EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005403 (Gene tree)
Gene ID: 109512375
Gene Symbol: srrt
Alias: CHUNP6881|ars2|zgc:92060
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 9629 bases
Position: chrKV879821.1:839292-848920
Accession: 109512375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000019813	ARS2	PF04959.13	4.9e-85	1	1
ENSHCOP00000004005	ARS2	PF04959.13	8.7e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007801	-	2454	-	ENSHCOP00000004005	817 (aa)	-	-
ENSHCOT00000007783	-	4762	XM_019864033	ENSHCOP00000019813	869 (aa)	XP_019719592	UPI00094E9B1F

Gene Model

Click here to download ENSHCOG00000005403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005403	srrt	92	56.338	ENSHCOG00000008904	-	97	56.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005403	srrt	56	72.174	ENSG00000087087	SRRT	98	83.871	Homo_sapiens
ENSHCOG00000005403	srrt	95	83.948	ENSAPOG00000002304	srrt	98	84.687	Acanthochromis_polyacanthus
ENSHCOG00000005403	srrt	96	62.950	ENSAMEG00000014506	SRRT	98	63.636	Ailuropoda_melanoleuca
ENSHCOG00000005403	srrt	95	81.841	ENSACIG00000015795	srrt	95	86.765	Amphilophus_citrinellus
ENSHCOG00000005403	srrt	93	54.965	ENSAOCG00000009189	-	98	57.517	Amphiprion_ocellaris
ENSHCOG00000005403	srrt	95	83.909	ENSAOCG00000009693	srrt	98	84.884	Amphiprion_ocellaris
ENSHCOG00000005403	srrt	95	83.552	ENSAPEG00000003646	srrt	96	87.029	Amphiprion_percula
ENSHCOG00000005403	srrt	93	54.965	ENSAPEG00000020016	-	98	57.517	Amphiprion_percula
ENSHCOG00000005403	srrt	95	81.459	ENSATEG00000014425	srrt	98	83.450	Anabas_testudineus
ENSHCOG00000005403	srrt	58	62.168	ENSATEG00000003652	-	88	63.278	Anabas_testudineus
ENSHCOG00000005403	srrt	56	71.121	ENSACAG00000001014	SRRT	98	63.869	Anolis_carolinensis
ENSHCOG00000005403	srrt	56	71.398	ENSANAG00000031718	SRRT	98	62.486	Aotus_nancymaae
ENSHCOG00000005403	srrt	93	52.210	ENSACLG00000009423	-	98	54.784	Astatotilapia_calliptera
ENSHCOG00000005403	srrt	95	80.861	ENSACLG00000013156	srrt	94	82.751	Astatotilapia_calliptera
ENSHCOG00000005403	srrt	55	76.821	ENSAMXG00000016671	srrt	95	71.972	Astyanax_mexicanus
ENSHCOG00000005403	srrt	92	71.183	ENSBTAG00000001134	SRRT	98	62.471	Bos_taurus
ENSHCOG00000005403	srrt	70	41.167	WBGene00017085	E01A2.2	90	41.800	Caenorhabditis_elegans
ENSHCOG00000005403	srrt	56	70.968	ENSCJAG00000014917	SRRT	98	62.372	Callithrix_jacchus
ENSHCOG00000005403	srrt	96	63.605	ENSCAFG00000023538	SRRT	98	63.054	Canis_familiaris
ENSHCOG00000005403	srrt	98	62.844	ENSCAFG00020013358	SRRT	98	63.232	Canis_lupus_dingo
ENSHCOG00000005403	srrt	94	71.800	ENSCHIG00000010495	SRRT	98	62.937	Capra_hircus
ENSHCOG00000005403	srrt	96	60.542	ENSTSYG00000036426	SRRT	99	61.820	Carlito_syrichta
