EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000005050 (Gene tree)
Gene ID: 109524300
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5145 bases
Position: chrKV880218.1:4508998-4514142
Accession: 109524300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000003673	MTS	PF05175.14	7.7e-05	1	1
ENSHCOP00000003650	MTS	PF05175.14	9.2e-05	1	1
ENSHCOP00000003662	MTS	PF05175.14	9.7e-05	1	1
ENSHCOP00000003650	Met_10	PF02475.16	8.1e-30	1	1
ENSHCOP00000003673	Met_10	PF02475.16	8.2e-30	1	1
ENSHCOP00000003662	Met_10	PF02475.16	8.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008346	-	1183	-	ENSHCOP00000003673	344 (aa)	-	-
ENSHCOT00000008366	-	1179	XM_019884074	ENSHCOP00000003662	392 (aa)	XP_019739633	-
ENSHCOT00000008379	-	1143	-	ENSHCOP00000003650	380 (aa)	-	-

Gene Model

Click here to download ENSHCOG00000005050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005050	trmt12	94	52.149	ENSG00000183665	TRMT12	92	48.668	Homo_sapiens
ENSHCOG00000005050	trmt12	96	76.667	ENSAPOG00000011979	trmt12	100	71.216	Acanthochromis_polyacanthus
ENSHCOG00000005050	trmt12	94	52.722	ENSAMEG00000019612	TRMT12	92	49.034	Ailuropoda_melanoleuca
ENSHCOG00000005050	trmt12	94	74.006	ENSACIG00000012982	trmt12	99	68.734	Amphilophus_citrinellus
ENSHCOG00000005050	trmt12	96	75.152	ENSAOCG00000020570	trmt12	100	69.925	Amphiprion_ocellaris
ENSHCOG00000005050	trmt12	96	75.758	ENSAPEG00000006335	trmt12	100	70.426	Amphiprion_percula
ENSHCOG00000005050	trmt12	96	75.602	ENSATEG00000018316	trmt12	100	68.642	Anabas_testudineus
ENSHCOG00000005050	trmt12	95	75.915	ENSACLG00000001008	trmt12	100	69.975	Astatotilapia_calliptera
ENSHCOG00000005050	trmt12	99	57.183	ENSAMXG00000040366	trmt12	99	52.857	Astyanax_mexicanus
ENSHCOG00000005050	trmt12	94	53.161	ENSBTAG00000020398	TRMT12	89	49.515	Bos_taurus
ENSHCOG00000005050	trmt12	68	38.723	WBGene00009586	F40F9.10	50	39.149	Caenorhabditis_elegans
ENSHCOG00000005050	trmt12	94	50.857	ENSCJAG00000022174	TRMT12	92	47.343	Callithrix_jacchus
ENSHCOG00000005050	trmt12	94	51.576	ENSCAFG00000001040	TRMT12	94	48.668	Canis_familiaris
ENSHCOG00000005050	trmt12	94	51.576	ENSCAFG00020006500	TRMT12	94	48.668	Canis_lupus_dingo
ENSHCOG00000005050	trmt12	94	52.299	ENSCHIG00000016574	TRMT12	94	48.786	Capra_hircus
ENSHCOG00000005050	trmt12	98	51.111	ENSCPOG00000026520	TRMT12	93	48.662	Cavia_porcellus
ENSHCOG00000005050	trmt12	94	52.722	ENSCSAG00000018615	TRMT12	92	48.910	Chlorocebus_sabaeus
ENSHCOG00000005050	trmt12	96	53.699	ENSCPBG00000014290	TRMT12	93	50.353	Chrysemys_picta_bellii
