EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000004292 (Gene tree)
Gene ID: 109518433
Gene Symbol: nmd3
Alias: nmd3l|zgc:113103
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 8917 bases
Position: chrKV880049.1:67427-76343
Accession: 109518433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019155	NMD3	PF04981.13	3.2e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009443	-	1867	XM_019874248	ENSHCOP00000019155	546 (aa)	XP_019729807	UPI00094F0602

Gene Model

Click here to download ENSHCOG00000004292's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03008	Ribosome biogenesis in eukaryotes	KEGG
hcq03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004292	nmd3	92	77.137	ENSG00000169251	NMD3	100	78.899	Homo_sapiens
ENSHCOG00000004292	nmd3	92	91.633	ENSAPOG00000022912	nmd3	99	91.633	Acanthochromis_polyacanthus
ENSHCOG00000004292	nmd3	92	77.579	ENSAMEG00000001584	NMD3	99	77.579	Ailuropoda_melanoleuca
ENSHCOG00000004292	nmd3	92	86.056	ENSACIG00000015196	nmd3	99	86.056	Amphilophus_citrinellus
ENSHCOG00000004292	nmd3	92	91.833	ENSAOCG00000009086	nmd3	99	91.833	Amphiprion_ocellaris
ENSHCOG00000004292	nmd3	92	91.833	ENSAPEG00000000329	nmd3	99	91.833	Amphiprion_percula
ENSHCOG00000004292	nmd3	92	91.633	ENSATEG00000014351	nmd3	99	91.633	Anabas_testudineus
ENSHCOG00000004292	nmd3	92	75.348	ENSAPLG00000014786	NMD3	99	75.348	Anas_platyrhynchos
ENSHCOG00000004292	nmd3	92	80.119	ENSACAG00000007349	NMD3	99	80.119	Anolis_carolinensis
ENSHCOG00000004292	nmd3	92	76.190	ENSANAG00000026434	NMD3	99	76.954	Aotus_nancymaae
ENSHCOG00000004292	nmd3	92	91.633	ENSACLG00000015520	nmd3	99	91.633	Astatotilapia_calliptera
ENSHCOG00000004292	nmd3	92	87.849	ENSAMXG00000014415	nmd3	99	87.849	Astyanax_mexicanus
ENSHCOG00000004292	nmd3	92	76.740	ENSBTAG00000016228	NMD3	99	76.740	Bos_taurus
ENSHCOG00000004292	nmd3	90	49.497	WBGene00012030	T25G3.3	96	49.497	Caenorhabditis_elegans
ENSHCOG00000004292	nmd3	92	76.984	ENSCJAG00000002900	NMD3	97	77.711	Callithrix_jacchus
ENSHCOG00000004292	nmd3	91	77.510	ENSCAFG00000014352	NMD3	97	77.510	Canis_familiaris
ENSHCOG00000004292	nmd3	92	77.137	ENSCAFG00020021145	NMD3	99	77.137	Canis_lupus_dingo
ENSHCOG00000004292	nmd3	92	76.541	ENSCHIG00000016015	NMD3	99	76.861	Capra_hircus
ENSHCOG00000004292	nmd3	92	77.137	ENSTSYG00000002155	NMD3	99	77.137	Carlito_syrichta
ENSHCOG00000004292	nmd3	73	76.500	ENSCAPG00000017861	NMD3	93	76.500	Cavia_aperea
ENSHCOG00000004292	nmd3	80	76.659	ENSCPOG00000005953	NMD3	94	76.659	Cavia_porcellus
ENSHCOG00000004292	nmd3	92	76.541	ENSCCAG00000037460	NMD3	99	76.541	Cebus_capucinus
ENSHCOG00000004292	nmd3	92	77.336	ENSCATG00000030022	NMD3	99	77.336	Cercocebus_atys
