EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHCOG00000004662 (Gene tree)
Gene ID
109532252
Gene Symbol
rab5c
Alias
wu:fb98b08|wu:fi16g01
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Hippocampus_comes
Status
putative
Strand
Minus strand
Length
3047 bases
Position
chrKV879792.1:453491-456537
Accession
109532252
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHCOP00000003345MMR_HSR1PF01926.230.0001211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHCOT00000008886-1681XM_019897018ENSHCOP00000003345224 (aa)XP_019752577UPI00094EFC43
Gene Model
Click here to download ENSHCOG00000004662's gene model file
Pathways
Pathway IDPathway NameSource
hcq04144EndocytosisKEGG
hcq04145PhagosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004662's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHCOG00000004662rab5c7853.143ENSHCOG00000001145rab22a8454.601
ENSHCOG00000004662rab5c7048.408ENSHCOG00000000232rab11al7348.408
ENSHCOG00000004662rab5c7542.857ENSHCOG00000014428rab2a7644.099
ENSHCOG00000004662rab5c8741.667ENSHCOG00000002423rab11bb7547.853
ENSHCOG00000004662rab5c7737.079ENSHCOG00000012376rab127137.791
ENSHCOG00000004662rab5c8640.625ENSHCOG00000013130rab6bb8243.529
ENSHCOG00000004662rab5c8743.878ENSHCOG00000019468rab1ba8147.853
ENSHCOG00000004662rab5c7544.910ENSHCOG00000006550-8044.910
ENSHCOG00000004662rab5c8136.898ENSHCOG00000005802RAB9A9934.389
ENSHCOG00000004662rab5c8743.590ENSHCOG00000010023-9643.590
ENSHCOG00000004662rab5c8841.919ENSHCOG00000013180-9241.919
ENSHCOG00000004662rab5c8139.512ENSHCOG00000004225-9938.350
ENSHCOG00000004662rab5c8735.821ENSHCOG00000006538si:dkey-16l2.169635.821
ENSHCOG00000004662rab5c9033.014ENSHCOG00000005024rab9b8534.857
ENSHCOG00000004662rab5c8940.704ENSHCOG00000014711rab6ba8444.000
ENSHCOG00000004662rab5c7242.236ENSHCOG00000007440rab138842.236
ENSHCOG00000004662rab5c6140.876ENSHCOG00000010707rab307440.876
ENSHCOG00000004662rab5c7433.133ENSHCOG00000011080kras9032.164
ENSHCOG00000004662rab5c7239.157ENSHCOG00000004726rab33a7239.053
ENSHCOG00000004662rab5c7237.805ENSHCOG00000019732-7737.805
ENSHCOG00000004662rab5c7347.853ENSHCOG00000000954-7549.367
ENSHCOG00000004662rab5c5331.148ENSHCOG00000005512-6131.148
ENSHCOG00000004662rab5c5433.871ENSHCOG00000010468arl8bb6333.871
ENSHCOG00000004662rab5c8844.554ENSHCOG00000013095rab25a9544.554
ENSHCOG00000004662rab5c7230.061ENSHCOG00000003667rhebl18830.061
ENSHCOG00000004662rab5c5331.967ENSHCOG00000000920arl8ba6231.967
ENSHCOG00000004662rab5c8941.206ENSHCOG00000019224rab149241.206
ENSHCOG00000004662rab5c7347.853ENSHCOG00000001137rab1ab8047.853
ENSHCOG00000004662rab5c6334.286ENSHCOG00000013919rab237435.526
ENSHCOG00000004662rab5c9482.857ENSHCOG00000020238-9981.735
ENSHCOG00000004662rab5c7234.161ENSHCOG00000009757ran7334.161
ENSHCOG00000004662rab5c8640.933ENSHCOG00000007187rab25b8440.933
ENSHCOG00000004662rab5c7538.462ENSHCOG00000017123-7938.462
ENSHCOG00000004662rab5c7732.370ENSHCOG00000013807rheb8333.766
