EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000004871 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 28181 bases
Position: chrKV880150.1:4736245-4764425
Accession: 109522599
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003519	THUMP	PF02926.17	3.9e-10	1	1
ENSHCOP00000003519	UPF0020	PF01170.18	2.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008590	-	1912	XM_019881305	ENSHCOP00000003519	476 (aa)	XP_019736864	UPI00094E889F

Gene Model

Click here to download ENSHCOG00000004871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000004871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000004871	thumpd3	95	56.000	ENSG00000134077	THUMPD3	92	57.021	Homo_sapiens
ENSHCOG00000004871	thumpd3	97	81.087	ENSAPOG00000015836	thumpd3	94	81.087	Acanthochromis_polyacanthus
ENSHCOG00000004871	thumpd3	95	58.298	ENSAMEG00000011321	THUMPD3	92	57.447	Ailuropoda_melanoleuca
ENSHCOG00000004871	thumpd3	99	78.224	ENSACIG00000020096	thumpd3	95	77.801	Amphilophus_citrinellus
ENSHCOG00000004871	thumpd3	97	81.425	ENSAOCG00000004399	thumpd3	93	81.210	Amphiprion_ocellaris
ENSHCOG00000004871	thumpd3	97	80.994	ENSAPEG00000016740	thumpd3	93	80.994	Amphiprion_percula
ENSHCOG00000004871	thumpd3	97	79.870	ENSATEG00000005345	thumpd3	93	79.870	Anabas_testudineus
ENSHCOG00000004871	thumpd3	79	58.145	ENSAPLG00000003598	THUMPD3	99	59.439	Anas_platyrhynchos
ENSHCOG00000004871	thumpd3	91	59.322	ENSACAG00000014974	THUMPD3	91	59.534	Anolis_carolinensis
ENSHCOG00000004871	thumpd3	95	55.579	ENSANAG00000002365	THUMPD3	93	56.170	Aotus_nancymaae
ENSHCOG00000004871	thumpd3	87	53.995	ENSACLG00000013504	-	87	53.398	Astatotilapia_calliptera
ENSHCOG00000004871	thumpd3	99	77.848	ENSACLG00000023333	thumpd3	95	77.378	Astatotilapia_calliptera
ENSHCOG00000004871	thumpd3	96	71.367	ENSAMXG00000015683	thumpd3	97	71.367	Astyanax_mexicanus
ENSHCOG00000004871	thumpd3	93	59.957	ENSBTAG00000003112	THUMPD3	91	59.957	Bos_taurus
ENSHCOG00000004871	thumpd3	89	35.765	WBGene00010846	M04B2.2	96	34.824	Caenorhabditis_elegans
ENSHCOG00000004871	thumpd3	93	55.388	ENSCJAG00000015949	THUMPD3	91	56.466	Callithrix_jacchus
ENSHCOG00000004871	thumpd3	95	58.475	ENSCAFG00000005499	THUMPD3	92	57.627	Canis_familiaris
ENSHCOG00000004871	thumpd3	77	57.552	ENSCAFG00000008060	-	93	56.510	Canis_familiaris
ENSHCOG00000004871	thumpd3	85	57.311	ENSCAFG00020025887	-	96	56.368	Canis_lupus_dingo
ENSHCOG00000004871	thumpd3	95	58.475	ENSCAFG00020008895	-	92	57.627	Canis_lupus_dingo