ENSHCOG00000004292	nmd3	92	77.734	ENSCLAG00000003155	NMD3	99	77.734	Chinchilla_lanigera
ENSHCOG00000004292	nmd3	92	77.535	ENSCSAG00000012333	NMD3	99	77.535	Chlorocebus_sabaeus
ENSHCOG00000004292	nmd3	73	75.265	ENSCHOG00000001240	NMD3	80	75.265	Choloepus_hoffmanni
ENSHCOG00000004292	nmd3	92	81.710	ENSCPBG00000018318	NMD3	99	82.875	Chrysemys_picta_bellii
ENSHCOG00000004292	nmd3	90	55.375	ENSCING00000002129	-	98	55.375	Ciona_intestinalis
ENSHCOG00000004292	nmd3	80	54.773	ENSCSAVG00000001120	-	97	54.773	Ciona_savignyi
ENSHCOG00000004292	nmd3	92	72.421	ENSCANG00000042939	NMD3	95	72.421	Colobus_angolensis_palliatus
ENSHCOG00000004292	nmd3	84	68.478	ENSCGRG00001001792	Nmd3	96	68.478	Cricetulus_griseus_chok1gshd
ENSHCOG00000004292	nmd3	90	77.143	ENSCGRG00000007947	Nmd3	98	77.143	Cricetulus_griseus_crigri
ENSHCOG00000004292	nmd3	92	90.837	ENSCSEG00000017954	nmd3	99	90.837	Cynoglossus_semilaevis
ENSHCOG00000004292	nmd3	92	81.873	ENSCVAG00000004672	nmd3	99	82.072	Cyprinodon_variegatus
ENSHCOG00000004292	nmd3	92	84.891	ENSDARG00000015676	nmd3	99	84.891	Danio_rerio
ENSHCOG00000004292	nmd3	92	75.149	ENSDNOG00000045222	NMD3	99	75.149	Dasypus_novemcinctus
ENSHCOG00000004292	nmd3	89	70.082	ENSDORG00000005716	Nmd3	100	69.737	Dipodomys_ordii
ENSHCOG00000004292	nmd3	93	53.216	FBgn0023542	Nmd3	98	53.216	Drosophila_melanogaster
ENSHCOG00000004292	nmd3	92	65.606	ENSETEG00000003168	NMD3	99	65.606	Echinops_telfairi
ENSHCOG00000004292	nmd3	80	58.391	ENSEBUG00000014316	nmd3	96	57.859	Eptatretus_burgeri
ENSHCOG00000004292	nmd3	92	77.137	ENSEASG00005018672	NMD3	99	77.137	Equus_asinus_asinus
ENSHCOG00000004292	nmd3	91	77.510	ENSECAG00000000188	NMD3	97	77.510	Equus_caballus
ENSHCOG00000004292	nmd3	86	56.568	ENSEEUG00000010642	-	100	56.568	Erinaceus_europaeus
ENSHCOG00000004292	nmd3	92	88.446	ENSELUG00000024123	nmd3	99	88.446	Esox_lucius
ENSHCOG00000004292	nmd3	92	77.734	ENSFCAG00000022867	NMD3	99	77.734	Felis_catus
ENSHCOG00000004292	nmd3	86	79.915	ENSFALG00000008711	NMD3	99	79.915	Ficedula_albicollis
ENSHCOG00000004292	nmd3	91	76.152	ENSFDAG00000013724	-	99	76.152	Fukomys_damarensis
ENSHCOG00000004292	nmd3	89	65.092	ENSFDAG00000012197	-	97	65.696	Fukomys_damarensis
ENSHCOG00000004292	nmd3	92	89.641	ENSFHEG00000000415	nmd3	99	89.641	Fundulus_heteroclitus
ENSHCOG00000004292	nmd3	89	85.216	ENSGMOG00000009675	nmd3	99	85.216	Gadus_morhua
ENSHCOG00000004292	nmd3	92	78.926	ENSGALG00000009533	NMD3	99	78.926	Gallus_gallus
ENSHCOG00000004292	nmd3	91	90.744	ENSGAFG00000012798	nmd3	94	90.744	Gambusia_affinis
ENSHCOG00000004292	nmd3	92	89.841	ENSGACG00000010028	nmd3	99	89.841	Gasterosteus_aculeatus
ENSHCOG00000004292	nmd3	92	81.511	ENSGAGG00000006556	NMD3	99	81.511	Gopherus_agassizii