ENSHCOG00000004662rab5c7137.107ENSHCOG00000017086RAB157437.107
ENSHCOG00000004662rab5c7738.342ENSHCOG00000003569rab33ba8036.458
ENSHCOG00000004662rab5c7440.936ENSHCOG00000009133zgc:1015597240.936
ENSHCOG00000004662rab5c6539.610ENSHCOG00000012834-6439.610
ENSHCOG00000004662rab5c7530.178ENSHCOG00000002043rras28330.178
ENSHCOG00000004662rab5c8939.320ENSHCOG00000016322RAB7A9939.320
ENSHCOG00000004662rab5c7534.857ENSHCOG00000004086rab9a8534.857
ENSHCOG00000004662rab5c7248.447ENSHCOG00000000985-7749.682
ENSHCOG00000004662rab5c7842.857ENSHCOG00000004404rab418342.857
ENSHCOG00000004662rab5c7347.853ENSHCOG00000005652rab11a7647.853
ENSHCOG00000004662rab5c7238.415ENSHCOG00000003981RAB39B7738.415
ENSHCOG00000004662rab5c8143.878ENSHCOG00000002217rab18b8045.455
ENSHCOG00000004662rab5c8337.037ENSHCOG00000015692si:dkey-34d22.57737.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHCOG00000004662rab5c9790.783ENSG00000108774RAB5C10095.200Homo_sapiens
ENSHCOG00000004662rab5c9896.804ENSAPOG00000016864rab5c9996.804Acanthochromis_polyacanthus
ENSHCOG00000004662rab5c9790.783ENSAMEG00000006003RAB5C9989.862Ailuropoda_melanoleuca
ENSHCOG00000004662rab5c9996.833ENSACIG00000010896rab5c10096.833Amphilophus_citrinellus
ENSHCOG00000004662rab5c9896.804ENSAOCG00000016614rab5c9996.804Amphiprion_ocellaris
ENSHCOG00000004662rab5c9696.729ENSAPEG00000017868-9896.729Amphiprion_percula
ENSHCOG00000004662rab5c9798.165ENSATEG00000001937rab5c9998.165Anabas_testudineus
ENSHCOG00000004662rab5c9292.718ENSANAG00000025390RAB5C10091.262Aotus_nancymaae
ENSHCOG00000004662rab5c9995.475ENSACLG00000002706rab5c10095.475Astatotilapia_calliptera
ENSHCOG00000004662rab5c9591.080ENSACLG00000008615-10089.686Astatotilapia_calliptera
ENSHCOG00000004662rab5c9789.450ENSAMXG00000037267-10089.450Astyanax_mexicanus
ENSHCOG00000004662rab5c9898.174ENSAMXG00000043717rab5c9998.174Astyanax_mexicanus
ENSHCOG00000004662rab5c9790.783ENSBTAG00000006982RAB5C9989.401Bos_taurus
ENSHCOG00000004662rab5c9774.771WBGene00004268rab-59974.771Caenorhabditis_elegans
ENSHCOG00000004662rab5c9790.783ENSCAFG00000015629RAB5C9989.862Canis_familiaris
ENSHCOG00000004662rab5c9790.783ENSCAFG00020013537RAB5C9989.862Canis_lupus_dingo
ENSHCOG00000004662rab5c9790.783ENSCHIG00000012960RAB5C9989.401Capra_hircus
ENSHCOG00000004662rab5c9791.244ENSTSYG00000030531RAB5C9989.862Carlito_syrichta
ENSHCOG00000004662rab5c9790.783ENSCCAG00000025940RAB5C9989.401Cebus_capucinus
ENSHCOG00000004662rab5c9790.783ENSCATG00000040873RAB5C9989.862Cercocebus_atys
ENSHCOG00000004662rab5c9790.323ENSCLAG00000016650RAB5C9988.940Chinchilla_lanigera
ENSHCOG00000004662rab5c8094.972ENSCHOG00000009886RAB5C10094.972Choloepus_hoffmanni
ENSHCOG00000004662rab5c9774.886ENSCING00000003340-8682.888Ciona_intestinalis
ENSHCOG00000004662rab5c9775.330ENSCSAVG00000000613-9983.436Ciona_savignyi
ENSHCOG00000004662rab5c9790.783ENSCGRG00001014226Rab5c9989.401Cricetulus_griseus_chok1gshd
ENSHCOG00000004662rab5c9790.783ENSCGRG00000007534Rab5c9989.401Cricetulus_griseus_crigri
