EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000005278 (Gene tree)
Gene ID: 109526185
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 19329 bases
Position: chrKV879773.1:1631420-1650748
Accession: 109526185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019729	PAM2	PF07145.15	6.7e-06	1	1
ENSHCOP00000019731	PAM2	PF07145.15	6.7e-06	1	1
ENSHCOP00000019736	PAM2	PF07145.15	6.7e-06	1	1
ENSHCOP00000019729	LsmAD	PF06741.13	3.4e-14	1	1
ENSHCOP00000019731	LsmAD	PF06741.13	3.4e-14	1	1
ENSHCOP00000019736	LsmAD	PF06741.13	3.4e-14	1	1
ENSHCOP00000019729	SM-ATX	PF14438.6	3.7e-21	1	1
ENSHCOP00000019736	SM-ATX	PF14438.6	3.8e-21	1	1
ENSHCOP00000019731	SM-ATX	PF14438.6	4.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000008013	-	4609	XM_019887324	ENSHCOP00000019729	1073 (aa)	XP_019742883	-
ENSHCOT00000007985	-	4627	XM_019887299	ENSHCOP00000019736	1079 (aa)	XP_019742858	-
ENSHCOT00000007998	-	4612	XM_019887315	ENSHCOP00000019731	1074 (aa)	XP_019742874	-

Gene Model

Click here to download ENSHCOG00000005278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005278	atxn2	93	67.541	ENSG00000204842	ATXN2	96	66.349	Homo_sapiens
ENSHCOG00000005278	atxn2	98	83.626	ENSAPOG00000014663	atxn2	99	85.118	Acanthochromis_polyacanthus
ENSHCOG00000005278	atxn2	93	67.937	ENSAMEG00000013747	ATXN2	96	66.071	Ailuropoda_melanoleuca
ENSHCOG00000005278	atxn2	95	84.791	ENSAOCG00000001107	atxn2	99	84.834	Amphiprion_ocellaris
ENSHCOG00000005278	atxn2	97	83.754	ENSAPEG00000020250	atxn2	99	84.739	Amphiprion_percula
ENSHCOG00000005278	atxn2	93	69.304	ENSAPLG00000008724	ATXN2	96	67.359	Anas_platyrhynchos
ENSHCOG00000005278	atxn2	93	67.089	ENSACAG00000002419	ATXN2	96	65.579	Anolis_carolinensis
ENSHCOG00000005278	atxn2	94	67.398	ENSANAG00000022522	ATXN2	96	66.032	Aotus_nancymaae
ENSHCOG00000005278	atxn2	96	71.347	ENSAMXG00000002342	atxn2	99	70.162	Astyanax_mexicanus
ENSHCOG00000005278	atxn2	92	69.048	ENSBTAG00000022069	ATXN2	96	66.984	Bos_taurus
ENSHCOG00000005278	atxn2	94	67.284	ENSCJAG00000011756	ATXN2	95	60.635	Callithrix_jacchus
ENSHCOG00000005278	atxn2	93	68.197	ENSCAFG00000008606	ATXN2	79	65.982	Canis_familiaris
ENSHCOG00000005278	atxn2	92	69.048	ENSCAFG00020017041	ATXN2	96	66.984	Canis_lupus_dingo
ENSHCOG00000005278	atxn2	94	66.871	ENSCHIG00000012141	ATXN2	83	58.779	Capra_hircus
ENSHCOG00000005278	atxn2	93	67.937	ENSTSYG00000002717	ATXN2	96	66.667	Carlito_syrichta
ENSHCOG00000005278	atxn2	62	52.493	ENSCAPG00000013332	ATXN2	98	50.954	Cavia_aperea
