EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000004862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 417 bases
Position: chrKV880526.1:117001-117417
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003512	SM-ATX	PF14438.6	8.3e-08	1	1
ENSHCOP00000003512	LSM14	PF12701.7	3.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008614	-	330	-	ENSHCOP00000003512	109 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000004862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000004862	-	73	72.500	ENSHCOG00000009227	-	79	72.500
ENSHCOG00000004862	-	77	76.190	ENSHCOG00000001089	-	84	76.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004862	-	82	59.551	ENSAPOG00000009997	-	82	59.551	Acanthochromis_polyacanthus
ENSHCOG00000004862	-	83	63.736	ENSACIG00000003134	-	74	63.736	Amphilophus_citrinellus
ENSHCOG00000004862	-	83	62.222	ENSAPEG00000013779	-	89	62.222	Amphiprion_percula
ENSHCOG00000004862	-	71	64.935	ENSATEG00000015882	-	88	64.935	Anabas_testudineus
ENSHCOG00000004862	-	87	89.474	ENSCVAG00000005570	-	98	89.474	Cyprinodon_variegatus
ENSHCOG00000004862	-	83	64.835	ENSCVAG00000012411	-	94	64.835	Cyprinodon_variegatus
ENSHCOG00000004862	-	83	62.637	ENSGAFG00000013718	-	94	62.637	Gambusia_affinis
ENSHCOG00000004862	-	83	63.736	ENSHBUG00000012323	-	87	63.736	Haplochromis_burtoni
ENSHCOG00000004862	-	86	89.362	ENSHBUG00000011864	-	71	89.362	Haplochromis_burtoni
ENSHCOG00000004862	-	83	62.637	ENSKMAG00000012850	-	94	62.637	Kryptolebias_marmoratus
ENSHCOG00000004862	-	78	60.000	ENSKMAG00000016674	-	86	58.333	Kryptolebias_marmoratus
ENSHCOG00000004862	-	83	67.033	ENSLBEG00000007971	-	88	67.033	Labrus_bergylta
ENSHCOG00000004862	-	84	88.043	ENSLBEG00000016427	lsm14b	64	88.043	Labrus_bergylta
ENSHCOG00000004862	-	93	71.845	ENSNGAG00000016305	-	82	71.845	Nannospalax_galili
ENSHCOG00000004862	-	86	89.362	ENSNBRG00000022606	-	71	89.362	Neolamprologus_brichardi
ENSHCOG00000004862	-	83	64.835	ENSNBRG00000022370	-	87	64.835	Neolamprologus_brichardi
ENSHCOG00000004862	-	83	65.217	ENSORLG00020018184	-	94	65.217	Oryzias_latipes_hni
ENSHCOG00000004862	-	69	64.000	ENSOMEG00000007241	-	90	64.000	Oryzias_melastigma
ENSHCOG00000004862	-	85	76.344	ENSPKIG00000003275	lsm14b	86	76.344	Paramormyrops_kingsleyae
ENSHCOG00000004862	-	69	57.333	ENSPMGG00000004595	-	76	57.333	Periophthalmus_magnuspinnatus
ENSHCOG00000004862	-	89	85.567	ENSPMGG00000014569	lsm14b	59	85.567	Periophthalmus_magnuspinnatus
ENSHCOG00000004862	-	86	86.170	ENSPREG00000016484	-	61	86.170	Poecilia_reticulata
ENSHCOG00000004862	-	72	62.821	ENSPREG00000007817	-	90	62.821	Poecilia_reticulata
ENSHCOG00000004862	-	86	89.362	ENSPNYG00000019601	-	71	89.362	Pundamilia_nyererei
ENSHCOG00000004862	-	83	63.736	ENSPNYG00000021706	-	86	63.736	Pundamilia_nyererei
ENSHCOG00000004862	-	73	65.000	ENSSLDG00000012686	-	87	65.000	Seriola_lalandi_dorsalis
ENSHCOG00000004862	-	81	85.227	ENSSLDG00000011706	-	96	85.227	Seriola_lalandi_dorsalis
ENSHCOG00000004862	-	73	65.000	ENSSLDG00000011341	-	87	65.000	Seriola_lalandi_dorsalis
ENSHCOG00000004862	-	82	64.045	ENSSPAG00000018837	-	88	64.045	Stegastes_partitus
ENSHCOG00000004862	-	91	84.848	ENSXCOG00000017365	-	100	84.848	Xiphophorus_couchianus
ENSHCOG00000004862	-	74	59.259	ENSXCOG00000011423	-	89	59.259	Xiphophorus_couchianus
ENSHCOG00000004862	-	74	59.259	ENSXMAG00000015481	-	89	59.259	Xiphophorus_maculatus