ENSHCOG00000004871	thumpd3	92	60.307	ENSCHIG00000024037	THUMPD3	90	59.436	Capra_hircus
ENSHCOG00000004871	thumpd3	93	57.569	ENSTSYG00000000159	THUMPD3	92	57.173	Carlito_syrichta
ENSHCOG00000004871	thumpd3	87	40.191	ENSCAPG00000017486	THUMPD3	83	40.952	Cavia_aperea
ENSHCOG00000004871	thumpd3	93	57.424	ENSCPOG00000033287	THUMPD3	91	57.205	Cavia_porcellus
ENSHCOG00000004871	thumpd3	95	50.638	ENSCCAG00000021429	-	94	51.747	Cebus_capucinus
ENSHCOG00000004871	thumpd3	95	55.789	ENSCCAG00000027067	-	93	56.596	Cebus_capucinus
ENSHCOG00000004871	thumpd3	95	56.211	ENSCATG00000040999	THUMPD3	93	56.025	Cercocebus_atys
ENSHCOG00000004871	thumpd3	95	57.563	ENSCLAG00000000690	THUMPD3	93	57.537	Chinchilla_lanigera
ENSHCOG00000004871	thumpd3	95	56.421	ENSCSAG00000010753	THUMPD3	93	56.448	Chlorocebus_sabaeus
ENSHCOG00000004871	thumpd3	83	47.970	ENSCHOG00000012851	THUMPD3	78	47.232	Choloepus_hoffmanni
ENSHCOG00000004871	thumpd3	91	59.524	ENSCPBG00000014771	THUMPD3	92	59.615	Chrysemys_picta_bellii
ENSHCOG00000004871	thumpd3	92	41.648	ENSCSAVG00000008668	-	97	40.961	Ciona_savignyi
ENSHCOG00000004871	thumpd3	95	56.211	ENSCANG00000031901	THUMPD3	93	56.237	Colobus_angolensis_palliatus
ENSHCOG00000004871	thumpd3	92	58.606	ENSCGRG00001024117	Thumpd3	90	57.298	Cricetulus_griseus_chok1gshd
ENSHCOG00000004871	thumpd3	92	58.606	ENSCGRG00000018116	Thumpd3	90	57.298	Cricetulus_griseus_crigri
ENSHCOG00000004871	thumpd3	96	77.440	ENSCSEG00000002546	thumpd3	95	77.007	Cynoglossus_semilaevis
ENSHCOG00000004871	thumpd3	97	76.660	ENSCVAG00000001019	thumpd3	92	76.660	Cyprinodon_variegatus
ENSHCOG00000004871	thumpd3	96	65.598	ENSDARG00000059634	thumpd3	97	65.598	Danio_rerio
ENSHCOG00000004871	thumpd3	95	56.900	ENSDNOG00000047668	THUMPD3	91	58.386	Dasypus_novemcinctus
ENSHCOG00000004871	thumpd3	91	58.079	ENSDORG00000003257	Thumpd3	90	58.297	Dipodomys_ordii
ENSHCOG00000004871	thumpd3	60	56.436	ENSETEG00000020239	-	60	55.776	Echinops_telfairi
ENSHCOG00000004871	thumpd3	90	53.394	ENSEBUG00000004221	thumpd3	97	52.608	Eptatretus_burgeri
ENSHCOG00000004871	thumpd3	95	56.000	ENSEASG00005013327	THUMPD3	92	56.000	Equus_asinus_asinus
ENSHCOG00000004871	thumpd3	95	57.684	ENSECAG00000002016	THUMPD3	92	57.684	Equus_caballus
ENSHCOG00000004871	thumpd3	76	30.052	ENSEEUG00000000105	THUMPD2	85	30.179	Erinaceus_europaeus
ENSHCOG00000004871	thumpd3	95	54.237	ENSEEUG00000014696	THUMPD3	92	53.602	Erinaceus_europaeus
ENSHCOG00000004871	thumpd3	84	84.286	ENSELUG00000018246	thumpd3	71	84.286	Esox_lucius
ENSHCOG00000004871	thumpd3	92	59.382	ENSFCAG00000006171	THUMPD3	90	58.057	Felis_catus