ENSHCOG00000004662rab5c9895.434ENSCSEG00000017024rab5c9995.434Cynoglossus_semilaevis
ENSHCOG00000004662rab5c9897.260ENSCVAG00000009550rab5c9997.260Cyprinodon_variegatus
ENSHCOG00000004662rab5c9790.783ENSDNOG00000038853RAB5C9988.940Dasypus_novemcinctus
ENSHCOG00000004662rab5c9791.705ENSDORG00000006819Rab5c9990.323Dipodomys_ordii
ENSHCOG00000004662rab5c8976.382FBgn0014010Rab58480.108Drosophila_melanogaster
ENSHCOG00000004662rab5c8386.631ENSEBUG00000014794rab5c8886.631Eptatretus_burgeri
ENSHCOG00000004662rab5c9790.783ENSEASG00005009281RAB5C9989.862Equus_asinus_asinus
ENSHCOG00000004662rab5c9791.244ENSECAG00000025054RAB5C9989.862Equus_caballus
ENSHCOG00000004662rab5c9790.783ENSEEUG00000002790RAB5C9989.401Erinaceus_europaeus
ENSHCOG00000004662rab5c9795.392ENSELUG00000018516rab5c9995.392Esox_lucius
ENSHCOG00000004662rab5c9990.950ENSELUG00000010439-10090.950Esox_lucius
ENSHCOG00000004662rab5c9790.783ENSFCAG00000002148RAB5C9989.401Felis_catus
ENSHCOG00000004662rab5c9789.862ENSFDAG00000021541RAB5C9988.479Fukomys_damarensis
ENSHCOG00000004662rab5c9892.273ENSFHEG00000015268-9992.273Fundulus_heteroclitus
ENSHCOG00000004662rab5c9897.717ENSFHEG00000012117rab5c9997.717Fundulus_heteroclitus
ENSHCOG00000004662rab5c9895.890ENSGMOG00000015096rab5c9995.890Gadus_morhua
ENSHCOG00000004662rab5c7588.690ENSGMOG00000001876-9788.690Gadus_morhua
ENSHCOG00000004662rab5c9391.905ENSGAFG00000003642-9989.238Gambusia_affinis
ENSHCOG00000004662rab5c9896.804ENSGAFG00000000884rab5c9996.804Gambusia_affinis
ENSHCOG00000004662rab5c9793.578ENSGACG00000008659rab5c9993.578Gasterosteus_aculeatus
ENSHCOG00000004662rab5c9790.783ENSGGOG00000005472RAB5C9989.862Gorilla_gorilla
ENSHCOG00000004662rab5c9591.080ENSHBUG00000006823-10089.686Haplochromis_burtoni
ENSHCOG00000004662rab5c9995.475ENSHBUG00000002014rab5c10095.475Haplochromis_burtoni
ENSHCOG00000004662rab5c9789.862ENSHGLG00000012067RAB5C9988.018Heterocephalus_glaber_female
ENSHCOG00000004662rab5c9196.059ENSIPUG00000020082rab5c10094.144Ictalurus_punctatus
ENSHCOG00000004662rab5c9790.323ENSSTOG00000006620RAB5C9989.401Ictidomys_tridecemlineatus
ENSHCOG00000004662rab5c9791.244ENSJJAG00000021181Rab5c9989.401Jaculus_jaculus
ENSHCOG00000004662rab5c9897.717ENSKMAG00000020038rab5c9997.717Kryptolebias_marmoratus
ENSHCOG00000004662rab5c9892.273ENSKMAG00000017417-9992.273Kryptolebias_marmoratus
ENSHCOG00000004662rab5c9898.174ENSLBEG00000004128rab5c9998.174Labrus_bergylta
ENSHCOG00000004662rab5c9891.855ENSLBEG00000010408-10091.855Labrus_bergylta
ENSHCOG00000004662rab5c9793.088ENSLOCG00000012566rab5c10092.166Lepisosteus_oculatus
ENSHCOG00000004662rab5c9790.783ENSMFAG00000039627RAB5C9989.862Macaca_fascicularis
ENSHCOG00000004662rab5c9790.783ENSMNEG00000000355RAB5C9989.862Macaca_nemestrina
ENSHCOG00000004662rab5c9896.804ENSMAMG00000022322rab5c9996.804Mastacembelus_armatus
ENSHCOG00000004662rab5c9892.760ENSMAMG00000016207-10092.760Mastacembelus_armatus
ENSHCOG00000004662rab5c9995.475ENSMZEG00005022735rab5c10095.475Maylandia_zebra