ENSHCOG00000004292	nmd3	92	77.336	ENSGGOG00000007157	NMD3	99	77.336	Gorilla_gorilla
ENSHCOG00000004292	nmd3	92	61.630	ENSGGOG00000028590	-	99	61.630	Gorilla_gorilla
ENSHCOG00000004292	nmd3	92	91.633	ENSHBUG00000001781	nmd3	99	91.633	Haplochromis_burtoni
ENSHCOG00000004292	nmd3	92	76.740	ENSHGLG00000014451	-	99	76.740	Heterocephalus_glaber_female
ENSHCOG00000004292	nmd3	92	62.227	ENSHGLG00000010477	-	99	62.227	Heterocephalus_glaber_female
ENSHCOG00000004292	nmd3	92	76.740	ENSHGLG00100006613	-	99	76.740	Heterocephalus_glaber_male
ENSHCOG00000004292	nmd3	92	62.227	ENSHGLG00100001042	-	99	62.227	Heterocephalus_glaber_male
ENSHCOG00000004292	nmd3	92	86.056	ENSIPUG00000005073	nmd3	99	86.056	Ictalurus_punctatus
ENSHCOG00000004292	nmd3	92	77.336	ENSSTOG00000001899	NMD3	99	77.336	Ictidomys_tridecemlineatus
ENSHCOG00000004292	nmd3	89	78.074	ENSJJAG00000019759	Nmd3	99	78.074	Jaculus_jaculus
ENSHCOG00000004292	nmd3	92	90.438	ENSKMAG00000020427	nmd3	99	90.438	Kryptolebias_marmoratus
ENSHCOG00000004292	nmd3	92	89.881	ENSLBEG00000022216	nmd3	99	89.881	Labrus_bergylta
ENSHCOG00000004292	nmd3	91	77.756	ENSLACG00000005731	NMD3	99	81.007	Latimeria_chalumnae
ENSHCOG00000004292	nmd3	92	85.686	ENSLOCG00000003561	nmd3	99	85.686	Lepisosteus_oculatus
ENSHCOG00000004292	nmd3	92	74.603	ENSLAFG00000007231	NMD3	99	74.603	Loxodonta_africana
ENSHCOG00000004292	nmd3	92	77.336	ENSMFAG00000040934	NMD3	99	77.336	Macaca_fascicularis
ENSHCOG00000004292	nmd3	92	76.984	ENSMMUG00000009564	NMD3	98	76.527	Macaca_mulatta
ENSHCOG00000004292	nmd3	92	77.336	ENSMNEG00000034626	NMD3	99	77.336	Macaca_nemestrina
ENSHCOG00000004292	nmd3	81	77.878	ENSMLEG00000002741	NMD3	99	77.878	Mandrillus_leucophaeus
ENSHCOG00000004292	nmd3	92	90.040	ENSMAMG00000012427	nmd3	99	90.040	Mastacembelus_armatus
ENSHCOG00000004292	nmd3	92	91.633	ENSMZEG00005016888	nmd3	99	91.633	Maylandia_zebra
ENSHCOG00000004292	nmd3	92	78.926	ENSMGAG00000010498	NMD3	99	78.926	Meleagris_gallopavo
ENSHCOG00000004292	nmd3	92	75.944	ENSMAUG00000000633	Nmd3	99	75.944	Mesocricetus_auratus
ENSHCOG00000004292	nmd3	92	77.137	ENSMICG00000049196	NMD3	99	77.137	Microcebus_murinus
ENSHCOG00000004292	nmd3	92	74.900	ENSMOCG00000005180	Nmd3	99	74.900	Microtus_ochrogaster
ENSHCOG00000004292	nmd3	92	89.662	ENSMMOG00000012765	nmd3	99	89.662	Mola_mola
ENSHCOG00000004292	nmd3	92	61.509	ENSMODG00000016296	NMD3	99	61.657	Monodelphis_domestica
ENSHCOG00000004292	nmd3	92	91.036	ENSMALG00000009256	nmd3	99	91.036	Monopterus_albus
ENSHCOG00000004292	nmd3	92	75.746	MGP_CAROLIEiJ_G0025069	Nmd3	99	75.746	Mus_caroli
ENSHCOG00000004292	nmd3	92	75.547	ENSMUSG00000027787	Nmd3	99	75.547	Mus_musculus
ENSHCOG00000004292	nmd3	92	75.547	MGP_PahariEiJ_G0026512	Nmd3	99	75.547	Mus_pahari