ENSHCOG00000005050	trmt12	83	46.048	ENSCING00000019633	-	97	46.048	Ciona_intestinalis
ENSHCOG00000005050	trmt12	87	46.179	ENSCSAVG00000000415	-	95	45.847	Ciona_savignyi
ENSHCOG00000005050	trmt12	87	56.393	ENSCGRG00001014834	Trmt12	82	52.722	Cricetulus_griseus_chok1gshd
ENSHCOG00000005050	trmt12	96	67.463	ENSCSEG00000002675	trmt12	95	62.255	Cynoglossus_semilaevis
ENSHCOG00000005050	trmt12	100	66.667	ENSCVAG00000005590	trmt12	100	66.667	Cyprinodon_variegatus
ENSHCOG00000005050	trmt12	99	53.659	ENSDARG00000060338	trmt12	99	53.659	Danio_rerio
ENSHCOG00000005050	trmt12	94	51.003	ENSETEG00000009373	TRMT12	92	47.215	Echinops_telfairi
ENSHCOG00000005050	trmt12	94	53.295	ENSEASG00005022441	TRMT12	94	49.879	Equus_asinus_asinus
ENSHCOG00000005050	trmt12	94	49.568	ENSEEUG00000004844	TRMT12	93	46.117	Erinaceus_europaeus
ENSHCOG00000005050	trmt12	96	64.793	ENSELUG00000004240	trmt12	99	61.538	Esox_lucius
ENSHCOG00000005050	trmt12	76	57.597	ENSFALG00000003825	TRMT12	93	65.025	Ficedula_albicollis
ENSHCOG00000005050	trmt12	94	51.576	ENSFDAG00000016647	TRMT12	94	48.184	Fukomys_damarensis
ENSHCOG00000005050	trmt12	98	62.018	ENSFHEG00000017338	trmt12	96	59.358	Fundulus_heteroclitus
ENSHCOG00000005050	trmt12	98	55.000	ENSGALG00000006773	TRMT12	78	55.000	Gallus_gallus
ENSHCOG00000005050	trmt12	100	65.835	ENSGAFG00000020056	trmt12	100	65.835	Gambusia_affinis
ENSHCOG00000005050	trmt12	92	74.843	ENSGACG00000017351	trmt12	99	67.624	Gasterosteus_aculeatus
ENSHCOG00000005050	trmt12	96	55.249	ENSGAGG00000006032	TRMT12	95	51.422	Gopherus_agassizii
ENSHCOG00000005050	trmt12	95	75.305	ENSHBUG00000016412	trmt12	100	69.727	Haplochromis_burtoni
ENSHCOG00000005050	trmt12	94	51.289	ENSHGLG00000020498	TRMT12	94	48.910	Heterocephalus_glaber_female
ENSHCOG00000005050	trmt12	94	51.289	ENSHGLG00100020132	TRMT12	94	48.668	Heterocephalus_glaber_male
ENSHCOG00000005050	trmt12	96	58.284	ENSIPUG00000018011	trmt12	92	53.431	Ictalurus_punctatus
ENSHCOG00000005050	trmt12	95	50.997	ENSSTOG00000030617	TRMT12	94	48.792	Ictidomys_tridecemlineatus
ENSHCOG00000005050	trmt12	99	68.090	ENSKMAG00000000891	trmt12	99	68.090	Kryptolebias_marmoratus
ENSHCOG00000005050	trmt12	63	77.982	ENSLBEG00000017456	-	89	77.982	Labrus_bergylta
ENSHCOG00000005050	trmt12	98	71.765	ENSLBEG00000028712	trmt12	100	69.444	Labrus_bergylta
ENSHCOG00000005050	trmt12	94	54.674	ENSLACG00000015869	TRMT12	94	49.881	Latimeria_chalumnae
ENSHCOG00000005050	trmt12	94	59.091	ENSLOCG00000015290	trmt12	99	52.826	Lepisosteus_oculatus
ENSHCOG00000005050	trmt12	96	48.910	ENSLAFG00000012519	TRMT12	94	48.910	Loxodonta_africana