ENSHCOG00000005278	atxn2	94	67.601	ENSCPOG00000001390	ATXN2	79	65.789	Cavia_porcellus
ENSHCOG00000005278	atxn2	94	67.391	ENSCCAG00000026267	ATXN2	96	66.032	Cebus_capucinus
ENSHCOG00000005278	atxn2	93	67.213	ENSCATG00000017877	ATXN2	95	60.635	Cercocebus_atys
ENSHCOG00000005278	atxn2	93	68.038	ENSCLAG00000009324	ATXN2	94	66.172	Chinchilla_lanigera
ENSHCOG00000005278	atxn2	93	67.541	ENSCSAG00000002590	ATXN2	89	65.789	Chlorocebus_sabaeus
ENSHCOG00000005278	atxn2	72	60.181	ENSCHOG00000004284	ATXN2	77	60.181	Choloepus_hoffmanni
ENSHCOG00000005278	atxn2	92	56.851	ENSCPBG00000003465	ATXN2	99	57.046	Chrysemys_picta_bellii
ENSHCOG00000005278	atxn2	93	67.619	ENSCANG00000042302	ATXN2	96	66.349	Colobus_angolensis_palliatus
ENSHCOG00000005278	atxn2	92	60.265	ENSCGRG00001022603	Atxn2	80	58.944	Cricetulus_griseus_chok1gshd
ENSHCOG00000005278	atxn2	94	68.025	ENSCGRG00000015823	Atxn2	94	66.176	Cricetulus_griseus_crigri
ENSHCOG00000005278	atxn2	96	78.612	ENSCSEG00000009072	-	99	78.265	Cynoglossus_semilaevis
ENSHCOG00000005278	atxn2	96	79.621	ENSCSEG00000018366	atxn2	99	79.810	Cynoglossus_semilaevis
ENSHCOG00000005278	atxn2	91	83.746	ENSCVAG00000020160	atxn2	99	79.810	Cyprinodon_variegatus
ENSHCOG00000005278	atxn2	93	66.667	ENSDNOG00000015696	ATXN2	95	68.421	Dasypus_novemcinctus
ENSHCOG00000005278	atxn2	93	58.730	ENSDORG00000000808	Atxn2	96	56.522	Dipodomys_ordii
ENSHCOG00000005278	atxn2	87	58.861	ENSETEG00000005224	ATXN2	71	58.861	Echinops_telfairi
ENSHCOG00000005278	atxn2	94	68.339	ENSEASG00005012077	ATXN2	96	66.984	Equus_asinus_asinus
ENSHCOG00000005278	atxn2	95	68.224	ENSECAG00000014347	ATXN2	78	66.374	Equus_caballus
ENSHCOG00000005278	atxn2	72	66.349	ENSEEUG00000014635	-	71	66.349	Erinaceus_europaeus
ENSHCOG00000005278	atxn2	96	77.011	ENSELUG00000019632	atxn2	94	77.011	Esox_lucius
ENSHCOG00000005278	atxn2	93	68.197	ENSFCAG00000003178	ATXN2	95	61.587	Felis_catus
ENSHCOG00000005278	atxn2	92	64.214	ENSFALG00000009001	ATXN2	95	63.492	Ficedula_albicollis
ENSHCOG00000005278	atxn2	93	68.571	ENSFDAG00000020942	ATXN2	96	66.667	Fukomys_damarensis
ENSHCOG00000005278	atxn2	88	80.186	ENSFHEG00000019561	atxn2	98	80.480	Fundulus_heteroclitus
ENSHCOG00000005278	atxn2	85	86.242	ENSGMOG00000007412	atxn2	85	86.288	Gadus_morhua
ENSHCOG00000005278	atxn2	92	66.107	ENSGALG00000004625	ATXN2	95	64.537	Gallus_gallus
ENSHCOG00000005278	atxn2	92	86.577	ENSGAFG00000003302	atxn2	99	82.303	Gambusia_affinis
ENSHCOG00000005278	atxn2	92	88.926	ENSGACG00000006295	atxn2	92	88.926	Gasterosteus_aculeatus