ENSHCOG00000004292	nmd3	92	75.746	MGP_SPRETEiJ_G0026011	Nmd3	99	75.746	Mus_spretus
ENSHCOG00000004292	nmd3	92	77.535	ENSMPUG00000002955	NMD3	99	77.535	Mustela_putorius_furo
ENSHCOG00000004292	nmd3	89	74.542	ENSMLUG00000000701	NMD3	97	74.745	Myotis_lucifugus
ENSHCOG00000004292	nmd3	92	76.541	ENSNGAG00000012307	Nmd3	99	76.541	Nannospalax_galili
ENSHCOG00000004292	nmd3	92	91.434	ENSNBRG00000003324	nmd3	99	91.434	Neolamprologus_brichardi
ENSHCOG00000004292	nmd3	92	77.137	ENSNLEG00000004655	NMD3	99	77.137	Nomascus_leucogenys
ENSHCOG00000004292	nmd3	67	69.298	ENSOPRG00000007690	-	73	69.298	Ochotona_princeps
ENSHCOG00000004292	nmd3	92	76.938	ENSODEG00000006270	NMD3	99	78.279	Octodon_degus
ENSHCOG00000004292	nmd3	92	91.833	ENSONIG00000003643	nmd3	99	91.833	Oreochromis_niloticus
ENSHCOG00000004292	nmd3	91	77.309	ENSOCUG00000017454	NMD3	99	77.309	Oryctolagus_cuniculus
ENSHCOG00000004292	nmd3	92	90.438	ENSORLG00000006279	nmd3	99	90.438	Oryzias_latipes
ENSHCOG00000004292	nmd3	92	90.239	ENSORLG00020003843	nmd3	99	90.239	Oryzias_latipes_hni
ENSHCOG00000004292	nmd3	92	90.239	ENSORLG00015006379	nmd3	99	90.239	Oryzias_latipes_hsok
ENSHCOG00000004292	nmd3	92	91.036	ENSOMEG00000012144	nmd3	99	91.036	Oryzias_melastigma
ENSHCOG00000004292	nmd3	92	76.342	ENSOGAG00000014910	NMD3	99	76.342	Otolemur_garnettii
ENSHCOG00000004292	nmd3	91	77.246	ENSOARG00000001883	NMD3	97	77.246	Ovis_aries
ENSHCOG00000004292	nmd3	92	77.137	ENSPPAG00000043829	NMD3	99	77.137	Pan_paniscus
ENSHCOG00000004292	nmd3	91	78.357	ENSPPRG00000000724	NMD3	97	78.357	Panthera_pardus
ENSHCOG00000004292	nmd3	92	77.535	ENSPTIG00000016761	NMD3	99	77.535	Panthera_tigris_altaica
ENSHCOG00000004292	nmd3	92	77.137	ENSPTRG00000015586	NMD3	99	77.355	Pan_troglodytes
ENSHCOG00000004292	nmd3	92	76.984	ENSPANG00000006665	NMD3	95	76.984	Papio_anubis
ENSHCOG00000004292	nmd3	92	87.052	ENSPKIG00000009928	nmd3	99	87.052	Paramormyrops_kingsleyae
ENSHCOG00000004292	nmd3	92	81.113	ENSPSIG00000007591	NMD3	99	81.113	Pelodiscus_sinensis
ENSHCOG00000004292	nmd3	92	86.255	ENSPMGG00000014015	nmd3	99	86.255	Periophthalmus_magnuspinnatus
ENSHCOG00000004292	nmd3	92	76.342	ENSPEMG00000021880	Nmd3	98	77.459	Peromyscus_maniculatus_bairdii
ENSHCOG00000004292	nmd3	92	79.523	ENSPCIG00000020869	NMD3	99	79.783	Phascolarctos_cinereus
ENSHCOG00000004292	nmd3	92	90.837	ENSPFOG00000012103	nmd3	99	90.837	Poecilia_formosa
ENSHCOG00000004292	nmd3	92	90.837	ENSPLAG00000008087	nmd3	99	90.837	Poecilia_latipinna
ENSHCOG00000004292	nmd3	92	90.837	ENSPMEG00000008506	nmd3	99	90.837	Poecilia_mexicana
ENSHCOG00000004292	nmd3	92	90.837	ENSPREG00000001848	nmd3	99	90.837	Poecilia_reticulata
