EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000004812 (Gene tree)
Gene ID: -
Gene Symbol: aff2
Alias: si:ch211-76h4.1
Full Name: AF4/FMR2 family%2C member 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 88208 bases
Position: chrKV880218.1:4740659-4828866
Accession: ZDB-GENE-110411-190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003453	AF-4	PF05110.13	7.7e-253	1	3
ENSHCOP00000003453	AF-4	PF05110.13	7.7e-253	2	3
ENSHCOP00000003453	AF-4	PF05110.13	7.7e-253	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008714	-	2541	-	ENSHCOP00000003453	846 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000004812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000004812	aff2	58	46.774	ENSHCOG00000016280	aff4	51	41.350

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004812	aff2	97	40.816	ENSG00000144218	AFF3	91	59.890	Homo_sapiens
ENSHCOG00000004812	aff2	61	89.130	ENSAPOG00000021895	-	64	89.130	Acanthochromis_polyacanthus
ENSHCOG00000004812	aff2	68	46.774	ENSAPOG00000006096	aff4	71	40.835	Acanthochromis_polyacanthus
ENSHCOG00000004812	aff2	99	59.777	ENSACIG00000022732	aff2	99	61.154	Amphilophus_citrinellus
ENSHCOG00000004812	aff2	60	35.636	ENSACIG00000010525	aff4	58	36.659	Amphilophus_citrinellus
ENSHCOG00000004812	aff2	99	57.900	ENSAPEG00000015300	aff2	99	59.765	Amphiprion_percula
ENSHCOG00000004812	aff2	61	72.692	ENSAPLG00000003660	-	64	71.318	Anas_platyrhynchos
ENSHCOG00000004812	aff2	76	50.769	ENSACAG00000010688	AFF2	56	53.409	Anolis_carolinensis
ENSHCOG00000004812	aff2	63	57.692	ENSACLG00000002905	-	50	57.692	Astatotilapia_calliptera
ENSHCOG00000004812	aff2	91	91.304	ENSACLG00000021630	aff2	50	80.992	Astatotilapia_calliptera
ENSHCOG00000004812	aff2	80	71.429	ENSAMXG00000000387	aff2	55	88.462	Astyanax_mexicanus
ENSHCOG00000004812	aff2	68	46.774	ENSAMXG00000020137	aff4	68	42.163	Astyanax_mexicanus
ENSHCOG00000004812	aff2	84	43.347	ENSCAPG00000012999	AFF3	53	62.800	Cavia_aperea
ENSHCOG00000004812	aff2	72	85.366	ENSCAPG00000004010	AFF2	66	85.366	Cavia_aperea
ENSHCOG00000004812	aff2	88	43.983	ENSCPOG00000006346	AFF3	76	61.538	Cavia_porcellus
ENSHCOG00000004812	aff2	60	50.000	ENSCPOG00000001814	AFF4	61	50.000	Cavia_porcellus
ENSHCOG00000004812	aff2	85	69.170	ENSCCAG00000025994	AFF2	53	71.134	Cebus_capucinus
ENSHCOG00000004812	aff2	88	43.918	ENSCLAG00000017100	AFF3	74	64.000	Chinchilla_lanigera
ENSHCOG00000004812	aff2	90	41.356	ENSCPBG00000007277	AFF3	57	68.831	Chrysemys_picta_bellii
ENSHCOG00000004812	aff2	87	77.419	ENSCPBG00000020831	AFF2	61	77.419	Chrysemys_picta_bellii
ENSHCOG00000004812	aff2	88	68.775	ENSCGRG00001012965	Aff2	53	71.134	Cricetulus_griseus_chok1gshd
ENSHCOG00000004812	aff2	87	68.775	ENSCGRG00000000059	Aff2	53	77.647	Cricetulus_griseus_crigri