ENSHCOG00000004662rab5c9591.080ENSMZEG00005021090-10089.686Maylandia_zebra
ENSHCOG00000004662rab5c9791.244ENSMAUG00000015005Rab5c9989.862Mesocricetus_auratus
ENSHCOG00000004662rab5c9791.244ENSMICG00000041608RAB5C9989.862Microcebus_murinus
ENSHCOG00000004662rab5c9791.244ENSMOCG00000018531-9989.401Microtus_ochrogaster
ENSHCOG00000004662rab5c9796.789ENSMMOG00000020621rab5c9996.789Mola_mola
ENSHCOG00000004662rab5c9689.720ENSMALG00000006052rab5c9689.908Monopterus_albus
ENSHCOG00000004662rab5c9889.140ENSMALG00000022348-10089.140Monopterus_albus
ENSHCOG00000004662rab5c9791.244MGP_CAROLIEiJ_G0017184Rab5c9989.862Mus_caroli
ENSHCOG00000004662rab5c9791.244ENSMUSG00000019173Rab5c9989.862Mus_musculus
ENSHCOG00000004662rab5c9791.244MGP_PahariEiJ_G0018314Rab5c9989.862Mus_pahari
ENSHCOG00000004662rab5c9791.244MGP_SPRETEiJ_G0018027Rab5c9989.862Mus_spretus
ENSHCOG00000004662rab5c9790.783ENSMPUG00000010554RAB5C9989.862Mustela_putorius_furo
ENSHCOG00000004662rab5c9790.783ENSNGAG00000010286Rab5c9989.401Nannospalax_galili
ENSHCOG00000004662rab5c9591.080ENSNBRG00000016922-10089.686Neolamprologus_brichardi
ENSHCOG00000004662rab5c9996.380ENSNBRG00000018165rab5c10096.380Neolamprologus_brichardi
ENSHCOG00000004662rab5c8088.268ENSOPRG00000008255RAB5C10088.268Ochotona_princeps
ENSHCOG00000004662rab5c9789.862ENSODEG00000017920RAB5C9988.479Octodon_degus
ENSHCOG00000004662rab5c9896.347ENSONIG00000001113rab5c10095.475Oreochromis_niloticus
ENSHCOG00000004662rab5c9796.789ENSORLG00000003882rab5c9996.789Oryzias_latipes
ENSHCOG00000004662rab5c9796.789ENSORLG00020008388rab5c9996.789Oryzias_latipes_hni
ENSHCOG00000004662rab5c9796.789ENSORLG00015021900rab5c9996.789Oryzias_latipes_hsok
ENSHCOG00000004662rab5c9796.789ENSOMEG00000023078rab5c9996.789Oryzias_melastigma
ENSHCOG00000004662rab5c9791.244ENSOGAG00000009456RAB5C9989.862Otolemur_garnettii
ENSHCOG00000004662rab5c9790.783ENSOARG00000018768RAB5C9989.401Ovis_aries
ENSHCOG00000004662rab5c9790.783ENSPPAG00000037206RAB5C9989.862Pan_paniscus
ENSHCOG00000004662rab5c9790.783ENSPPRG00000005745RAB5C9989.401Panthera_pardus
ENSHCOG00000004662rab5c9790.783ENSPTIG00000008177RAB5C9989.401Panthera_tigris_altaica
ENSHCOG00000004662rab5c9790.783ENSPTRG00000009194RAB5C9989.862Pan_troglodytes
ENSHCOG00000004662rab5c9789.401ENSPKIG00000001237-9988.018Paramormyrops_kingsleyae
ENSHCOG00000004662rab5c9788.018ENSPKIG00000020112-9988.018Paramormyrops_kingsleyae
ENSHCOG00000004662rab5c9893.151ENSPMGG00000010792rab5c9993.981Periophthalmus_magnuspinnatus
ENSHCOG00000004662rab5c9791.244ENSPEMG00000017971Rab5c9989.401Peromyscus_maniculatus_bairdii
ENSHCOG00000004662rab5c9775.688ENSPMAG00000007867rab5c8983.069Petromyzon_marinus
ENSHCOG00000004662rab5c9778.733ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSHCOG00000004662rab5c9776.147ENSPMAG00000001399rab5c9976.498Petromyzon_marinus
ENSHCOG00000004662rab5c9790.783ENSPCIG00000020225-9989.862Phascolarctos_cinereus
