EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000004206 (Gene tree)
Gene ID: 109517027
Gene Symbol: cwc22
Alias: fb13g08|fi16b02|wu:fb13g08|wu:fi16b02|zgc:153452
Full Name: CWC22 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 11147 bases
Position: chrKV879992.1:97590-108736
Accession: 109517027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019093	MA3	PF02847.17	8.5e-23	1	1
ENSHCOP00000019116	MA3	PF02847.17	8.9e-23	1	1
ENSHCOP00000019093	MIF4G	PF02854.19	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009577	-	3323	XM_019871912	ENSHCOP00000019116	865 (aa)	XP_019727471	-
ENSHCOT00000009592	-	2690	-	ENSHCOP00000019093	838 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000004206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004206	cwc22	74	76.518	ENSG00000163510	CWC22	75	82.616	Homo_sapiens
ENSHCOG00000004206	cwc22	75	79.091	ENSAPOG00000004200	cwc22	76	77.280	Acanthochromis_polyacanthus
ENSHCOG00000004206	cwc22	67	82.509	ENSAMEG00000011004	CWC22	62	83.154	Ailuropoda_melanoleuca
ENSHCOG00000004206	cwc22	69	90.609	ENSACIG00000020055	cwc22	70	91.592	Amphilophus_citrinellus
ENSHCOG00000004206	cwc22	68	90.210	ENSAPEG00000002673	cwc22	81	72.932	Amphiprion_percula
ENSHCOG00000004206	cwc22	73	75.196	ENSACAG00000009438	CWC22	62	81.555	Anolis_carolinensis
ENSHCOG00000004206	cwc22	67	81.162	ENSANAG00000028324	CWC22	62	82.258	Aotus_nancymaae
ENSHCOG00000004206	cwc22	74	81.385	ENSACLG00000025447	cwc22	90	91.549	Astatotilapia_calliptera
ENSHCOG00000004206	cwc22	67	82.155	ENSBTAG00000021726	CWC22	62	82.796	Bos_taurus
ENSHCOG00000004206	cwc22	63	54.869	WBGene00002957	let-858	60	54.851	Caenorhabditis_elegans
ENSHCOG00000004206	cwc22	67	82.570	ENSCAFG00000014160	CWC22	61	83.273	Canis_familiaris
ENSHCOG00000004206	cwc22	67	82.509	ENSCAFG00020007223	CWC22	68	86.928	Canis_lupus_dingo
ENSHCOG00000004206	cwc22	67	81.979	ENSCHIG00000017150	CWC22	62	82.796	Capra_hircus
ENSHCOG00000004206	cwc22	67	82.042	ENSTSYG00000000218	-	61	83.032	Carlito_syrichta
ENSHCOG00000004206	cwc22	84	65.358	ENSTSYG00000026635	-	62	74.229	Carlito_syrichta
ENSHCOG00000004206	cwc22	71	71.476	ENSTSYG00000035591	-	68	75.180	Carlito_syrichta
ENSHCOG00000004206	cwc22	69	71.039	ENSTSYG00000028686	-	64	71.841	Carlito_syrichta
ENSHCOG00000004206	cwc22	79	69.086	ENSCAPG00000002064	CWC22	65	77.117	Cavia_aperea
ENSHCOG00000004206	cwc22	78	74.009	ENSCPOG00000007492	CWC22	62	82.703	Cavia_porcellus
ENSHCOG00000004206	cwc22	67	76.232	ENSCCAG00000021239	CWC22	61	77.240	Cebus_capucinus
ENSHCOG00000004206	cwc22	67	81.514	ENSCATG00000035788	CWC22	62	82.616	Cercocebus_atys
ENSHCOG00000004206	cwc22	67	82.155	ENSCLAG00000011118	CWC22	62	82.883	Chinchilla_lanigera