ENSHCOG00000004812	aff2	74	40.440	ENSCGRG00000003408	Aff3	74	65.333	Cricetulus_griseus_crigri
ENSHCOG00000004812	aff2	88	78.884	ENSCVAG00000011467	aff2	98	82.869	Cyprinodon_variegatus
ENSHCOG00000004812	aff2	59	45.902	ENSDARG00000001857	aff4	51	42.984	Danio_rerio
ENSHCOG00000004812	aff2	94	52.843	ENSDARG00000052242	aff2	61	79.570	Danio_rerio
ENSHCOG00000004812	aff2	72	64.935	ENSDORG00000007294	Aff3	74	64.000	Dipodomys_ordii
ENSHCOG00000004812	aff2	76	69.170	ENSEEUG00000015356	AFF2	54	67.589	Erinaceus_europaeus
ENSHCOG00000004812	aff2	91	60.000	ENSELUG00000013368	aff2	59	78.495	Esox_lucius
ENSHCOG00000004812	aff2	56	67.416	ENSFALG00000012089	AFF2	57	51.685	Ficedula_albicollis
ENSHCOG00000004812	aff2	92	59.930	ENSFHEG00000022097	aff2	92	60.384	Fundulus_heteroclitus
ENSHCOG00000004812	aff2	51	40.421	ENSGMOG00000008803	aff4	65	41.772	Gadus_morhua
ENSHCOG00000004812	aff2	91	76.344	ENSGALG00000009168	AFF2	58	76.344	Gallus_gallus
ENSHCOG00000004812	aff2	58	89.130	ENSGAFG00000015508	aff2	61	89.130	Gambusia_affinis
ENSHCOG00000004812	aff2	62	38.959	ENSGACG00000020734	aff4	72	38.113	Gasterosteus_aculeatus
ENSHCOG00000004812	aff2	80	33.477	ENSGACG00000016333	-	50	51.786	Gasterosteus_aculeatus
ENSHCOG00000004812	aff2	61	45.910	ENSGAGG00000016287	-	73	45.896	Gopherus_agassizii
ENSHCOG00000004812	aff2	51	36.207	ENSGGOG00000011786	AFF4	78	40.523	Gorilla_gorilla
ENSHCOG00000004812	aff2	76	91.304	ENSHBUG00000012447	aff2	75	63.519	Haplochromis_burtoni
ENSHCOG00000004812	aff2	52	69.170	ENSHGLG00100010140	AFF2	55	67.984	Heterocephalus_glaber_male
ENSHCOG00000004812	aff2	95	51.581	ENSIPUG00000014592	aff2	61	78.723	Ictalurus_punctatus
ENSHCOG00000004812	aff2	79	42.194	ENSIPUG00000011689	aff4	68	42.977	Ictalurus_punctatus
ENSHCOG00000004812	aff2	97	41.806	ENSSTOG00000012140	AFF3	69	64.000	Ictidomys_tridecemlineatus
ENSHCOG00000004812	aff2	60	51.316	ENSSTOG00000026695	AFF4	61	51.316	Ictidomys_tridecemlineatus
ENSHCOG00000004812	aff2	97	39.932	ENSJJAG00000013155	Aff3	74	62.667	Jaculus_jaculus
ENSHCOG00000004812	aff2	75	86.957	ENSKMAG00000006510	aff2	53	86.957	Kryptolebias_marmoratus
ENSHCOG00000004812	aff2	56	39.208	ENSKMAG00000010443	aff4	69	38.391	Kryptolebias_marmoratus
ENSHCOG00000004812	aff2	56	68.939	ENSLBEG00000014344	aff2	52	68.939	Labrus_bergylta
ENSHCOG00000004812	aff2	61	38.798	ENSLBEG00000017778	aff4	71	39.706	Labrus_bergylta
ENSHCOG00000004812	aff2	68	50.649	ENSLACG00000007303	AFF1	50	50.649	Latimeria_chalumnae
ENSHCOG00000004812	aff2	60	70.881	ENSLACG00000010860	aff2	62	74.713	Latimeria_chalumnae
ENSHCOG00000004812	aff2	83	78.261	ENSLOCG00000015403	aff2	53	78.261	Lepisosteus_oculatus