ENSHCOG00000005050	trmt12	94	52.149	ENSMMUG00000015490	TRMT12	93	48.426	Macaca_mulatta
ENSHCOG00000005050	trmt12	99	68.657	ENSMAMG00000020311	trmt12	99	68.657	Mastacembelus_armatus
ENSHCOG00000005050	trmt12	95	74.695	ENSMZEG00005007349	trmt12	100	68.983	Maylandia_zebra
ENSHCOG00000005050	trmt12	99	51.422	ENSMGAG00000004174	TRMT12	95	51.435	Meleagris_gallopavo
ENSHCOG00000005050	trmt12	99	66.418	ENSMMOG00000000412	trmt12	99	66.418	Mola_mola
ENSHCOG00000005050	trmt12	97	52.326	ENSMODG00000021403	-	92	47.750	Monodelphis_domestica
ENSHCOG00000005050	trmt12	94	51.622	ENSMODG00000011798	-	85	46.437	Monodelphis_domestica
ENSHCOG00000005050	trmt12	96	75.602	ENSMALG00000008668	trmt12	100	69.212	Monopterus_albus
ENSHCOG00000005050	trmt12	95	52.286	MGP_CAROLIEiJ_G0019820	Trmt12	93	49.029	Mus_caroli
ENSHCOG00000005050	trmt12	95	53.429	ENSMUSG00000037085	Trmt12	92	50.000	Mus_musculus
ENSHCOG00000005050	trmt12	95	53.714	MGP_PahariEiJ_G0019829	Trmt12	93	50.243	Mus_pahari
ENSHCOG00000005050	trmt12	95	52.857	MGP_SPRETEiJ_G0020717	Trmt12	92	49.515	Mus_spretus
ENSHCOG00000005050	trmt12	96	50.121	ENSMPUG00000019150	TRMT12	93	50.121	Mustela_putorius_furo
ENSHCOG00000005050	trmt12	96	47.837	ENSMLUG00000003753	TRMT12	94	47.837	Myotis_lucifugus
ENSHCOG00000005050	trmt12	94	50.143	ENSNGAG00000014548	Trmt12	95	46.860	Nannospalax_galili
ENSHCOG00000005050	trmt12	100	69.750	ENSNBRG00000021510	trmt12	100	69.750	Neolamprologus_brichardi
ENSHCOG00000005050	trmt12	94	49.713	ENSOPRG00000008067	TRMT12	79	61.905	Ochotona_princeps
ENSHCOG00000005050	trmt12	94	51.862	ENSODEG00000018933	TRMT12	94	48.426	Octodon_degus
ENSHCOG00000005050	trmt12	95	76.829	ENSONIG00000002614	trmt12	100	70.792	Oreochromis_niloticus
ENSHCOG00000005050	trmt12	99	47.514	ENSOANG00000009987	TRMT12	97	43.961	Ornithorhynchus_anatinus
ENSHCOG00000005050	trmt12	96	44.337	ENSOCUG00000026379	TRMT12	69	55.305	Oryctolagus_cuniculus
ENSHCOG00000005050	trmt12	94	73.457	ENSORLG00000001280	trmt12	100	67.085	Oryzias_latipes
ENSHCOG00000005050	trmt12	94	73.765	ENSORLG00020000708	trmt12	100	67.419	Oryzias_latipes_hni
ENSHCOG00000005050	trmt12	94	73.148	ENSORLG00015012344	trmt12	100	66.834	Oryzias_latipes_hsok
ENSHCOG00000005050	trmt12	100	65.414	ENSOMEG00000015267	trmt12	98	65.414	Oryzias_melastigma
ENSHCOG00000005050	trmt12	94	51.714	ENSOGAG00000015845	TRMT12	94	48.675	Otolemur_garnettii
ENSHCOG00000005050	trmt12	94	63.804	ENSPKIG00000004640	trmt12	99	57.841	Paramormyrops_kingsleyae
ENSHCOG00000005050	trmt12	68	58.736	ENSPSIG00000003476	TRMT12	99	58.736	Pelodiscus_sinensis