ENSHCOG00000004206	cwc22	67	81.514	ENSCSAG00000012925	CWC22	62	82.616	Chlorocebus_sabaeus
ENSHCOG00000004206	cwc22	67	73.721	ENSCHOG00000006362	CWC22	62	74.014	Choloepus_hoffmanni
ENSHCOG00000004206	cwc22	76	75.387	ENSCPBG00000001765	CWC22	61	84.489	Chrysemys_picta_bellii
ENSHCOG00000004206	cwc22	66	66.306	ENSCING00000008865	-	70	67.276	Ciona_intestinalis
ENSHCOG00000004206	cwc22	64	66.419	ENSCSAVG00000003537	-	78	72.683	Ciona_savignyi
ENSHCOG00000004206	cwc22	67	81.514	ENSCANG00000013762	CWC22	62	82.616	Colobus_angolensis_palliatus
ENSHCOG00000004206	cwc22	70	81.218	ENSCGRG00001017005	-	81	81.132	Cricetulus_griseus_chok1gshd
ENSHCOG00000004206	cwc22	67	81.834	ENSCGRG00000001934	-	64	80.034	Cricetulus_griseus_crigri
ENSHCOG00000004206	cwc22	76	72.879	ENSCSEG00000005257	cwc22	61	80.071	Cynoglossus_semilaevis
ENSHCOG00000004206	cwc22	84	89.242	ENSCVAG00000009836	cwc22	56	90.391	Cyprinodon_variegatus
ENSHCOG00000004206	cwc22	68	84.991	ENSDARG00000014008	cwc22	68	77.536	Danio_rerio
ENSHCOG00000004206	cwc22	71	62.167	ENSDNOG00000032640	-	78	64.093	Dasypus_novemcinctus
ENSHCOG00000004206	cwc22	67	81.979	ENSDNOG00000003020	-	61	83.213	Dasypus_novemcinctus
ENSHCOG00000004206	cwc22	66	82.437	ENSDORG00000011483	-	61	82.226	Dipodomys_ordii
ENSHCOG00000004206	cwc22	67	70.723	ENSETEG00000013355	CWC22	77	71.532	Echinops_telfairi
ENSHCOG00000004206	cwc22	89	69.301	ENSEASG00005022287	CWC22	61	82.765	Equus_asinus_asinus
ENSHCOG00000004206	cwc22	87	70.252	ENSECAG00000010769	CWC22	61	82.765	Equus_caballus
ENSHCOG00000004206	cwc22	63	76.071	ENSEEUG00000005336	CWC22	54	77.061	Erinaceus_europaeus
ENSHCOG00000004206	cwc22	81	75.818	ENSELUG00000010536	cwc22	90	81.528	Esox_lucius
ENSHCOG00000004206	cwc22	67	82.332	ENSFCAG00000018982	CWC22	61	83.485	Felis_catus
ENSHCOG00000004206	cwc22	87	69.554	ENSFALG00000003495	CWC22	60	82.482	Ficedula_albicollis
ENSHCOG00000004206	cwc22	68	81.756	ENSFDAG00000010857	CWC22	62	83.183	Fukomys_damarensis
ENSHCOG00000004206	cwc22	65	90.809	ENSFHEG00000009620	cwc22	72	77.652	Fundulus_heteroclitus
ENSHCOG00000004206	cwc22	71	82.696	ENSGMOG00000009084	cwc22	89	85.740	Gadus_morhua
ENSHCOG00000004206	cwc22	80	73.792	ENSGALG00000009001	CWC22	59	82.633	Gallus_gallus
ENSHCOG00000004206	cwc22	65	91.225	ENSGAFG00000021155	cwc22	73	84.959	Gambusia_affinis
ENSHCOG00000004206	cwc22	68	89.161	ENSGACG00000002071	cwc22	67	90.235	Gasterosteus_aculeatus
ENSHCOG00000004206	cwc22	68	81.834	ENSGAGG00000013471	CWC22	61	84.854	Gopherus_agassizii
ENSHCOG00000004206	cwc22	67	81.514	ENSGGOG00000012484	CWC22	61	82.616	Gorilla_gorilla
ENSHCOG00000004206	cwc22	87	70.785	ENSHBUG00000010504	cwc22	61	90.824	Haplochromis_burtoni
ENSHCOG00000004206	cwc22	80	72.821	ENSHGLG00000005692	CWC22	62	82.883	Heterocephalus_glaber_female