ENSHCOG00000004662rab5c9891.364ENSPLAG00000016333-10091.364Poecilia_latipinna
ENSHCOG00000004662rab5c9896.804ENSPLAG00000004790rab5c9996.804Poecilia_latipinna
ENSHCOG00000004662rab5c9592.523ENSPMEG00000012614-9990.991Poecilia_mexicana
ENSHCOG00000004662rab5c9896.804ENSPMEG00000011336rab5c9996.804Poecilia_mexicana
ENSHCOG00000004662rab5c8492.632ENSPREG00000022167-8994.022Poecilia_reticulata
ENSHCOG00000004662rab5c9896.804ENSPREG00000010146rab5c9996.804Poecilia_reticulata
ENSHCOG00000004662rab5c9790.783ENSPPYG00000008398RAB5C9989.862Pongo_abelii
ENSHCOG00000004662rab5c9789.862ENSPCAG00000016412RAB5C9988.479Procavia_capensis
ENSHCOG00000004662rab5c9790.783ENSPCOG00000026327RAB5C9989.401Propithecus_coquereli
ENSHCOG00000004662rab5c9791.244ENSPVAG00000003867RAB5C9989.862Pteropus_vampyrus
ENSHCOG00000004662rab5c9591.080ENSPNYG00000015851-10089.686Pundamilia_nyererei
ENSHCOG00000004662rab5c9995.475ENSPNYG00000010615rab5c10095.475Pundamilia_nyererei
ENSHCOG00000004662rab5c9787.215ENSPNAG00000002218-9987.215Pygocentrus_nattereri
ENSHCOG00000004662rab5c9897.717ENSPNAG00000028138rab5c10096.833Pygocentrus_nattereri
ENSHCOG00000004662rab5c9791.244ENSRNOG00000018568Rab5c9989.862Rattus_norvegicus
ENSHCOG00000004662rab5c9790.783ENSRBIG00000031376RAB5C9989.862Rhinopithecus_bieti
ENSHCOG00000004662rab5c9790.783ENSRROG00000032895RAB5C9989.862Rhinopithecus_roxellana
ENSHCOG00000004662rab5c9790.783ENSSBOG00000032552-9989.401Saimiri_boliviensis_boliviensis
ENSHCOG00000004662rab5c9791.244ENSSHAG00000005267-9990.323Sarcophilus_harrisii
ENSHCOG00000004662rab5c10086.607ENSSFOG00015009988-10086.607Scleropages_formosus
ENSHCOG00000004662rab5c9497.143ENSSMAG00000007323rab5c10095.023Scophthalmus_maximus
ENSHCOG00000004662rab5c9896.804ENSSDUG00000023008rab5c9996.804Seriola_dumerili
ENSHCOG00000004662rab5c9895.890ENSSLDG00000017771rab5c10095.023Seriola_lalandi_dorsalis
ENSHCOG00000004662rab5c9791.244ENSSPUG00000012950-9989.862Sphenodon_punctatus
ENSHCOG00000004662rab5c9897.717ENSSPAG00000006436rab5c9997.717Stegastes_partitus
ENSHCOG00000004662rab5c9790.783ENSSSCG00000032467RAB5C9989.401Sus_scrofa
ENSHCOG00000004662rab5c9895.890ENSTRUG00000015590rab5c10095.023Takifugu_rubripes
ENSHCOG00000004662rab5c9596.698ENSTNIG00000011711rab5c9596.698Tetraodon_nigroviridis
ENSHCOG00000004662rab5c9790.783ENSTBEG00000007092RAB5C9989.862Tupaia_belangeri
ENSHCOG00000004662rab5c9790.323ENSTTRG00000006673RAB5C9988.479Tursiops_truncatus
ENSHCOG00000004662rab5c9790.783ENSUAMG00000024343RAB5C9989.862Ursus_americanus
ENSHCOG00000004662rab5c9790.783ENSUMAG00000023270RAB5C9989.862Ursus_maritimus
ENSHCOG00000004662rab5c9392.857ENSXCOG00000006300-9990.135Xiphophorus_couchianus
ENSHCOG00000004662rab5c9896.804ENSXCOG00000016788rab5c9996.804Xiphophorus_couchianus
ENSHCOG00000004662rab5c9890.909ENSXMAG00000022179-10090.909Xiphophorus_maculatus
ENSHCOG00000004662rab5c9896.804ENSXMAG00000003266rab5c9996.804Xiphophorus_maculatus

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