ENSHCOG00000004871	thumpd3	85	57.011	ENSFALG00000013631	THUMPD3	90	56.148	Ficedula_albicollis
ENSHCOG00000004871	thumpd3	92	57.174	ENSFDAG00000014825	THUMPD3	90	57.802	Fukomys_damarensis
ENSHCOG00000004871	thumpd3	97	78.112	ENSFHEG00000006006	thumpd3	93	78.419	Fundulus_heteroclitus
ENSHCOG00000004871	thumpd3	98	69.677	ENSGMOG00000007923	thumpd3	95	69.002	Gadus_morhua
ENSHCOG00000004871	thumpd3	91	57.634	ENSGALG00000044813	THUMPD3	94	57.204	Gallus_gallus
ENSHCOG00000004871	thumpd3	97	77.682	ENSGAFG00000021645	thumpd3	93	77.419	Gambusia_affinis
ENSHCOG00000004871	thumpd3	97	75.974	ENSGACG00000000930	thumpd3	98	75.974	Gasterosteus_aculeatus
ENSHCOG00000004871	thumpd3	91	59.179	ENSGAGG00000022750	THUMPD3	92	59.488	Gopherus_agassizii
ENSHCOG00000004871	thumpd3	95	56.000	ENSGGOG00000000604	THUMPD3	92	56.025	Gorilla_gorilla
ENSHCOG00000004871	thumpd3	99	77.637	ENSHBUG00000013405	thumpd3	95	77.167	Haplochromis_burtoni
ENSHCOG00000004871	thumpd3	96	55.136	ENSHGLG00000016200	THUMPD3	93	55.158	Heterocephalus_glaber_female
ENSHCOG00000004871	thumpd3	93	49.460	ENSHGLG00100000505	-	94	49.782	Heterocephalus_glaber_male
ENSHCOG00000004871	thumpd3	96	55.230	ENSHGLG00100017321	-	93	55.391	Heterocephalus_glaber_male
ENSHCOG00000004871	thumpd3	97	69.546	ENSIPUG00000019415	THUMPD3	96	68.898	Ictalurus_punctatus
ENSHCOG00000004871	thumpd3	94	58.963	ENSSTOG00000003973	THUMPD3	92	58.315	Ictidomys_tridecemlineatus
ENSHCOG00000004871	thumpd3	98	53.222	ENSJJAG00000017751	Thumpd3	94	52.588	Jaculus_jaculus
ENSHCOG00000004871	thumpd3	97	78.664	ENSKMAG00000021025	thumpd3	88	78.879	Kryptolebias_marmoratus
ENSHCOG00000004871	thumpd3	98	79.274	ENSLBEG00000012252	thumpd3	94	79.274	Labrus_bergylta
ENSHCOG00000004871	thumpd3	95	58.562	ENSLACG00000018604	THUMPD3	93	58.985	Latimeria_chalumnae
ENSHCOG00000004871	thumpd3	96	61.176	ENSLOCG00000009800	thumpd3	95	64.301	Lepisosteus_oculatus
ENSHCOG00000004871	thumpd3	93	58.584	ENSLAFG00000005103	THUMPD3	91	59.002	Loxodonta_africana
ENSHCOG00000004871	thumpd3	94	56.809	ENSMFAG00000044884	THUMPD3	92	56.838	Macaca_fascicularis
ENSHCOG00000004871	thumpd3	94	56.809	ENSMMUG00000017307	THUMPD3	92	56.838	Macaca_mulatta
ENSHCOG00000004871	thumpd3	94	56.809	ENSMNEG00000030529	THUMPD3	92	56.838	Macaca_nemestrina
ENSHCOG00000004871	thumpd3	95	56.211	ENSMLEG00000032943	THUMPD3	93	56.025	Mandrillus_leucophaeus
ENSHCOG00000004871	thumpd3	97	78.043	ENSMAMG00000023934	thumpd3	93	77.948	Mastacembelus_armatus
