EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005206 (Gene tree)
Gene ID: 109524294
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 5613 bases
Position: chrKV880218.1:4348598-4354210
Accession: 109524294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019684	MMR_HSR1	PF01926.23	9.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008122	-	1218	XM_019884063	ENSHCOP00000019684	405 (aa)	XP_019739622	-

Gene Model

Click here to download ENSHCOG00000005206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005206's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005206	arl13a	67	39.860	ENSHCOG00000006106	arl13b	74	41.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005206	arl13a	100	70.048	ENSACIG00000012235	arl13a	100	70.048	Amphilophus_citrinellus
ENSHCOG00000005206	arl13a	100	66.826	ENSAOCG00000024309	arl13a	96	69.121	Amphiprion_ocellaris
ENSHCOG00000005206	arl13a	100	68.421	ENSAPEG00000006626	arl13a	94	71.667	Amphiprion_percula
ENSHCOG00000005206	arl13a	100	70.238	ENSATEG00000018113	arl13a	94	71.090	Anabas_testudineus
ENSHCOG00000005206	arl13a	100	66.746	ENSACLG00000000738	arl13a	100	67.225	Astatotilapia_calliptera
ENSHCOG00000005206	arl13a	99	56.901	ENSAMXG00000021495	arl13a	98	56.867	Astyanax_mexicanus
ENSHCOG00000005206	arl13a	54	48.889	ENSCPBG00000014304	ARL13A	84	48.889	Chrysemys_picta_bellii
ENSHCOG00000005206	arl13a	99	57.279	ENSCSEG00000002533	arl13a	99	59.005	Cynoglossus_semilaevis
ENSHCOG00000005206	arl13a	99	70.433	ENSCVAG00000005783	arl13a	99	65.060	Cyprinodon_variegatus
ENSHCOG00000005206	arl13a	99	60.482	ENSDARG00000052575	arl13a	93	61.687	Danio_rerio
ENSHCOG00000005206	arl13a	100	69.856	ENSFHEG00000017023	arl13a	94	69.856	Fundulus_heteroclitus
ENSHCOG00000005206	arl13a	100	68.660	ENSGAFG00000019994	arl13a	99	64.029	Gambusia_affinis
ENSHCOG00000005206	arl13a	100	66.187	ENSGACG00000017318	arl13a	99	66.427	Gasterosteus_aculeatus
ENSHCOG00000005206	arl13a	100	70.574	ENSHBUG00000016100	arl13a	94	71.053	Haplochromis_burtoni
ENSHCOG00000005206	arl13a	99	55.875	ENSIPUG00000017720	arl13a	99	56.595	Ictalurus_punctatus
ENSHCOG00000005206	arl13a	100	66.508	ENSKMAG00000001139	arl13a	94	66.746	Kryptolebias_marmoratus
ENSHCOG00000005206	arl13a	100	69.690	ENSLBEG00000028724	arl13a	94	70.264	Labrus_bergylta
ENSHCOG00000005206	arl13a	99	49.640	ENSLOCG00000015307	arl13a	94	51.429	Lepisosteus_oculatus
ENSHCOG00000005206	arl13a	100	68.483	ENSMAMG00000020385	arl13a	100	68.957	Mastacembelus_armatus
ENSHCOG00000005206	arl13a	100	70.574	ENSMZEG00005007052	arl13a	100	71.053	Maylandia_zebra
ENSHCOG00000005206	arl13a	99	64.806	ENSMMOG00000000880	arl13a	100	65.610	Mola_mola
ENSHCOG00000005206	arl13a	55	78.603	ENSMALG00000009029	arl13a	100	60.476	Monopterus_albus
ENSHCOG00000005206	arl13a	100	66.746	ENSNBRG00000021766	arl13a	100	66.905	Neolamprologus_brichardi
ENSHCOG00000005206	arl13a	99	70.504	ENSONIG00000002645	arl13a	100	70.883	Oreochromis_niloticus
ENSHCOG00000005206	arl13a	100	70.024	ENSORLG00000001425	arl13a	94	70.071	Oryzias_latipes
ENSHCOG00000005206	arl13a	100	69.544	ENSORLG00020021844	arl13a	94	69.359	Oryzias_latipes_hni
ENSHCOG00000005206	arl13a	100	69.784	ENSORLG00015011862	arl13a	100	69.834	Oryzias_latipes_hsok
ENSHCOG00000005206	arl13a	100	68.825	ENSOMEG00000015603	arl13a	94	69.359	Oryzias_melastigma
ENSHCOG00000005206	arl13a	100	55.344	ENSPKIG00000013558	arl13a	97	55.792	Paramormyrops_kingsleyae
ENSHCOG00000005206	arl13a	54	50.893	ENSPSIG00000003515	ARL13A	100	50.893	Pelodiscus_sinensis
ENSHCOG00000005206	arl13a	100	57.692	ENSPMGG00000017973	arl13a	99	58.134	Periophthalmus_magnuspinnatus
ENSHCOG00000005206	arl13a	100	68.750	ENSPFOG00000016707	arl13a	94	69.305	Poecilia_formosa
ENSHCOG00000005206	arl13a	100	63.614	ENSPLAG00000011307	arl13a	99	64.423	Poecilia_latipinna
ENSHCOG00000005206	arl13a	100	68.825	ENSPMEG00000017855	arl13a	94	69.617	Poecilia_mexicana
ENSHCOG00000005206	arl13a	99	68.434	ENSPREG00000011435	arl13a	93	68.990	Poecilia_reticulata
ENSHCOG00000005206	arl13a	100	66.507	ENSPNYG00000011485	arl13a	100	66.986	Pundamilia_nyererei
ENSHCOG00000005206	arl13a	99	57.767	ENSSFOG00015010065	arl13a	99	58.738	Scleropages_formosus
ENSHCOG00000005206	arl13a	100	67.303	ENSSMAG00000013557	arl13a	100	68.019	Scophthalmus_maximus
ENSHCOG00000005206	arl13a	100	64.578	ENSSDUG00000000933	arl13a	100	66.507	Seriola_dumerili
ENSHCOG00000005206	arl13a	100	70.952	ENSSLDG00000009973	arl13a	95	72.143	Seriola_lalandi_dorsalis
ENSHCOG00000005206	arl13a	76	87.850	ENSSPAG00000009109	arl13a	87	86.344	Stegastes_partitus
ENSHCOG00000005206	arl13a	99	63.373	ENSXCOG00000016270	arl13a	99	63.942	Xiphophorus_couchianus
ENSHCOG00000005206	arl13a	100	68.585	ENSXMAG00000013485	arl13a	99	64.678	Xiphophorus_maculatus