00000044819	DBR1	99	56.351	Rhinopithecus_roxellana
ENSHCOG00000004179	dbr1	55	37.360	YKL149C	DBR1	87	37.640	Saccharomyces_cerevisiae
ENSHCOG00000004179	dbr1	98	57.455	ENSSBOG00000032048	DBR1	99	56.679	Saimiri_boliviensis_boliviensis
ENSHCOG00000004179	dbr1	99	56.044	ENSSHAG00000006752	DBR1	99	55.393	Sarcophilus_harrisii
ENSHCOG00000004179	dbr1	99	64.855	ENSSFOG00015011410	dbr1	99	64.130	Scleropages_formosus
ENSHCOG00000004179	dbr1	99	72.064	ENSSMAG00000016078	dbr1	99	72.954	Scophthalmus_maximus
ENSHCOG00000004179	dbr1	99	72.935	ENSSDUG00000017849	dbr1	99	73.145	Seriola_dumerili
ENSHCOG00000004179	dbr1	99	73.016	ENSSLDG00000019891	dbr1	99	74.153	Seriola_lalandi_dorsalis
ENSHCOG00000004179	dbr1	52	71.622	ENSSARG00000003148	-	74	71.622	Sorex_araneus
ENSHCOG00000004179	dbr1	83	58.499	ENSSARG00000009558	-	79	60.233	Sorex_araneus
ENSHCOG00000004179	dbr1	89	53.512	ENSSPUG00000004724	DBR1	92	53.512	Sphenodon_punctatus
ENSHCOG00000004179	dbr1	99	74.729	ENSSPAG00000016892	dbr1	99	74.275	Stegastes_partitus
ENSHCOG00000004179	dbr1	99	56.058	ENSSSCG00000031098	DBR1	99	56.058	Sus_scrofa
ENSHCOG00000004179	dbr1	95	56.439	ENSTGUG00000007073	DBR1	98	53.931	Taeniopygia_guttata
ENSHCOG00000004179	dbr1	100	71.043	ENSTRUG00000021594	dbr1	98	71.763	Takifugu_rubripes
ENSHCOG00000004179	dbr1	100	71.532	ENSTNIG00000006710	dbr1	99	72.072	Tetraodon_nigroviridis
ENSHCOG00000004179	dbr1	99	56.838	ENSTTRG00000004020	DBR1	99	56.483	Tursiops_truncatus
ENSHCOG00000004179	dbr1	99	55.872	ENSUAMG00000004639	DBR1	99	55.872	Ursus_americanus
ENSHCOG00000004179	dbr1	98	55.755	ENSUMAG00000015012	DBR1	99	55.872	Ursus_maritimus
ENSHCOG00000004179	dbr1	99	49.731	ENSVPAG00000011711	DBR1	99	50.987	Vicugna_pacos
ENSHCOG00000004179	dbr1	79	64.665	ENSVVUG00000026604	DBR1	99	56.490	Vulpes_vulpes
ENSHCOG00000004179	dbr1	100	58.425	ENSXETG00000027491	dbr1	100	58.425	Xenopus_tropicalis
ENSHCOG00000004179	dbr1	99	74.771	ENSXCOG00000018078	dbr1	99	74.771	Xiphophorus_couchianus
ENSHCOG00000004179	dbr1	99	74.771	ENSXMAG00000007311	dbr1	99	74.771	Xiphophorus_maculatus