ENSHCOG00000004871	thumpd3	99	77.848	ENSMZEG00005010623	thumpd3	95	77.378	Maylandia_zebra
ENSHCOG00000004871	thumpd3	81	57.644	ENSMGAG00000010182	THUMPD3	100	58.897	Meleagris_gallopavo
ENSHCOG00000004871	thumpd3	92	58.913	ENSMAUG00000012250	Thumpd3	90	57.609	Mesocricetus_auratus
ENSHCOG00000004871	thumpd3	93	54.167	ENSMICG00000010095	THUMPD3	91	53.893	Microcebus_murinus
ENSHCOG00000004871	thumpd3	92	57.768	ENSMOCG00000020148	Thumpd3	90	58.022	Microtus_ochrogaster
ENSHCOG00000004871	thumpd3	95	81.758	ENSMMOG00000021791	thumpd3	95	80.786	Mola_mola
ENSHCOG00000004871	thumpd3	92	57.974	ENSMODG00000004715	-	91	57.451	Monodelphis_domestica
ENSHCOG00000004871	thumpd3	92	79.909	ENSMALG00000017316	thumpd3	93	79.452	Monopterus_albus
ENSHCOG00000004871	thumpd3	58	54.762	MGP_CAROLIEiJ_G0028714	-	61	53.401	Mus_caroli
ENSHCOG00000004871	thumpd3	97	57.261	ENSMUSG00000030264	Thumpd3	95	56.432	Mus_musculus
ENSHCOG00000004871	thumpd3	94	57.906	MGP_PahariEiJ_G0022465	Thumpd3	92	57.051	Mus_pahari
ENSHCOG00000004871	thumpd3	97	57.261	MGP_SPRETEiJ_G0029742	Thumpd3	95	56.432	Mus_spretus
ENSHCOG00000004871	thumpd3	95	58.723	ENSMPUG00000017066	-	92	57.872	Mustela_putorius_furo
ENSHCOG00000004871	thumpd3	95	52.903	ENSMPUG00000005219	-	92	53.105	Mustela_putorius_furo
ENSHCOG00000004871	thumpd3	93	57.759	ENSMLUG00000008538	THUMPD3	91	57.112	Myotis_lucifugus
ENSHCOG00000004871	thumpd3	92	59.430	ENSNGAG00000021014	-	90	58.043	Nannospalax_galili
ENSHCOG00000004871	thumpd3	92	48.322	ENSNGAG00000001549	-	89	48.409	Nannospalax_galili
ENSHCOG00000004871	thumpd3	99	77.660	ENSNBRG00000004886	thumpd3	95	77.660	Neolamprologus_brichardi
ENSHCOG00000004871	thumpd3	95	55.789	ENSNLEG00000003863	THUMPD3	93	56.809	Nomascus_leucogenys
ENSHCOG00000004871	thumpd3	85	55.634	ENSMEUG00000009819	THUMPD3	99	57.109	Notamacropus_eugenii
ENSHCOG00000004871	thumpd3	83	55.932	ENSOPRG00000002020	THUMPD3	98	58.111	Ochotona_princeps
ENSHCOG00000004871	thumpd3	71	54.039	ENSODEG00000018242	THUMPD3	100	53.933	Octodon_degus
ENSHCOG00000004871	thumpd3	97	79.266	ENSONIG00000018977	thumpd3	95	77.167	Oreochromis_niloticus
ENSHCOG00000004871	thumpd3	83	53.699	ENSOANG00000014481	THUMPD3	97	54.567	Ornithorhynchus_anatinus
ENSHCOG00000004871	thumpd3	92	58.462	ENSOCUG00000010921	THUMPD3	90	59.070	Oryctolagus_cuniculus
ENSHCOG00000004871	thumpd3	97	77.538	ENSORLG00000000676	thumpd3	95	76.890	Oryzias_latipes
ENSHCOG00000004871	thumpd3	69	30.226	ENSORLG00020018792	thumpd2	54	33.891	Oryzias_latipes_hni
