EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000004536 (Gene tree)
Gene ID: 109522297
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 5-B-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 10533 bases
Position: chrKV880150.1:5026721-5037253
Accession: 109522297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003249	zf-RanBP	PF00641.18	4.4e-10	1	1
ENSHCOP00000003249	RRM_1	PF00076.22	5.8e-15	1	2
ENSHCOP00000003249	RRM_1	PF00076.22	5.8e-15	2	2
ENSHCOP00000003249	G-patch	PF01585.23	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000009063	-	3222	XM_019880717	ENSHCOP00000003249	863 (aa)	XP_019736276	-

Gene Model

Click here to download ENSHCOG00000004536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000004536	-	91	57.298	ENSHCOG00000017110	rbm5	100	56.563
ENSHCOG00000004536	-	81	40.106	ENSHCOG00000002211	rbm10	78	39.895

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004536	-	100	52.213	ENSG00000003756	RBM5	100	55.319	Homo_sapiens
ENSHCOG00000004536	-	100	56.154	ENSAPOG00000016625	rbm5	100	56.484	Acanthochromis_polyacanthus
ENSHCOG00000004536	-	100	66.140	ENSAPOG00000006011	-	100	66.479	Acanthochromis_polyacanthus
ENSHCOG00000004536	-	100	51.873	ENSAMEG00000012005	RBM5	100	52.955	Ailuropoda_melanoleuca
ENSHCOG00000004536	-	99	60.731	ENSACIG00000021310	-	99	59.361	Amphilophus_citrinellus
ENSHCOG00000004536	-	64	64.539	ENSACIG00000007571	rbm5	100	59.016	Amphilophus_citrinellus
ENSHCOG00000004536	-	99	63.031	ENSAOCG00000017312	-	99	62.959	Amphiprion_ocellaris
ENSHCOG00000004536	-	100	56.393	ENSAOCG00000002880	rbm5	100	56.018	Amphiprion_ocellaris
ENSHCOG00000004536	-	91	55.355	ENSAPEG00000011862	rbm5	92	56.527	Amphiprion_percula
ENSHCOG00000004536	-	100	66.253	ENSAPEG00000018222	RBM5	100	66.366	Amphiprion_percula
ENSHCOG00000004536	-	100	56.589	ENSATEG00000024663	rbm5	100	56.811	Anabas_testudineus
ENSHCOG00000004536	-	100	67.821	ENSATEG00000003838	-	100	68.013	Anabas_testudineus
ENSHCOG00000004536	-	94	53.236	ENSAPLG00000011176	RBM5	99	53.780	Anas_platyrhynchos
ENSHCOG00000004536	-	100	51.794	ENSACAG00000008580	RBM5	100	52.296	Anolis_carolinensis
ENSHCOG00000004536	-	100	52.203	ENSANAG00000025199	RBM5	100	53.182	Aotus_nancymaae
ENSHCOG00000004536	-	100	55.326	ENSACLG00000012748	rbm5	100	56.593	Astatotilapia_calliptera
ENSHCOG00000004536	-	100	62.767	ENSACLG00000024198	RBM5	100	67.442	Astatotilapia_calliptera
ENSHCOG00000004536	-	85	57.461	ENSAMXG00000008146	rbm5	100	57.199	Astyanax_mexicanus
ENSHCOG00000004536	-	100	51.646	ENSBTAG00000006330	RBM5	100	52.727	Bos_taurus
ENSHCOG00000004536	-	100	52.045	ENSCJAG00000004740	RBM5	100	53.129	Callithrix_jacchus
ENSHCOG00000004536	-	100	51.986	ENSCAFG00000010866	RBM5	100	53.068	Canis_familiaris
ENSHCOG00000004536	-	100	51.986	ENSCAFG00020022126	RBM5	100	53.068	Canis_lupus_dingo
ENSHCOG00000004536	-	100	51.759	ENSCHIG00000018435	RBM5	100	52.841	Capra_hircus
ENSHCOG00000004536	-	82	52.990	ENSTSYG00000004158	RBM5	100	54.318	Carlito_syrichta