ENSHCOG00000004812	aff2	86	69.170	ENSLAFG00000018691	AFF2	82	58.993	Loxodonta_africana
ENSHCOG00000004812	aff2	60	51.316	ENSMMUG00000015640	AFF4	78	40.693	Macaca_mulatta
ENSHCOG00000004812	aff2	60	82.609	ENSMAMG00000000756	aff2	66	80.435	Mastacembelus_armatus
ENSHCOG00000004812	aff2	69	46.032	ENSMAMG00000021453	aff4	53	40.449	Mastacembelus_armatus
ENSHCOG00000004812	aff2	61	91.304	ENSMZEG00005005490	aff2	59	74.142	Maylandia_zebra
ENSHCOG00000004812	aff2	97	67.321	ENSMMOG00000010019	aff2	87	68.807	Mola_mola
ENSHCOG00000004812	aff2	67	83.673	ENSMALG00000012531	aff2	52	81.633	Monopterus_albus
ENSHCOG00000004812	aff2	88	68.775	MGP_CAROLIEiJ_G0033123	Aff2	53	68.932	Mus_caroli
ENSHCOG00000004812	aff2	78	70.408	ENSMUSG00000031189	Aff2	52	67.290	Mus_musculus
ENSHCOG00000004812	aff2	65	61.600	ENSMUSG00000037138	Aff3	63	65.333	Mus_musculus
ENSHCOG00000004812	aff2	78	70.408	MGP_SPRETEiJ_G0034278	Aff2	52	67.290	Mus_spretus
ENSHCOG00000004812	aff2	97	38.917	ENSNGAG00000002408	Aff3	63	64.000	Nannospalax_galili
ENSHCOG00000004812	aff2	85	69.170	ENSODEG00000009737	AFF2	53	72.165	Octodon_degus
ENSHCOG00000004812	aff2	85	88.073	ENSONIG00000015816	aff2	57	89.328	Oreochromis_niloticus
ENSHCOG00000004812	aff2	63	79.412	ENSOANG00000013624	AFF1	50	66.667	Ornithorhynchus_anatinus
ENSHCOG00000004812	aff2	61	39.464	ENSOANG00000004623	-	68	42.062	Ornithorhynchus_anatinus
ENSHCOG00000004812	aff2	59	71.429	ENSOANG00000001095	-	57	75.000	Ornithorhynchus_anatinus
ENSHCOG00000004812	aff2	83	64.935	ENSOCUG00000009532	AFF3	53	64.935	Oryctolagus_cuniculus
ENSHCOG00000004812	aff2	90	83.333	ENSORLG00000009121	aff2	53	76.429	Oryzias_latipes
ENSHCOG00000004812	aff2	59	39.394	ENSORLG00000001361	aff4	64	42.222	Oryzias_latipes
ENSHCOG00000004812	aff2	90	83.333	ENSORLG00020020225	aff2	53	76.429	Oryzias_latipes_hni
ENSHCOG00000004812	aff2	59	39.394	ENSORLG00020020601	aff4	64	42.222	Oryzias_latipes_hni
ENSHCOG00000004812	aff2	59	38.547	ENSORLG00015004684	aff4	65	41.649	Oryzias_latipes_hsok
ENSHCOG00000004812	aff2	90	82.979	ENSORLG00015015278	aff2	53	75.000	Oryzias_latipes_hsok
ENSHCOG00000004812	aff2	89	38.547	ENSOMEG00000005078	aff4	65	41.830	Oryzias_melastigma
ENSHCOG00000004812	aff2	93	73.571	ENSOMEG00000017218	aff2	61	73.571	Oryzias_melastigma
ENSHCOG00000004812	aff2	83	64.935	ENSOGAG00000013262	AFF3	54	64.935	Otolemur_garnettii
ENSHCOG00000004812	aff2	60	51.316	ENSPPAG00000043255	AFF4	81	40.733	Pan_paniscus
ENSHCOG00000004812	aff2	60	51.316	ENSPTRG00000046486	-	81	40.733	Pan_troglodytes
ENSHCOG00000004812	aff2	60	51.316	ENSPTRG00000017228	AFF4	81	40.733	Pan_troglodytes
ENSHCOG00000004812	aff2	64	73.171	ENSPTRG00000016255	AFF1	55	73.171	Pan_troglodytes
ENSHCOG00000004812	aff2	72	76.923	ENSPKIG00000001556	aff2	54	55.056	Paramormyrops_kingsleyae