ENSHCOG00000004871	thumpd3	97	77.970	ENSORLG00020007509	thumpd3	95	77.322	Oryzias_latipes_hni
ENSHCOG00000004871	thumpd3	97	77.970	ENSORLG00015003615	thumpd3	95	77.322	Oryzias_latipes_hsok
ENSHCOG00000004871	thumpd3	97	74.459	ENSOMEG00000014115	thumpd3	94	74.138	Oryzias_melastigma
ENSHCOG00000004871	thumpd3	82	54.501	ENSOGAG00000017111	THUMPD3	99	55.718	Otolemur_garnettii
ENSHCOG00000004871	thumpd3	92	60.307	ENSOARG00000007139	THUMPD3	88	59.436	Ovis_aries
ENSHCOG00000004871	thumpd3	95	55.789	ENSPPAG00000025852	THUMPD3	92	56.809	Pan_paniscus
ENSHCOG00000004871	thumpd3	92	59.341	ENSPPRG00000008071	THUMPD3	90	58.057	Panthera_pardus
ENSHCOG00000004871	thumpd3	92	59.341	ENSPTIG00000017923	THUMPD3	90	58.278	Panthera_tigris_altaica
ENSHCOG00000004871	thumpd3	95	55.789	ENSPTRG00000014585	THUMPD3	92	56.809	Pan_troglodytes
ENSHCOG00000004871	thumpd3	95	55.814	ENSPANG00000016253	THUMPD3	92	56.237	Papio_anubis
ENSHCOG00000004871	thumpd3	93	67.841	ENSPKIG00000014009	thumpd3	92	67.841	Paramormyrops_kingsleyae
ENSHCOG00000004871	thumpd3	91	58.351	ENSPSIG00000007370	THUMPD3	90	58.952	Pelodiscus_sinensis
ENSHCOG00000004871	thumpd3	97	76.445	ENSPMGG00000017563	thumpd3	97	76.078	Periophthalmus_magnuspinnatus
ENSHCOG00000004871	thumpd3	94	58.155	ENSPEMG00000022411	Thumpd3	92	57.204	Peromyscus_maniculatus_bairdii
ENSHCOG00000004871	thumpd3	92	53.017	ENSPMAG00000001291	thumpd3	98	54.831	Petromyzon_marinus
ENSHCOG00000004871	thumpd3	94	56.263	ENSPCIG00000002049	THUMPD3	92	56.688	Phascolarctos_cinereus
ENSHCOG00000004871	thumpd3	97	77.322	ENSPFOG00000002318	thumpd3	93	77.322	Poecilia_formosa
ENSHCOG00000004871	thumpd3	97	77.322	ENSPLAG00000014804	thumpd3	93	77.322	Poecilia_latipinna
ENSHCOG00000004871	thumpd3	97	77.322	ENSPMEG00000000582	thumpd3	93	77.322	Poecilia_mexicana
ENSHCOG00000004871	thumpd3	97	77.730	ENSPREG00000009176	thumpd3	93	77.039	Poecilia_reticulata
ENSHCOG00000004871	thumpd3	90	44.419	ENSPPYG00000017616	-	89	44.419	Pongo_abelii
ENSHCOG00000004871	thumpd3	95	55.789	ENSPPYG00000029461	THUMPD3	93	56.809	Pongo_abelii
ENSHCOG00000004871	thumpd3	83	58.049	ENSPCAG00000015398	THUMPD3	97	55.904	Procavia_capensis
ENSHCOG00000004871	thumpd3	83	51.667	ENSPCOG00000023618	-	94	51.932	Propithecus_coquereli
ENSHCOG00000004871	thumpd3	94	47.872	ENSPCOG00000018095	-	92	50.538	Propithecus_coquereli
ENSHCOG00000004871	thumpd3	95	57.872	ENSPVAG00000008721	THUMPD3	92	57.537	Pteropus_vampyrus
ENSHCOG00000004871	thumpd3	99	77.848	ENSPNYG00000006918	thumpd3	95	77.378	Pundamilia_nyererei