ENSHCOG00000005278	atxn2	92	57.765	ENSGAGG00000005014	ATXN2	99	57.962	Gopherus_agassizii
ENSHCOG00000005278	atxn2	95	65.951	ENSGGOG00000002137	ATXN2	96	66.349	Gorilla_gorilla
ENSHCOG00000005278	atxn2	95	82.481	ENSHBUG00000002921	atxn2	99	82.436	Haplochromis_burtoni
ENSHCOG00000005278	atxn2	93	68.571	ENSHGLG00100019351	ATXN2	96	66.667	Heterocephalus_glaber_male
ENSHCOG00000005278	atxn2	94	66.634	ENSIPUG00000016649	atxn2	99	65.728	Ictalurus_punctatus
ENSHCOG00000005278	atxn2	93	67.937	ENSSTOG00000000978	ATXN2	99	53.099	Ictidomys_tridecemlineatus
ENSHCOG00000005278	atxn2	96	81.043	ENSKMAG00000000980	atxn2	99	82.034	Kryptolebias_marmoratus
ENSHCOG00000005278	atxn2	57	77.687	ENSLBEG00000017484	atxn2	98	76.077	Labrus_bergylta
ENSHCOG00000005278	atxn2	93	71.519	ENSLACG00000012531	ATXN2	96	69.436	Latimeria_chalumnae
ENSHCOG00000005278	atxn2	93	77.987	ENSLOCG00000007880	atxn2	99	68.655	Lepisosteus_oculatus
ENSHCOG00000005278	atxn2	93	67.722	ENSLAFG00000007416	ATXN2	96	65.782	Loxodonta_africana
ENSHCOG00000005278	atxn2	93	67.213	ENSMFAG00000000374	ATXN2	96	66.032	Macaca_fascicularis
ENSHCOG00000005278	atxn2	92	68.707	ENSMMUG00000002226	ATXN2	96	66.667	Macaca_mulatta
ENSHCOG00000005278	atxn2	93	67.213	ENSMNEG00000035588	ATXN2	96	66.032	Macaca_nemestrina
ENSHCOG00000005278	atxn2	93	67.302	ENSMLEG00000024324	ATXN2	96	66.032	Mandrillus_leucophaeus
ENSHCOG00000005278	atxn2	97	82.193	ENSMAMG00000019160	atxn2	99	81.614	Mastacembelus_armatus
ENSHCOG00000005278	atxn2	95	82.386	ENSMZEG00005008476	atxn2	99	82.342	Maylandia_zebra
ENSHCOG00000005278	atxn2	93	68.987	ENSMGAG00000005288	ATXN2	96	67.062	Meleagris_gallopavo
ENSHCOG00000005278	atxn2	62	53.372	ENSMAUG00000008223	-	98	53.079	Mesocricetus_auratus
ENSHCOG00000005278	atxn2	92	69.048	ENSMICG00000013541	ATXN2	96	66.984	Microcebus_murinus
ENSHCOG00000005278	atxn2	62	52.276	ENSMOCG00000005219	Atxn2	98	51.836	Microtus_ochrogaster
ENSHCOG00000005278	atxn2	96	82.319	ENSMMOG00000013189	atxn2	96	77.419	Mola_mola
ENSHCOG00000005278	atxn2	95	65.663	ENSMODG00000012221	ATXN2	79	68.770	Monodelphis_domestica
ENSHCOG00000005278	atxn2	96	82.308	ENSMALG00000018529	atxn2	99	82.308	Monopterus_albus
ENSHCOG00000005278	atxn2	92	66.667	MGP_CAROLIEiJ_G0027692	Atxn2	91	64.620	Mus_caroli
ENSHCOG00000005278	atxn2	92	66.997	ENSMUSG00000042605	Atxn2	97	53.271	Mus_musculus
ENSHCOG00000005278	atxn2	84	66.667	MGP_PahariEiJ_G0024272	Atxn2	98	50.514	Mus_pahari
ENSHCOG00000005278	atxn2	92	66.997	MGP_SPRETEiJ_G0028690	Atxn2	91	63.900	Mus_spretus