ENSHCOG00000004206	cwc22	68	81.456	ENSHGLG00100016497	CWC22	79	82.625	Heterocephalus_glaber_male
ENSHCOG00000004206	cwc22	80	75.070	ENSIPUG00000005831	cwc22	70	75.375	Ictalurus_punctatus
ENSHCOG00000004206	cwc22	67	81.152	ENSSTOG00000009788	CWC22	61	82.523	Ictidomys_tridecemlineatus
ENSHCOG00000004206	cwc22	68	82.312	ENSJJAG00000017012	-	62	82.944	Jaculus_jaculus
ENSHCOG00000004206	cwc22	97	81.711	ENSKMAG00000005228	cwc22	56	90.778	Kryptolebias_marmoratus
ENSHCOG00000004206	cwc22	68	87.324	ENSLBEG00000020518	cwc22	61	87.621	Labrus_bergylta
ENSHCOG00000004206	cwc22	68	85.366	ENSLOCG00000006456	cwc22	77	85.420	Lepisosteus_oculatus
ENSHCOG00000004206	cwc22	67	82.363	ENSLAFG00000014802	CWC22	62	82.060	Loxodonta_africana
ENSHCOG00000004206	cwc22	67	81.802	ENSMFAG00000000590	CWC22	65	82.616	Macaca_fascicularis
ENSHCOG00000004206	cwc22	71	78.631	ENSMMUG00000020642	CWC22	64	82.616	Macaca_mulatta
ENSHCOG00000004206	cwc22	67	81.802	ENSMNEG00000034567	CWC22	62	82.616	Macaca_nemestrina
ENSHCOG00000004206	cwc22	67	81.514	ENSMLEG00000042344	CWC22	62	82.616	Mandrillus_leucophaeus
ENSHCOG00000004206	cwc22	70	87.310	ENSMAMG00000018888	cwc22	59	86.780	Mastacembelus_armatus
ENSHCOG00000004206	cwc22	81	80.987	ENSMZEG00005021449	cwc22	69	79.542	Maylandia_zebra
ENSHCOG00000004206	cwc22	80	72.096	ENSMGAG00000009220	CWC22	62	82.162	Meleagris_gallopavo
ENSHCOG00000004206	cwc22	56	83.617	ENSMAUG00000016154	-	62	82.729	Mesocricetus_auratus
ENSHCOG00000004206	cwc22	85	74.702	ENSMICG00000016919	CWC22	76	77.796	Microcebus_murinus
ENSHCOG00000004206	cwc22	74	75.883	ENSMMOG00000019720	cwc22	79	84.810	Mola_mola
ENSHCOG00000004206	cwc22	64	77.528	ENSMODG00000003711	-	97	76.779	Monodelphis_domestica
ENSHCOG00000004206	cwc22	64	77.903	ENSMODG00000020117	-	97	76.866	Monodelphis_domestica
ENSHCOG00000004206	cwc22	67	81.416	ENSMODG00000010233	-	62	82.226	Monodelphis_domestica
ENSHCOG00000004206	cwc22	80	72.714	MGP_CAROLIEiJ_G0023696	-	76	82.406	Mus_caroli
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000096729	Gm13695	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	68	81.174	ENSMUSG00000027014	Cwc22	77	82.437	Mus_musculus
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000094336	Gm13693	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000079247	Gm13691	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000096337	Gm13694	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000094125	Gm13698	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000096484	Gm13696	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	80	71.388	ENSMUSG00000095824	Gm13697	80	73.152	Mus_musculus
ENSHCOG00000004206	cwc22	80	72.779	MGP_PahariEiJ_G0025147	-	76	82.616	Mus_pahari