ENSHCOG00000004292	nmd3	92	77.137	ENSPPYG00000014263	NMD3	99	77.137	Pongo_abelii
ENSHCOG00000004292	nmd3	84	62.826	ENSPCAG00000009851	NMD3	100	62.826	Procavia_capensis
ENSHCOG00000004292	nmd3	78	73.950	ENSPVAG00000003301	NMD3	85	73.950	Pteropus_vampyrus
ENSHCOG00000004292	nmd3	92	91.633	ENSPNYG00000006778	nmd3	99	91.633	Pundamilia_nyererei
ENSHCOG00000004292	nmd3	92	86.853	ENSPNAG00000009442	nmd3	99	86.853	Pygocentrus_nattereri
ENSHCOG00000004292	nmd3	92	75.149	ENSRNOG00000009310	Nmd3	99	75.149	Rattus_norvegicus
ENSHCOG00000004292	nmd3	92	73.161	ENSRBIG00000040379	NMD3	99	73.161	Rhinopithecus_bieti
ENSHCOG00000004292	nmd3	92	76.938	ENSRROG00000036181	NMD3	99	76.938	Rhinopithecus_roxellana
ENSHCOG00000004292	nmd3	89	44.158	YHR170W	NMD3	94	44.356	Saccharomyces_cerevisiae
ENSHCOG00000004292	nmd3	90	77.800	ENSSBOG00000024021	NMD3	99	76.754	Saimiri_boliviensis_boliviensis
ENSHCOG00000004292	nmd3	92	74.308	ENSSHAG00000016044	NMD3	99	74.308	Sarcophilus_harrisii
ENSHCOG00000004292	nmd3	92	87.052	ENSSFOG00015003609	nmd3	99	87.052	Scleropages_formosus
ENSHCOG00000004292	nmd3	92	90.040	ENSSMAG00000012887	nmd3	99	90.040	Scophthalmus_maximus
ENSHCOG00000004292	nmd3	92	92.032	ENSSDUG00000023721	nmd3	99	92.032	Seriola_dumerili
ENSHCOG00000004292	nmd3	92	91.434	ENSSLDG00000006565	nmd3	99	91.434	Seriola_lalandi_dorsalis
ENSHCOG00000004292	nmd3	89	76.434	ENSSARG00000010402	NMD3	99	76.434	Sorex_araneus
ENSHCOG00000004292	nmd3	91	79.359	ENSSPUG00000018791	NMD3	99	79.359	Sphenodon_punctatus
ENSHCOG00000004292	nmd3	92	91.235	ENSSPAG00000014328	nmd3	99	91.235	Stegastes_partitus
ENSHCOG00000004292	nmd3	92	75.944	ENSSSCG00000022952	NMD3	99	75.944	Sus_scrofa
ENSHCOG00000004292	nmd3	92	78.728	ENSTGUG00000011140	-	99	78.728	Taeniopygia_guttata
ENSHCOG00000004292	nmd3	84	77.007	ENSTGUG00000015141	-	100	77.007	Taeniopygia_guttata
ENSHCOG00000004292	nmd3	92	90.438	ENSTRUG00000005958	nmd3	99	90.438	Takifugu_rubripes
ENSHCOG00000004292	nmd3	92	55.467	ENSTBEG00000011783	-	99	55.467	Tupaia_belangeri
ENSHCOG00000004292	nmd3	92	72.167	ENSTTRG00000012938	NMD3	99	72.167	Tursiops_truncatus
ENSHCOG00000004292	nmd3	74	77.861	ENSUAMG00000009305	-	99	77.861	Ursus_americanus
ENSHCOG00000004292	nmd3	91	77.956	ENSUMAG00000011070	NMD3	99	77.912	Ursus_maritimus
ENSHCOG00000004292	nmd3	92	76.541	ENSVPAG00000008779	NMD3	99	76.541	Vicugna_pacos
ENSHCOG00000004292	nmd3	92	77.137	ENSVVUG00000023055	NMD3	99	77.510	Vulpes_vulpes
ENSHCOG00000004292	nmd3	92	81.113	ENSXETG00000027727	nmd3	99	81.113	Xenopus_tropicalis
ENSHCOG00000004292	nmd3	62	87.923	ENSXCOG00000012490	nmd3	82	92.683	Xiphophorus_couchianus
ENSHCOG00000004292	nmd3	92	90.837	ENSXMAG00000018406	nmd3	99	90.837	Xiphophorus_maculatus