ENSHCOG00000004536	-	100	42.334	ENSCAPG00000013495	RBM5	99	43.052	Cavia_aperea
ENSHCOG00000004536	-	100	51.936	ENSCPOG00000008151	RBM5	100	53.068	Cavia_porcellus
ENSHCOG00000004536	-	99	51.826	ENSCCAG00000026401	RBM5	100	52.316	Cebus_capucinus
ENSHCOG00000004536	-	100	52.100	ENSCATG00000041038	RBM5	100	53.182	Cercocebus_atys
ENSHCOG00000004536	-	100	52.560	ENSCLAG00000007873	RBM5	100	53.068	Chinchilla_lanigera
ENSHCOG00000004536	-	100	52.100	ENSCSAG00000014401	RBM5	100	53.182	Chlorocebus_sabaeus
ENSHCOG00000004536	-	77	50.963	ENSCHOG00000009429	RBM5	85	51.556	Choloepus_hoffmanni
ENSHCOG00000004536	-	100	51.740	ENSCPBG00000002406	RBM5	100	52.744	Chrysemys_picta_bellii
ENSHCOG00000004536	-	100	51.642	ENSCANG00000031250	RBM5	100	52.506	Colobus_angolensis_palliatus
ENSHCOG00000004536	-	100	52.041	ENSCGRG00001010543	Rbm5	100	53.689	Cricetulus_griseus_chok1gshd
ENSHCOG00000004536	-	100	52.041	ENSCGRG00000008475	Rbm5	100	53.689	Cricetulus_griseus_crigri
ENSHCOG00000004536	-	98	55.666	ENSCSEG00000000596	rbm5	97	56.450	Cynoglossus_semilaevis
ENSHCOG00000004536	-	100	55.543	ENSCVAG00000005655	rbm5	100	56.763	Cyprinodon_variegatus
ENSHCOG00000004536	-	100	50.055	ENSDARG00000098280	rbm5	100	58.170	Danio_rerio
ENSHCOG00000004536	-	100	51.986	ENSDNOG00000011756	RBM5	100	52.955	Dasypus_novemcinctus
ENSHCOG00000004536	-	100	51.873	ENSDORG00000007692	Rbm5	100	53.409	Dipodomys_ordii
ENSHCOG00000004536	-	92	50.856	ENSETEG00000012773	RBM5	93	50.243	Echinops_telfairi
ENSHCOG00000004536	-	94	38.771	ENSEBUG00000017034	rbm5	95	38.801	Eptatretus_burgeri
ENSHCOG00000004536	-	100	51.986	ENSEASG00005011835	RBM5	100	53.068	Equus_asinus_asinus
ENSHCOG00000004536	-	100	51.986	ENSECAG00000020447	RBM5	100	53.068	Equus_caballus
ENSHCOG00000004536	-	86	51.657	ENSEEUG00000005943	RBM5	87	53.801	Erinaceus_europaeus
ENSHCOG00000004536	-	100	55.652	ENSELUG00000022467	rbm5	100	55.702	Esox_lucius
ENSHCOG00000004536	-	100	52.440	ENSFCAG00000014639	RBM5	100	52.955	Felis_catus
ENSHCOG00000004536	-	93	53.676	ENSFALG00000008828	RBM5	97	52.613	Ficedula_albicollis
ENSHCOG00000004536	-	100	52.005	ENSFDAG00000001897	RBM5	100	52.517	Fukomys_damarensis
ENSHCOG00000004536	-	100	56.778	ENSFHEG00000015954	rbm5	100	58.140	Fundulus_heteroclitus
ENSHCOG00000004536	-	100	50.401	ENSGMOG00000007810	-	100	50.630	Gadus_morhua
ENSHCOG00000004536	-	99	52.935	ENSGMOG00000016224	rbm5	99	54.484	Gadus_morhua
ENSHCOG00000004536	-	93	53.064	ENSGALG00000039288	RBM5	97	52.343	Gallus_gallus
ENSHCOG00000004536	-	100	56.154	ENSGAFG00000010690	rbm5	100	57.582	Gambusia_affinis
ENSHCOG00000004536	-	100	54.566	ENSGACG00000010469	rbm5	100	55.405	Gasterosteus_aculeatus
ENSHCOG00000004536	-	100	63.946	ENSGACG00000000858	-	100	63.379	Gasterosteus_aculeatus
ENSHCOG00000004536	-	90	55.185	ENSGAGG00000007935	RBM5	99	55.487	Gopherus_agassizii
ENSHCOG00000004536	-	100	52.100	ENSGGOG00000014490	RBM5	100	53.182	Gorilla_gorilla
ENSHCOG00000004536	-	100	55.098	ENSHBUG00000001941	rbm5	100	56.250	Haplochromis_burtoni
