EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000005036 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5543 bases
Position: chrKV880048.1:541862-547404
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003660	R3H	PF01424.22	9.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008364	-	1392	-	ENSHCOP00000003660	463 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000005036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005036	-	56	82.500	ENSG00000048991	R3HDM1	80	38.667	Homo_sapiens
ENSHCOG00000005036	-	74	45.324	ENSAMXG00000020587	arpp21	60	45.897	Astyanax_mexicanus
ENSHCOG00000005036	-	55	78.947	ENSCAFG00020016119	R3HDM1	50	67.273	Canis_lupus_dingo
ENSHCOG00000005036	-	60	76.190	ENSCPOG00000012784	R3HDM1	64	66.667	Cavia_porcellus
ENSHCOG00000005036	-	56	78.571	ENSCLAG00000007962	R3HDM1	57	68.421	Chinchilla_lanigera
ENSHCOG00000005036	-	71	38.028	ENSCGRG00000012080	R3hdm1	56	58.896	Cricetulus_griseus_crigri
ENSHCOG00000005036	-	79	41.950	ENSDARG00000061081	arpp21	62	45.263	Danio_rerio
ENSHCOG00000005036	-	55	78.947	ENSFDAG00000016478	R3HDM1	57	66.667	Fukomys_damarensis
ENSHCOG00000005036	-	55	81.579	ENSHGLG00000015718	R3HDM1	57	68.421	Heterocephalus_glaber_female
ENSHCOG00000005036	-	55	81.579	ENSHGLG00100003184	-	57	68.421	Heterocephalus_glaber_male
ENSHCOG00000005036	-	71	41.602	ENSIPUG00000020552	arpp21	51	43.855	Ictalurus_punctatus
ENSHCOG00000005036	-	56	80.000	ENSSTOG00000007572	R3HDM1	56	69.091	Ictidomys_tridecemlineatus
ENSHCOG00000005036	-	63	40.682	ENSMAUG00000010315	R3hdm1	56	58.896	Mesocricetus_auratus
ENSHCOG00000005036	-	63	40.157	ENSMOCG00000019833	-	56	58.896	Microtus_ochrogaster
ENSHCOG00000005036	-	56	82.500	MGP_CAROLIEiJ_G0014543	R3hdm1	60	57.241	Mus_caroli
ENSHCOG00000005036	-	56	82.500	ENSMUSG00000056211	R3hdm1	60	57.241	Mus_musculus
ENSHCOG00000005036	-	63	42.257	MGP_PahariEiJ_G0027779	R3hdm1	60	57.241	Mus_pahari
ENSHCOG00000005036	-	56	82.500	MGP_SPRETEiJ_G0015350	R3hdm1	60	57.241	Mus_spretus
ENSHCOG00000005036	-	56	76.190	ENSODEG00000008607	R3HDM1	57	66.667	Octodon_degus
ENSHCOG00000005036	-	58	56.604	ENSPKIG00000011224	R3HDM1	52	63.415	Paramormyrops_kingsleyae
ENSHCOG00000005036	-	62	47.887	ENSPMGG00000011264	-	58	55.172	Periophthalmus_magnuspinnatus
ENSHCOG00000005036	-	63	42.520	ENSPEMG00000015187	R3hdm1	56	69.091	Peromyscus_maniculatus_bairdii
ENSHCOG00000005036	-	53	74.286	ENSPREG00000007902	r3hdm1	53	74.286	Poecilia_reticulata
ENSHCOG00000005036	-	81	44.496	ENSPNAG00000004162	arpp21	58	45.244	Pygocentrus_nattereri