ENSHCOG00000004812	aff2	61	47.945	ENSPSIG00000010309	AFF2	73	48.199	Pelodiscus_sinensis
ENSHCOG00000004812	aff2	56	38.710	ENSPMGG00000006477	aff4	83	41.921	Periophthalmus_magnuspinnatus
ENSHCOG00000004812	aff2	92	53.137	ENSPMGG00000003738	AFF2	87	77.778	Periophthalmus_magnuspinnatus
ENSHCOG00000004812	aff2	97	39.799	ENSPEMG00000014802	Aff3	74	66.667	Peromyscus_maniculatus_bairdii
ENSHCOG00000004812	aff2	93	59.091	ENSPLAG00000005101	aff2	85	60.690	Poecilia_latipinna
ENSHCOG00000004812	aff2	61	77.778	ENSPMEG00000005677	aff2	71	68.947	Poecilia_mexicana
ENSHCOG00000004812	aff2	98	56.023	ENSPREG00000003285	aff2	81	59.744	Poecilia_reticulata
ENSHCOG00000004812	aff2	83	64.935	ENSPCOG00000016986	AFF3	57	71.053	Propithecus_coquereli
ENSHCOG00000004812	aff2	91	79.839	ENSPNYG00000000046	aff2	66	79.839	Pundamilia_nyererei
ENSHCOG00000004812	aff2	90	63.359	ENSPNAG00000005945	aff2	61	79.570	Pygocentrus_nattereri
ENSHCOG00000004812	aff2	68	46.774	ENSPNAG00000004777	aff4	51	46.774	Pygocentrus_nattereri
ENSHCOG00000004812	aff2	60	51.316	ENSRROG00000033812	AFF4	60	40.517	Rhinopithecus_roxellana
ENSHCOG00000004812	aff2	67	55.738	ENSSHAG00000004203	AFF1	50	53.846	Sarcophilus_harrisii
ENSHCOG00000004812	aff2	77	40.000	ENSSHAG00000013198	AFF4	54	48.101	Sarcophilus_harrisii
ENSHCOG00000004812	aff2	93	42.574	ENSSHAG00000009556	AFF2	58	76.344	Sarcophilus_harrisii
ENSHCOG00000004812	aff2	61	40.367	ENSSFOG00015000846	AFF4	82	41.474	Scleropages_formosus
ENSHCOG00000004812	aff2	87	38.686	ENSSFOG00015018646	aff4	68	39.416	Scleropages_formosus
ENSHCOG00000004812	aff2	72	75.269	ENSSFOG00015004020	aff2	54	75.269	Scleropages_formosus
ENSHCOG00000004812	aff2	92	86.957	ENSSMAG00000013634	aff2	55	86.957	Scophthalmus_maximus
ENSHCOG00000004812	aff2	61	85.714	ENSSLDG00000022303	aff2	67	85.714	Seriola_lalandi_dorsalis
ENSHCOG00000004812	aff2	68	54.878	ENSSPUG00000001574	AFF1	50	54.878	Sphenodon_punctatus
ENSHCOG00000004812	aff2	60	38.609	ENSSPUG00000009604	AFF3	71	38.435	Sphenodon_punctatus
ENSHCOG00000004812	aff2	79	66.592	ENSSPAG00000010160	-	77	66.592	Stegastes_partitus
ENSHCOG00000004812	aff2	61	39.526	ENSSPAG00000012370	aff4	68	40.441	Stegastes_partitus
ENSHCOG00000004812	aff2	68	48.387	ENSTRUG00000008087	aff4	51	48.387	Takifugu_rubripes
ENSHCOG00000004812	aff2	68	50.000	ENSTNIG00000018201	aff4	70	40.367	Tetraodon_nigroviridis
ENSHCOG00000004812	aff2	69	77.907	ENSUMAG00000009395	AFF2	57	77.907	Ursus_maritimus
ENSHCOG00000004812	aff2	84	81.176	ENSXETG00000019630	aff2	60	81.176	Xenopus_tropicalis
ENSHCOG00000004812	aff2	68	92.683	ENSXCOG00000013338	aff2	80	57.944	Xiphophorus_couchianus
ENSHCOG00000004812	aff2	91	80.992	ENSXMAG00000015826	aff2	59	80.992	Xiphophorus_maculatus