ENSHCOG00000005050	trmt12	99	61.347	ENSPMGG00000016356	trmt12	97	61.347	Periophthalmus_magnuspinnatus
ENSHCOG00000005050	trmt12	94	53.982	ENSPCIG00000002967	TRMT12	85	48.750	Phascolarctos_cinereus
ENSHCOG00000005050	trmt12	94	70.988	ENSPFOG00000016931	trmt12	94	65.796	Poecilia_formosa
ENSHCOG00000005050	trmt12	99	65.750	ENSPLAG00000020621	trmt12	99	65.750	Poecilia_latipinna
ENSHCOG00000005050	trmt12	94	71.914	ENSPMEG00000000818	trmt12	99	66.500	Poecilia_mexicana
ENSHCOG00000005050	trmt12	97	70.783	ENSPREG00000011621	trmt12	99	67.250	Poecilia_reticulata
ENSHCOG00000005050	trmt12	94	52.149	ENSPPYG00000018866	TRMT12	92	48.426	Pongo_abelii
ENSHCOG00000005050	trmt12	96	48.792	ENSPCAG00000000556	TRMT12	93	48.792	Procavia_capensis
ENSHCOG00000005050	trmt12	94	52.571	ENSPVAG00000009149	TRMT12	93	49.034	Pteropus_vampyrus
ENSHCOG00000005050	trmt12	95	74.085	ENSPNYG00000010696	trmt12	99	69.010	Pundamilia_nyererei
ENSHCOG00000005050	trmt12	98	56.410	ENSPNAG00000019028	trmt12	99	52.267	Pygocentrus_nattereri
ENSHCOG00000005050	trmt12	95	53.143	ENSRNOG00000008978	Trmt12	94	49.757	Rattus_norvegicus
ENSHCOG00000005050	trmt12	94	53.274	ENSSHAG00000003345	TRMT12	92	47.500	Sarcophilus_harrisii
ENSHCOG00000005050	trmt12	95	62.130	ENSSFOG00015006090	trmt12	99	54.545	Scleropages_formosus
ENSHCOG00000005050	trmt12	94	75.767	ENSSMAG00000013247	trmt12	99	70.000	Scophthalmus_maximus
ENSHCOG00000005050	trmt12	96	76.506	ENSSDUG00000006168	trmt12	100	70.617	Seriola_dumerili
ENSHCOG00000005050	trmt12	96	77.410	ENSSLDG00000025007	trmt12	100	70.617	Seriola_lalandi_dorsalis
ENSHCOG00000005050	trmt12	97	52.589	ENSSPUG00000005321	TRMT12	93	49.763	Sphenodon_punctatus
ENSHCOG00000005050	trmt12	96	74.545	ENSSPAG00000009435	trmt12	97	68.486	Stegastes_partitus
ENSHCOG00000005050	trmt12	99	50.245	ENSTGUG00000002280	TRMT12	99	51.106	Taeniopygia_guttata
ENSHCOG00000005050	trmt12	96	70.606	ENSTRUG00000011548	trmt12	99	65.404	Takifugu_rubripes
ENSHCOG00000005050	trmt12	95	67.781	ENSTNIG00000016866	trmt12	99	61.386	Tetraodon_nigroviridis
ENSHCOG00000005050	trmt12	94	52.571	ENSUAMG00000002067	TRMT12	95	49.517	Ursus_americanus
ENSHCOG00000005050	trmt12	94	52.149	ENSVPAG00000006519	TRMT12	93	49.153	Vicugna_pacos
ENSHCOG00000005050	trmt12	94	51.289	ENSVVUG00000016790	TRMT12	93	48.551	Vulpes_vulpes
ENSHCOG00000005050	trmt12	96	55.891	ENSXETG00000009641	trmt12	95	50.746	Xenopus_tropicalis
ENSHCOG00000005050	trmt12	94	70.859	ENSXCOG00000016505	trmt12	100	64.851	Xiphophorus_couchianus
ENSHCOG00000005050	trmt12	100	65.174	ENSXMAG00000025318	trmt12	100	65.174	Xiphophorus_maculatus