ENSHCOG00000004536	-	100	63.524	ENSHBUG00000011901	-	100	67.442	Haplochromis_burtoni
ENSHCOG00000004536	-	100	51.822	ENSHGLG00000014844	RBM5	100	52.901	Heterocephalus_glaber_female
ENSHCOG00000004536	-	100	51.991	ENSHGLG00100010739	RBM5	100	53.068	Heterocephalus_glaber_male
ENSHCOG00000004536	-	100	56.195	ENSIPUG00000000640	rbm5	100	57.508	Ictalurus_punctatus
ENSHCOG00000004536	-	100	51.986	ENSSTOG00000013856	RBM5	100	53.925	Ictidomys_tridecemlineatus
ENSHCOG00000004536	-	100	52.554	ENSJJAG00000008844	Rbm5	100	53.864	Jaculus_jaculus
ENSHCOG00000004536	-	100	56.229	ENSKMAG00000006663	rbm5	100	57.017	Kryptolebias_marmoratus
ENSHCOG00000004536	-	78	50.221	ENSLBEG00000002522	-	100	48.971	Labrus_bergylta
ENSHCOG00000004536	-	100	55.899	ENSLBEG00000020858	rbm5	100	56.071	Labrus_bergylta
ENSHCOG00000004536	-	100	64.022	ENSLBEG00000010877	-	94	64.004	Labrus_bergylta
ENSHCOG00000004536	-	90	58.575	ENSLACG00000016572	RBM5	100	53.153	Latimeria_chalumnae
ENSHCOG00000004536	-	100	55.580	ENSLOCG00000010774	rbm5	100	55.905	Lepisosteus_oculatus
ENSHCOG00000004536	-	100	52.332	ENSLAFG00000006733	RBM5	100	53.068	Loxodonta_africana
ENSHCOG00000004536	-	100	52.100	ENSMFAG00000031609	RBM5	100	53.182	Macaca_fascicularis
ENSHCOG00000004536	-	99	51.941	ENSMMUG00000004921	RBM5	99	53.029	Macaca_mulatta
ENSHCOG00000004536	-	100	52.100	ENSMNEG00000044394	RBM5	100	53.182	Macaca_nemestrina
ENSHCOG00000004536	-	100	51.367	ENSMLEG00000034689	RBM5	100	52.446	Mandrillus_leucophaeus
ENSHCOG00000004536	-	100	56.641	ENSMAMG00000017277	rbm5	100	56.656	Mastacembelus_armatus
ENSHCOG00000004536	-	100	67.418	ENSMAMG00000023948	-	100	61.231	Mastacembelus_armatus
ENSHCOG00000004536	-	100	55.326	ENSMZEG00005015328	rbm5	100	56.593	Maylandia_zebra
ENSHCOG00000004536	-	100	62.542	ENSMZEG00005010035	-	100	62.725	Maylandia_zebra
ENSHCOG00000004536	-	93	53.186	ENSMGAG00000003972	RBM5	100	53.856	Meleagris_gallopavo
ENSHCOG00000004536	-	99	52.511	ENSMAUG00000020572	Rbm5	98	53.714	Mesocricetus_auratus
ENSHCOG00000004536	-	100	52.213	ENSMICG00000016179	RBM5	100	53.295	Microcebus_murinus
ENSHCOG00000004536	-	100	52.213	ENSMOCG00000017479	Rbm5	100	53.864	Microtus_ochrogaster
ENSHCOG00000004536	-	99	53.075	ENSMMOG00000021804	-	99	53.075	Mola_mola
ENSHCOG00000004536	-	97	61.905	ENSMMOG00000015342	rbm5	93	64.881	Mola_mola
ENSHCOG00000004536	-	100	52.740	ENSMODG00000012301	RBM5	100	53.977	Monodelphis_domestica
ENSHCOG00000004536	-	99	53.837	ENSMALG00000000609	rbm5	99	53.829	Monopterus_albus
ENSHCOG00000004536	-	100	65.051	ENSMALG00000016769	-	100	64.859	Monopterus_albus
ENSHCOG00000004536	-	100	52.105	MGP_CAROLIEiJ_G0032660	Rbm5	90	70.803	Mus_caroli
ENSHCOG00000004536	-	100	52.218	ENSMUSG00000032580	Rbm5	89	70.803	Mus_musculus
ENSHCOG00000004536	-	100	52.105	MGP_PahariEiJ_G0015528	Rbm5	90	70.290	Mus_pahari
ENSHCOG00000004536	-	100	52.218	MGP_SPRETEiJ_G0033805	Rbm5	90	70.803	Mus_spretus
ENSHCOG00000004536	-	100	51.305	ENSMLUG00000007875	RBM5	100	52.727	Myotis_lucifugus
