EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000004513 (Gene tree)
Gene ID: 109515870
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 11380 bases
Position: chrKV879952.1:5409358-5420737
Accession: 109515870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019287	zf-RNPHF	PF08080.12	4.7e-08	1	1
ENSHCOP00000019287	RRM_1	PF00076.22	1.6e-30	1	3
ENSHCOP00000019287	RRM_1	PF00076.22	1.6e-30	2	3
ENSHCOP00000019287	RRM_1	PF00076.22	1.6e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009110	-	3201	XM_019869936	ENSHCOP00000019287	419 (aa)	XP_019725495	UPI00094E2C89

Gene Model

Click here to download ENSHCOG00000004513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000004513	hnrnph1	81	40.237	ENSHCOG00000007715	-	76	39.941
ENSHCOG00000004513	hnrnph1	98	59.677	ENSHCOG00000014335	hnrnph3	93	59.409

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004513	hnrnph1	100	88.361	ENSAPOG00000016614	hnrnph1	100	85.511	Acanthochromis_polyacanthus
ENSHCOG00000004513	hnrnph1	98	88.946	ENSACIG00000008964	hnrnph1	98	88.689	Amphilophus_citrinellus
ENSHCOG00000004513	hnrnph1	100	88.836	ENSAOCG00000008372	hnrnph1	100	85.511	Amphiprion_ocellaris
ENSHCOG00000004513	hnrnph1	100	88.599	ENSAPEG00000012980	hnrnph1	100	85.273	Amphiprion_percula
ENSHCOG00000004513	hnrnph1	100	89.074	ENSATEG00000002792	hnrnph1	100	85.748	Anabas_testudineus
ENSHCOG00000004513	hnrnph1	99	70.419	ENSACAG00000016323	-	79	78.237	Anolis_carolinensis
ENSHCOG00000004513	hnrnph1	93	91.831	ENSACLG00000003313	hnrnph1	96	90.652	Astatotilapia_calliptera
ENSHCOG00000004513	hnrnph1	99	76.540	ENSAMXG00000030703	hnrnph1l	84	74.882	Astyanax_mexicanus
ENSHCOG00000004513	hnrnph1	100	77.882	ENSAMXG00000002483	hnrnph1	100	76.581	Astyanax_mexicanus
ENSHCOG00000004513	hnrnph1	100	84.123	ENSCSEG00000015891	hnrnph1	100	85.545	Cynoglossus_semilaevis
ENSHCOG00000004513	hnrnph1	100	86.936	ENSCVAG00000014097	hnrnph1	100	83.373	Cyprinodon_variegatus
ENSHCOG00000004513	hnrnph1	95	79.851	ENSDARG00000005551	hnrnph1l	99	76.777	Danio_rerio
ENSHCOG00000004513	hnrnph1	93	77.608	ENSDARG00000040881	hnrnph1	94	78.626	Danio_rerio
ENSHCOG00000004513	hnrnph1	92	79.644	ENSELUG00000021437	-	99	79.644	Esox_lucius
ENSHCOG00000004513	hnrnph1	100	83.765	ENSELUG00000006715	hnrnph1	86	86.835	Esox_lucius
ENSHCOG00000004513	hnrnph1	100	85.748	ENSFHEG00000008474	hnrnph1	100	82.185	Fundulus_heteroclitus
ENSHCOG00000004513	hnrnph1	92	84.673	ENSGMOG00000006782	hnrnph1	97	84.422	Gadus_morhua
ENSHCOG00000004513	hnrnph1	100	87.648	ENSGAFG00000006280	hnrnph1	100	84.086	Gambusia_affinis
ENSHCOG00000004513	hnrnph1	100	85.273	ENSGACG00000018352	hnrnph1	99	81.412	Gasterosteus_aculeatus
ENSHCOG00000004513	hnrnph1	93	91.831	ENSHBUG00000010547	hnrnph1	97	90.652	Haplochromis_burtoni
ENSHCOG00000004513	hnrnph1	95	78.055	ENSIPUG00000024047	hnrnph1l	90	77.749	Ictalurus_punctatus
ENSHCOG00000004513	hnrnph1	100	78.960	ENSIPUG00000018262	hnrnph1	100	77.305	Ictalurus_punctatus
ENSHCOG00000004513	hnrnph1	100	88.361	ENSKMAG00000018802	hnrnph1	100	84.798	Kryptolebias_marmoratus
ENSHCOG00000004513	hnrnph1	100	88.124	ENSLBEG00000027811	hnrnph1	100	84.798	Labrus_bergylta