ENSHCOG00000005278	atxn2	93	61.905	ENSMPUG00000002212	ATXN2	96	60.417	Mustela_putorius_furo
ENSHCOG00000005278	atxn2	94	68.553	ENSMLUG00000015559	ATXN2	99	53.521	Myotis_lucifugus
ENSHCOG00000005278	atxn2	91	87.197	ENSNBRG00000015794	atxn2	92	87.197	Neolamprologus_brichardi
ENSHCOG00000005278	atxn2	95	65.749	ENSNLEG00000000484	ATXN2	96	66.349	Nomascus_leucogenys
ENSHCOG00000005278	atxn2	79	75.000	ENSMEUG00000012244	-	81	75.000	Notamacropus_eugenii
ENSHCOG00000005278	atxn2	92	59.736	ENSOPRG00000014599	ATXN2	96	58.333	Ochotona_princeps
ENSHCOG00000005278	atxn2	92	68.707	ENSODEG00000010798	ATXN2	96	66.667	Octodon_degus
ENSHCOG00000005278	atxn2	93	87.975	ENSONIG00000014521	atxn2	91	87.975	Oreochromis_niloticus
ENSHCOG00000005278	atxn2	79	75.796	ENSOANG00000004796	ATXN2	95	71.348	Ornithorhynchus_anatinus
ENSHCOG00000005278	atxn2	93	67.089	ENSOCUG00000002855	ATXN2	67	65.282	Oryctolagus_cuniculus
ENSHCOG00000005278	atxn2	91	80.402	ENSORLG00000003606	atxn2	99	80.402	Oryzias_latipes
ENSHCOG00000005278	atxn2	96	78.877	ENSORLG00020000785	atxn2	99	79.524	Oryzias_latipes_hni
ENSHCOG00000005278	atxn2	95	79.847	ENSORLG00015012345	atxn2	99	80.190	Oryzias_latipes_hsok
ENSHCOG00000005278	atxn2	96	79.012	ENSOMEG00000020080	atxn2	99	79.561	Oryzias_melastigma
ENSHCOG00000005278	atxn2	93	67.541	ENSOGAG00000000609	ATXN2	80	65.789	Otolemur_garnettii
ENSHCOG00000005278	atxn2	94	68.239	ENSOARG00000018223	ATXN2	96	66.372	Ovis_aries
ENSHCOG00000005278	atxn2	94	67.712	ENSPPAG00000028043	ATXN2	96	66.349	Pan_paniscus
ENSHCOG00000005278	atxn2	93	68.525	ENSPPRG00000003573	ATXN2	95	61.905	Panthera_pardus
ENSHCOG00000005278	atxn2	92	69.048	ENSPTIG00000021122	ATXN2	96	66.984	Panthera_tigris_altaica
ENSHCOG00000005278	atxn2	95	65.951	ENSPTRG00000029540	ATXN2	96	66.349	Pan_troglodytes
ENSHCOG00000005278	atxn2	92	68.027	ENSPANG00000017168	ATXN2	96	66.032	Papio_anubis
ENSHCOG00000005278	atxn2	94	69.553	ENSPKIG00000023134	atxn2	99	68.130	Paramormyrops_kingsleyae
ENSHCOG00000005278	atxn2	92	85.467	ENSPMGG00000005074	atxn2	97	77.679	Periophthalmus_magnuspinnatus
ENSHCOG00000005278	atxn2	62	53.372	ENSPEMG00000015340	Atxn2	98	52.933	Peromyscus_maniculatus_bairdii
ENSHCOG00000005278	atxn2	54	70.149	ENSPCIG00000006165	-	91	67.488	Phascolarctos_cinereus
ENSHCOG00000005278	atxn2	93	82.347	ENSPLAG00000015241	atxn2	99	81.705	Poecilia_latipinna
ENSHCOG00000005278	atxn2	93	82.742	ENSPMEG00000016681	atxn2	99	82.088	Poecilia_mexicana
ENSHCOG00000005278	atxn2	92	85.859	ENSPREG00000014825	atxn2	99	81.369	Poecilia_reticulata