ENSHCOG00000004536	-	100	51.701	ENSNGAG00000011777	Rbm5	100	52.768	Nannospalax_galili
ENSHCOG00000004536	-	98	59.054	ENSNBRG00000004400	RBM5	100	59.400	Neolamprologus_brichardi
ENSHCOG00000004536	-	100	54.989	ENSNBRG00000018097	rbm5	100	56.140	Neolamprologus_brichardi
ENSHCOG00000004536	-	100	52.100	ENSNLEG00000006943	RBM5	100	53.182	Nomascus_leucogenys
ENSHCOG00000004536	-	99	48.677	ENSMEUG00000012994	RBM5	99	49.943	Notamacropus_eugenii
ENSHCOG00000004536	-	92	51.232	ENSOPRG00000015154	RBM5	93	51.345	Ochotona_princeps
ENSHCOG00000004536	-	100	51.877	ENSODEG00000016254	-	100	52.955	Octodon_degus
ENSHCOG00000004536	-	100	50.514	ENSODEG00000019111	-	100	51.708	Octodon_degus
ENSHCOG00000004536	-	100	63.330	ENSONIG00000019007	RBM5	100	63.514	Oreochromis_niloticus
ENSHCOG00000004536	-	100	55.266	ENSONIG00000004107	rbm5	100	55.702	Oreochromis_niloticus
ENSHCOG00000004536	-	88	53.351	ENSOANG00000006557	RBM5	100	54.134	Ornithorhynchus_anatinus
ENSHCOG00000004536	-	100	52.105	ENSOCUG00000011652	RBM5	100	52.841	Oryctolagus_cuniculus
ENSHCOG00000004536	-	91	59.515	ENSORLG00000003369	rbm5	99	59.129	Oryzias_latipes
ENSHCOG00000004536	-	100	57.848	ENSORLG00000001053	-	100	57.175	Oryzias_latipes
ENSHCOG00000004536	-	90	60.494	ENSORLG00020006782	-	98	59.753	Oryzias_latipes_hni
ENSHCOG00000004536	-	100	56.181	ENSORLG00020021744	rbm5	100	56.022	Oryzias_latipes_hni
ENSHCOG00000004536	-	90	61.111	ENSORLG00015002854	-	98	60.000	Oryzias_latipes_hsok
ENSHCOG00000004536	-	100	56.402	ENSORLG00015018379	rbm5	99	58.140	Oryzias_latipes_hsok
ENSHCOG00000004536	-	100	56.318	ENSOMEG00000002219	rbm5	100	56.127	Oryzias_melastigma
ENSHCOG00000004536	-	75	70.312	ENSOMEG00000010653	-	97	49.371	Oryzias_melastigma
ENSHCOG00000004536	-	93	51.707	ENSOGAG00000004205	RBM5	100	52.445	Otolemur_garnettii
ENSHCOG00000004536	-	100	51.759	ENSOARG00000010923	RBM5	100	52.841	Ovis_aries
ENSHCOG00000004536	-	100	52.100	ENSPPAG00000043010	RBM5	100	53.182	Pan_paniscus
ENSHCOG00000004536	-	100	52.440	ENSPPRG00000005404	RBM5	100	52.955	Panthera_pardus
ENSHCOG00000004536	-	100	52.440	ENSPTIG00000000962	RBM5	100	52.955	Panthera_tigris_altaica
ENSHCOG00000004536	-	100	52.100	ENSPTRG00000014946	RBM5	100	53.182	Pan_troglodytes
ENSHCOG00000004536	-	100	52.100	ENSPANG00000018507	RBM5	100	53.182	Papio_anubis
ENSHCOG00000004536	-	100	55.702	ENSPKIG00000024837	RBM5	100	56.106	Paramormyrops_kingsleyae
ENSHCOG00000004536	-	78	48.516	ENSPKIG00000019187	-	100	48.665	Paramormyrops_kingsleyae
ENSHCOG00000004536	-	88	53.876	ENSPSIG00000016073	RBM5	100	54.065	Pelodiscus_sinensis
ENSHCOG00000004536	-	84	70.000	ENSPMGG00000004719	-	99	68.876	Periophthalmus_magnuspinnatus
ENSHCOG00000004536	-	80	46.724	ENSPMGG00000017347	rbm5	100	48.011	Periophthalmus_magnuspinnatus
ENSHCOG00000004536	-	99	39.592	ENSPMAG00000001998	rbm5	99	40.286	Petromyzon_marinus
ENSHCOG00000004536	-	100	52.626	ENSPCIG00000021531	RBM5	100	53.750	Phascolarctos_cinereus
ENSHCOG00000004536	-	100	56.154	ENSPLAG00000006318	rbm5	100	57.065	Poecilia_latipinna