ENSHCOG00000004513	hnrnph1	99	79.557	ENSLOCG00000012510	hnrnph1	91	78.960	Lepisosteus_oculatus
ENSHCOG00000004513	hnrnph1	99	52.546	ENSMMUG00000017392	-	80	53.889	Macaca_mulatta
ENSHCOG00000004513	hnrnph1	99	52.294	ENSMNEG00000030544	-	79	53.889	Macaca_nemestrina
ENSHCOG00000004513	hnrnph1	85	87.978	ENSMAMG00000011478	hnrnph1	97	89.011	Mastacembelus_armatus
ENSHCOG00000004513	hnrnph1	100	88.361	ENSMZEG00005009791	hnrnph1	100	84.798	Maylandia_zebra
ENSHCOG00000004513	hnrnph1	92	88.432	ENSMMOG00000009064	hnrnph1	98	84.010	Mola_mola
ENSHCOG00000004513	hnrnph1	74	51.198	ENSMODG00000002200	-	88	50.825	Monodelphis_domestica
ENSHCOG00000004513	hnrnph1	93	90.251	ENSMALG00000003999	hnrnph1	98	89.916	Monopterus_albus
ENSHCOG00000004513	hnrnph1	93	91.831	ENSNBRG00000015406	hnrnph1	97	90.652	Neolamprologus_brichardi
ENSHCOG00000004513	hnrnph1	100	88.599	ENSONIG00000017754	hnrnph1	100	85.036	Oreochromis_niloticus
ENSHCOG00000004513	hnrnph1	100	87.648	ENSORLG00000006932	hnrnph1	100	85.748	Oryzias_latipes
ENSHCOG00000004513	hnrnph1	100	87.648	ENSORLG00020007881	hnrnph1	100	85.748	Oryzias_latipes_hni
ENSHCOG00000004513	hnrnph1	100	87.648	ENSORLG00015005306	hnrnph1	100	85.748	Oryzias_latipes_hsok
ENSHCOG00000004513	hnrnph1	100	88.361	ENSOMEG00000009827	hnrnph1	99	89.691	Oryzias_melastigma
ENSHCOG00000004513	hnrnph1	93	80.397	ENSPKIG00000009532	-	93	80.645	Paramormyrops_kingsleyae
ENSHCOG00000004513	hnrnph1	100	81.221	ENSPKIG00000018203	hnrnph1l	100	78.302	Paramormyrops_kingsleyae
ENSHCOG00000004513	hnrnph1	100	84.561	ENSPMGG00000012151	hnrnph1	100	82.185	Periophthalmus_magnuspinnatus
ENSHCOG00000004513	hnrnph1	100	88.124	ENSPFOG00000004097	hnrnph1	100	84.561	Poecilia_formosa
ENSHCOG00000004513	hnrnph1	100	88.124	ENSPLAG00000011771	hnrnph1	100	84.561	Poecilia_latipinna
ENSHCOG00000004513	hnrnph1	100	87.886	ENSPMEG00000019446	hnrnph1	100	84.323	Poecilia_mexicana
ENSHCOG00000004513	hnrnph1	100	87.648	ENSPREG00000005780	hnrnph1	100	84.086	Poecilia_reticulata
ENSHCOG00000004513	hnrnph1	100	88.361	ENSPNYG00000000204	hnrnph1	97	90.652	Pundamilia_nyererei
ENSHCOG00000004513	hnrnph1	100	78.118	ENSPNAG00000000439	hnrnph1	98	78.827	Pygocentrus_nattereri
ENSHCOG00000004513	hnrnph1	99	77.962	ENSPNAG00000002784	hnrnph1l	97	82.768	Pygocentrus_nattereri
ENSHCOG00000004513	hnrnph1	98	81.141	ENSSFOG00015016055	-	94	80.203	Scleropages_formosus
ENSHCOG00000004513	hnrnph1	96	84.069	ENSSFOG00015022796	hnrnph1l	100	80.660	Scleropages_formosus
ENSHCOG00000004513	hnrnph1	95	88.860	ENSSMAG00000007820	hnrnph1	96	86.528	Scophthalmus_maximus
ENSHCOG00000004513	hnrnph1	100	88.836	ENSSDUG00000008785	hnrnph1	100	85.511	Seriola_dumerili
ENSHCOG00000004513	hnrnph1	100	88.836	ENSSLDG00000010685	hnrnph1	100	85.511	Seriola_lalandi_dorsalis
ENSHCOG00000004513	hnrnph1	100	87.886	ENSSPAG00000009921	hnrnph1	100	85.273	Stegastes_partitus
ENSHCOG00000004513	hnrnph1	100	86.461	ENSTRUG00000020069	hnrnph1	100	82.270	Takifugu_rubripes
ENSHCOG00000004513	hnrnph1	99	72.045	ENSXETG00000018321	hnrnph1	83	77.778	Xenopus_tropicalis
ENSHCOG00000004513	hnrnph1	93	89.541	ENSXCOG00000009133	hnrnph1	97	88.776	Xiphophorus_couchianus
ENSHCOG00000004513	hnrnph1	92	88.175	ENSXMAG00000021332	hnrnph1	99	87.661	Xiphophorus_maculatus