ENSHCOG00000004206	cwc22	67	82.218	ENSMPUG00000002432	CWC22	62	83.154	Mustela_putorius_furo
ENSHCOG00000004206	cwc22	67	82.918	ENSMLUG00000013437	-	67	83.154	Myotis_lucifugus
ENSHCOG00000004206	cwc22	80	71.261	ENSMLUG00000024966	-	70	81.004	Myotis_lucifugus
ENSHCOG00000004206	cwc22	89	73.401	ENSNGAG00000013881	-	78	80.888	Nannospalax_galili
ENSHCOG00000004206	cwc22	68	81.404	ENSNLEG00000006248	CWC22	61	82.437	Nomascus_leucogenys
ENSHCOG00000004206	cwc22	66	75.714	ENSMEUG00000011026	CWC22	95	77.903	Notamacropus_eugenii
ENSHCOG00000004206	cwc22	69	70.785	ENSOPRG00000007844	CWC22	58	82.303	Ochotona_princeps
ENSHCOG00000004206	cwc22	61	82.422	ENSODEG00000007673	CWC22	86	79.963	Octodon_degus
ENSHCOG00000004206	cwc22	56	78.326	ENSODEG00000005934	-	72	77.849	Octodon_degus
ENSHCOG00000004206	cwc22	76	76.672	ENSOANG00000008649	CWC22	68	83.077	Ornithorhynchus_anatinus
ENSHCOG00000004206	cwc22	80	76.848	ENSORLG00000010538	cwc22	74	79.023	Oryzias_latipes
ENSHCOG00000004206	cwc22	80	76.848	ENSORLG00020015117	cwc22	74	79.023	Oryzias_latipes_hni
ENSHCOG00000004206	cwc22	80	77.451	ENSORLG00015018073	cwc22	59	89.873	Oryzias_latipes_hsok
ENSHCOG00000004206	cwc22	69	87.457	ENSOMEG00000015199	cwc22	78	76.027	Oryzias_melastigma
ENSHCOG00000004206	cwc22	67	81.514	ENSOGAG00000015287	CWC22	61	82.437	Otolemur_garnettii
ENSHCOG00000004206	cwc22	67	81.979	ENSOARG00000016905	CWC22	62	82.616	Ovis_aries
ENSHCOG00000004206	cwc22	67	81.338	ENSPPAG00000027833	CWC22	62	82.437	Pan_paniscus
ENSHCOG00000004206	cwc22	67	82.332	ENSPPRG00000001389	CWC22	61	83.485	Panthera_pardus
ENSHCOG00000004206	cwc22	67	82.332	ENSPTIG00000019139	CWC22	61	83.485	Panthera_tigris_altaica
ENSHCOG00000004206	cwc22	67	81.514	ENSPTRG00000012698	CWC22	61	82.616	Pan_troglodytes
ENSHCOG00000004206	cwc22	67	81.514	ENSPANG00000018976	CWC22	62	82.616	Papio_anubis
ENSHCOG00000004206	cwc22	68	84.790	ENSPKIG00000021346	cwc22	64	83.784	Paramormyrops_kingsleyae
ENSHCOG00000004206	cwc22	74	77.080	ENSPSIG00000008632	CWC22	61	84.489	Pelodiscus_sinensis
ENSHCOG00000004206	cwc22	68	83.569	ENSPMGG00000020129	cwc22	57	84.755	Periophthalmus_magnuspinnatus
ENSHCOG00000004206	cwc22	73	73.217	ENSPEMG00000023936	-	80	77.857	Peromyscus_maniculatus_bairdii
ENSHCOG00000004206	cwc22	80	68.428	ENSPMAG00000005914	cwc22	78	78.510	Petromyzon_marinus
ENSHCOG00000004206	cwc22	79	73.284	ENSPCIG00000009903	-	77	82.047	Phascolarctos_cinereus
ENSHCOG00000004206	cwc22	67	91.039	ENSPFOG00000015025	cwc22	80	83.553	Poecilia_formosa
ENSHCOG00000004206	cwc22	66	90.975	ENSPLAG00000021405	cwc22	55	90.958	Poecilia_latipinna
ENSHCOG00000004206	cwc22	67	90.860	ENSPMEG00000007850	cwc22	55	90.597	Poecilia_mexicana
ENSHCOG00000004206	cwc22	66	85.481	ENSPREG00000004312	cwc22	74	78.247	Poecilia_reticulata