ENSHCOG00000004536	-	75	53.577	ENSPMEG00000008651	rbm5	99	54.242	Poecilia_mexicana
ENSHCOG00000004536	-	100	55.617	ENSPMEG00000004295	rbm5	100	57.346	Poecilia_mexicana
ENSHCOG00000004536	-	100	56.484	ENSPREG00000003795	rbm5	100	57.566	Poecilia_reticulata
ENSHCOG00000004536	-	59	54.545	ENSPCAG00000005459	RBM5	73	53.000	Procavia_capensis
ENSHCOG00000004536	-	100	52.715	ENSPCOG00000025840	RBM5	100	53.182	Propithecus_coquereli
ENSHCOG00000004536	-	100	50.624	ENSPVAG00000006812	RBM5	100	51.932	Pteropus_vampyrus
ENSHCOG00000004536	-	84	63.382	ENSPNYG00000006361	RBM5	99	62.800	Pundamilia_nyererei
ENSHCOG00000004536	-	100	54.989	ENSPNYG00000014787	rbm5	100	56.140	Pundamilia_nyererei
ENSHCOG00000004536	-	100	56.608	ENSPNAG00000012070	rbm5	100	56.970	Pygocentrus_nattereri
ENSHCOG00000004536	-	100	52.105	ENSRNOG00000018153	Rbm5	100	53.636	Rattus_norvegicus
ENSHCOG00000004536	-	100	52.316	ENSRBIG00000012679	RBM5	100	53.295	Rhinopithecus_bieti
ENSHCOG00000004536	-	100	52.632	ENSRROG00000041331	RBM5	100	53.295	Rhinopithecus_roxellana
ENSHCOG00000004536	-	100	51.986	ENSSBOG00000006324	RBM5	100	53.068	Saimiri_boliviensis_boliviensis
ENSHCOG00000004536	-	100	52.800	ENSSHAG00000018260	RBM5	100	53.925	Sarcophilus_harrisii
ENSHCOG00000004536	-	100	56.285	ENSSFOG00015019052	rbm5	94	57.064	Scleropages_formosus
ENSHCOG00000004536	-	100	57.901	ENSSFOG00015019645	-	100	58.129	Scleropages_formosus
ENSHCOG00000004536	-	100	55.740	ENSSMAG00000017106	rbm5	100	56.608	Scophthalmus_maximus
ENSHCOG00000004536	-	100	56.332	ENSSDUG00000019775	rbm5	100	56.550	Seriola_dumerili
ENSHCOG00000004536	-	100	67.340	ENSSLDG00000015996	-	100	67.340	Seriola_lalandi_dorsalis
ENSHCOG00000004536	-	100	56.223	ENSSLDG00000002329	rbm5	100	56.441	Seriola_lalandi_dorsalis
ENSHCOG00000004536	-	100	48.857	ENSSPUG00000001876	RBM5	92	51.403	Sphenodon_punctatus
ENSHCOG00000004536	-	100	66.929	ENSSPAG00000020011	-	100	67.042	Stegastes_partitus
ENSHCOG00000004536	-	100	54.585	ENSSPAG00000019638	rbm5	100	56.202	Stegastes_partitus
ENSHCOG00000004536	-	100	51.986	ENSSSCG00000011395	RBM5	100	54.762	Sus_scrofa
ENSHCOG00000004536	-	93	48.407	ENSTGUG00000006417	RBM5	99	48.201	Taeniopygia_guttata
ENSHCOG00000004536	-	100	55.580	ENSTRUG00000008292	rbm5	100	56.682	Takifugu_rubripes
ENSHCOG00000004536	-	99	43.581	ENSTNIG00000014742	rbm5	89	53.035	Tetraodon_nigroviridis
ENSHCOG00000004536	-	100	46.364	ENSTBEG00000005424	RBM5	100	47.440	Tupaia_belangeri
ENSHCOG00000004536	-	84	56.098	ENSTTRG00000007717	RBM5	97	56.098	Tursiops_truncatus
ENSHCOG00000004536	-	100	51.873	ENSUAMG00000028347	RBM5	100	52.955	Ursus_americanus
ENSHCOG00000004536	-	100	51.873	ENSUMAG00000022027	RBM5	100	52.955	Ursus_maritimus
ENSHCOG00000004536	-	86	52.646	ENSVPAG00000009388	RBM5	100	53.907	Vicugna_pacos
ENSHCOG00000004536	-	100	51.986	ENSVVUG00000028647	RBM5	100	53.068	Vulpes_vulpes
ENSHCOG00000004536	-	100	56.484	ENSXMAG00000016369	rbm5	100	57.237	Xiphophorus_maculatus