ENSHCOG00000004871	thumpd3	99	70.042	ENSPNAG00000014936	thumpd3	98	70.105	Pygocentrus_nattereri
ENSHCOG00000004871	thumpd3	94	58.190	ENSRNOG00000006941	Thumpd3	92	57.511	Rattus_norvegicus
ENSHCOG00000004871	thumpd3	95	56.513	ENSRBIG00000035954	THUMPD3	93	56.540	Rhinopithecus_bieti
ENSHCOG00000004871	thumpd3	95	56.303	ENSRROG00000035734	THUMPD3	93	56.329	Rhinopithecus_roxellana
ENSHCOG00000004871	thumpd3	95	55.814	ENSSBOG00000023567	THUMPD3	94	57.237	Saimiri_boliviensis_boliviensis
ENSHCOG00000004871	thumpd3	92	57.609	ENSSHAG00000014467	THUMPD3	91	58.568	Sarcophilus_harrisii
ENSHCOG00000004871	thumpd3	94	70.395	ENSSFOG00015019210	thumpd3	92	70.264	Scleropages_formosus
ENSHCOG00000004871	thumpd3	99	79.114	ENSSMAG00000000609	thumpd3	97	80.346	Scophthalmus_maximus
ENSHCOG00000004871	thumpd3	99	78.782	ENSSDUG00000012179	thumpd3	97	80.519	Seriola_dumerili
ENSHCOG00000004871	thumpd3	99	78.407	ENSSLDG00000022028	thumpd3	97	78.407	Seriola_lalandi_dorsalis
ENSHCOG00000004871	thumpd3	78	61.039	ENSSARG00000002239	THUMPD3	77	61.039	Sorex_araneus
ENSHCOG00000004871	thumpd3	92	58.723	ENSSPUG00000017461	THUMPD3	92	58.723	Sphenodon_punctatus
ENSHCOG00000004871	thumpd3	99	79.704	ENSSPAG00000008345	thumpd3	94	79.493	Stegastes_partitus
ENSHCOG00000004871	thumpd3	92	59.002	ENSSSCG00000011542	THUMPD3	90	59.868	Sus_scrofa
ENSHCOG00000004871	thumpd3	90	60.626	ENSTGUG00000010440	THUMPD3	100	59.732	Taeniopygia_guttata
ENSHCOG00000004871	thumpd3	99	69.214	ENSTRUG00000004420	thumpd3	96	69.083	Takifugu_rubripes
ENSHCOG00000004871	thumpd3	97	78.834	ENSTNIG00000014627	thumpd3	99	78.618	Tetraodon_nigroviridis
ENSHCOG00000004871	thumpd3	93	52.891	ENSTBEG00000003450	THUMPD3	90	54.329	Tupaia_belangeri
ENSHCOG00000004871	thumpd3	95	58.298	ENSTTRG00000009694	THUMPD3	90	58.811	Tursiops_truncatus
ENSHCOG00000004871	thumpd3	76	30.105	ENSTTRG00000005603	THUMPD2	77	30.105	Tursiops_truncatus
ENSHCOG00000004871	thumpd3	95	57.023	ENSUAMG00000009412	THUMPD3	92	57.627	Ursus_americanus
ENSHCOG00000004871	thumpd3	95	59.780	ENSUMAG00000019241	THUMPD3	92	58.734	Ursus_maritimus
ENSHCOG00000004871	thumpd3	76	57.218	ENSVPAG00000002855	THUMPD3	91	56.168	Vicugna_pacos
ENSHCOG00000004871	thumpd3	95	58.475	ENSVVUG00000025278	THUMPD3	92	57.627	Vulpes_vulpes
ENSHCOG00000004871	thumpd3	94	58.798	ENSXETG00000001447	thumpd3	91	59.657	Xenopus_tropicalis
ENSHCOG00000004871	thumpd3	97	77.468	ENSXCOG00000000159	thumpd3	97	77.204	Xiphophorus_couchianus
ENSHCOG00000004871	thumpd3	97	77.253	ENSXMAG00000001423	thumpd3	93	76.989	Xiphophorus_maculatus