ENSHCOG00000004206	cwc22	67	81.514	ENSPPYG00000012986	CWC22	61	82.585	Pongo_abelii
ENSHCOG00000004206	cwc22	68	79.620	ENSPCAG00000011882	CWC22	62	80.790	Procavia_capensis
ENSHCOG00000004206	cwc22	59	79.753	ENSPCOG00000010195	CWC22	58	83.333	Propithecus_coquereli
ENSHCOG00000004206	cwc22	67	82.124	ENSPVAG00000011497	CWC22	61	82.765	Pteropus_vampyrus
ENSHCOG00000004206	cwc22	74	79.294	ENSPNYG00000010435	cwc22	95	88.380	Pundamilia_nyererei
ENSHCOG00000004206	cwc22	80	69.819	ENSRNOG00000012651	Cwc22	66	75.462	Rattus_norvegicus
ENSHCOG00000004206	cwc22	68	77.470	ENSRNOG00000038322	LOC500684	61	79.310	Rattus_norvegicus
ENSHCOG00000004206	cwc22	67	78.799	ENSRBIG00000036751	CWC22	61	79.749	Rhinopithecus_bieti
ENSHCOG00000004206	cwc22	67	81.514	ENSRROG00000037520	CWC22	62	82.616	Rhinopithecus_roxellana
ENSHCOG00000004206	cwc22	59	30.140	YGR278W	-	82	30.140	Saccharomyces_cerevisiae
ENSHCOG00000004206	cwc22	67	78.169	ENSSBOG00000021683	CWC22	61	79.391	Saimiri_boliviensis_boliviensis
ENSHCOG00000004206	cwc22	68	80.584	ENSSHAG00000016596	-	65	81.818	Sarcophilus_harrisii
ENSHCOG00000004206	cwc22	72	66.340	ENSSHAG00000004040	-	76	70.803	Sarcophilus_harrisii
ENSHCOG00000004206	cwc22	68	77.504	ENSSFOG00015010559	cwc22	62	85.323	Scleropages_formosus
ENSHCOG00000004206	cwc22	68	86.713	ENSSMAG00000004724	cwc22	80	71.792	Scophthalmus_maximus
ENSHCOG00000004206	cwc22	68	90.210	ENSSDUG00000010656	cwc22	78	73.806	Seriola_dumerili
ENSHCOG00000004206	cwc22	67	90.519	ENSSLDG00000023157	cwc22	92	84.317	Seriola_lalandi_dorsalis
ENSHCOG00000004206	cwc22	74	73.175	ENSSPUG00000006395	CWC22	63	80.328	Sphenodon_punctatus
ENSHCOG00000004206	cwc22	68	90.210	ENSSPAG00000008746	cwc22	78	74.036	Stegastes_partitus
ENSHCOG00000004206	cwc22	67	82.155	ENSSSCG00000016008	CWC22	61	82.852	Sus_scrofa
ENSHCOG00000004206	cwc22	75	76.266	ENSTGUG00000009340	-	64	82.226	Taeniopygia_guttata
ENSHCOG00000004206	cwc22	70	85.619	ENSTRUG00000014411	cwc22	71	77.909	Takifugu_rubripes
ENSHCOG00000004206	cwc22	66	85.080	ENSTNIG00000005074	cwc22	74	85.435	Tetraodon_nigroviridis
ENSHCOG00000004206	cwc22	68	63.495	ENSTBEG00000014539	CWC22	61	64.801	Tupaia_belangeri
ENSHCOG00000004206	cwc22	71	75.510	ENSTTRG00000012142	CWC22	62	82.437	Tursiops_truncatus
ENSHCOG00000004206	cwc22	67	82.509	ENSUAMG00000010342	CWC22	59	87.171	Ursus_americanus
ENSHCOG00000004206	cwc22	67	82.509	ENSUMAG00000016730	CWC22	61	83.154	Ursus_maritimus
ENSHCOG00000004206	cwc22	72	74.419	ENSVPAG00000008565	CWC22	61	82.406	Vicugna_pacos
ENSHCOG00000004206	cwc22	67	82.509	ENSVVUG00000009738	CWC22	61	83.213	Vulpes_vulpes
ENSHCOG00000004206	cwc22	90	69.089	ENSXETG00000014099	cwc22	71	83.122	Xenopus_tropicalis