ENSHCOG00000005278	atxn2	93	67.541	ENSPPYG00000004963	ATXN2	83	65.789	Pongo_abelii
ENSHCOG00000005278	atxn2	91	67.014	ENSPCOG00000022031	ATXN2	95	65.357	Propithecus_coquereli
ENSHCOG00000005278	atxn2	92	68.197	ENSPVAG00000013179	ATXN2	78	66.082	Pteropus_vampyrus
ENSHCOG00000005278	atxn2	50	87.333	ENSPNYG00000016981	atxn2	97	84.667	Pundamilia_nyererei
ENSHCOG00000005278	atxn2	96	70.977	ENSPNAG00000010889	atxn2	99	70.263	Pygocentrus_nattereri
ENSHCOG00000005278	atxn2	94	67.712	ENSRNOG00000001256	Atxn2	95	65.882	Rattus_norvegicus
ENSHCOG00000005278	atxn2	92	65.646	ENSRBIG00000039212	ATXN2	96	63.810	Rhinopithecus_bieti
ENSHCOG00000005278	atxn2	93	67.619	ENSRROG00000031170	ATXN2	96	66.349	Rhinopithecus_roxellana
ENSHCOG00000005278	atxn2	92	68.027	ENSSBOG00000031563	ATXN2	96	66.032	Saimiri_boliviensis_boliviensis
ENSHCOG00000005278	atxn2	94	68.553	ENSSHAG00000007304	ATXN2	96	66.667	Sarcophilus_harrisii
ENSHCOG00000005278	atxn2	92	76.552	ENSSFOG00015017229	atxn2	96	72.586	Scleropages_formosus
ENSHCOG00000005278	atxn2	91	87.797	ENSSMAG00000004627	atxn2	99	83.619	Scophthalmus_maximus
ENSHCOG00000005278	atxn2	96	85.430	ENSSDUG00000001223	atxn2	99	84.137	Seriola_dumerili
ENSHCOG00000005278	atxn2	64	76.657	ENSSLDG00000019837	atxn2	99	69.666	Seriola_lalandi_dorsalis
ENSHCOG00000005278	atxn2	61	66.798	ENSSARG00000006291	ATXN2	67	66.270	Sorex_araneus
ENSHCOG00000005278	atxn2	92	67.961	ENSSPUG00000010317	ATXN2	88	66.061	Sphenodon_punctatus
ENSHCOG00000005278	atxn2	97	84.176	ENSSPAG00000000377	atxn2	99	84.176	Stegastes_partitus
ENSHCOG00000005278	atxn2	94	68.038	ENSSSCG00000009834	ATXN2	90	66.082	Sus_scrofa
ENSHCOG00000005278	atxn2	93	56.180	ENSTGUG00000006497	ATXN2	99	56.769	Taeniopygia_guttata
ENSHCOG00000005278	atxn2	97	82.899	ENSTRUG00000016801	atxn2	99	78.858	Takifugu_rubripes
ENSHCOG00000005278	atxn2	81	64.286	ENSTBEG00000001985	ATXN2	79	64.286	Tupaia_belangeri
ENSHCOG00000005278	atxn2	82	64.918	ENSTTRG00000000952	ATXN2	72	63.393	Tursiops_truncatus
ENSHCOG00000005278	atxn2	93	68.197	ENSUAMG00000025295	ATXN2	90	65.982	Ursus_americanus
ENSHCOG00000005278	atxn2	92	69.048	ENSUMAG00000007315	ATXN2	96	66.984	Ursus_maritimus
ENSHCOG00000005278	atxn2	92	69.048	ENSVVUG00000016107	ATXN2	96	66.984	Vulpes_vulpes
ENSHCOG00000005278	atxn2	92	65.916	ENSXETG00000020912	atxn2	96	64.157	Xenopus_tropicalis
ENSHCOG00000005278	atxn2	56	74.267	ENSXCOG00000010001	atxn2	98	75.828	Xiphophorus_couchianus
ENSHCOG00000005278	atxn2	93	81.818	ENSXMAG00000003481	atxn2	99	81.905	Xiphophorus_maculatus