ENSHCOG00000005403	srrt	95	61.905	ENSCAPG00000013586	SRRT	100	62.813	Cavia_aperea
ENSHCOG00000005403	srrt	56	71.030	ENSCPOG00000001739	SRRT	98	62.558	Cavia_porcellus
ENSHCOG00000005403	srrt	56	71.398	ENSCCAG00000015877	SRRT	98	62.486	Cebus_capucinus
ENSHCOG00000005403	srrt	92	71.800	ENSCATG00000036306	SRRT	98	62.989	Cercocebus_atys
ENSHCOG00000005403	srrt	96	63.012	ENSCLAG00000007568	SRRT	98	63.507	Chinchilla_lanigera
ENSHCOG00000005403	srrt	92	71.398	ENSCSAG00000017996	SRRT	98	62.929	Chlorocebus_sabaeus
ENSHCOG00000005403	srrt	57	67.846	ENSCHOG00000007815	SRRT	67	67.846	Choloepus_hoffmanni
ENSHCOG00000005403	srrt	95	52.874	ENSCPBG00000011553	SRRT	87	64.983	Chrysemys_picta_bellii
ENSHCOG00000005403	srrt	100	40.216	ENSCING00000003506	-	86	43.350	Ciona_intestinalis
ENSHCOG00000005403	srrt	100	41.026	ENSCSAVG00000008394	-	81	55.014	Ciona_savignyi
ENSHCOG00000005403	srrt	52	72.017	ENSCANG00000034556	SRRT	98	63.061	Colobus_angolensis_palliatus
ENSHCOG00000005403	srrt	96	62.456	ENSCGRG00001001594	Srrt	98	63.170	Cricetulus_griseus_chok1gshd
ENSHCOG00000005403	srrt	96	55.076	ENSCGRG00000007292	Srrt	89	68.737	Cricetulus_griseus_crigri
ENSHCOG00000005403	srrt	57	62.893	ENSCSEG00000005233	-	56	63.694	Cynoglossus_semilaevis
ENSHCOG00000005403	srrt	98	73.387	ENSCSEG00000017878	srrt	98	75.806	Cynoglossus_semilaevis
ENSHCOG00000005403	srrt	95	82.796	ENSCVAG00000019848	srrt	98	83.100	Cyprinodon_variegatus
ENSHCOG00000005403	srrt	90	54.672	ENSCVAG00000017344	-	98	56.618	Cyprinodon_variegatus
ENSHCOG00000005403	srrt	96	75.117	ENSDARG00000017762	srrt	98	74.800	Danio_rerio
ENSHCOG00000005403	srrt	52	71.613	ENSDNOG00000003851	SRRT	98	63.532	Dasypus_novemcinctus
ENSHCOG00000005403	srrt	96	62.768	ENSDORG00000005584	Srrt	98	62.763	Dipodomys_ordii
ENSHCOG00000005403	srrt	91	50.202	FBgn0033062	Ars2	73	52.532	Drosophila_melanogaster
ENSHCOG00000005403	srrt	79	69.388	ENSETEG00000016175	SRRT	73	69.133	Echinops_telfairi
ENSHCOG00000005403	srrt	76	53.555	ENSEBUG00000008517	-	88	53.016	Eptatretus_burgeri
ENSHCOG00000005403	srrt	96	62.412	ENSEASG00005016956	SRRT	98	63.054	Equus_asinus_asinus
ENSHCOG00000005403	srrt	96	62.412	ENSECAG00000012292	SRRT	98	63.054	Equus_caballus
ENSHCOG00000005403	srrt	81	77.083	ENSEEUG00000009117	SRRT	83	71.681	Erinaceus_europaeus
ENSHCOG00000005403	srrt	96	72.350	ENSELUG00000006651	srrt	98	71.348	Esox_lucius
ENSHCOG00000005403	srrt	93	57.757	ENSELUG00000021216	-	98	59.065	Esox_lucius
ENSHCOG00000005403	srrt	96	63.139	ENSFCAG00000006855	SRRT	98	63.170	Felis_catus
ENSHCOG00000005403	srrt	54	48.101	ENSFALG00000007524	-	77	70.370	Ficedula_albicollis
ENSHCOG00000005403	srrt	52	68.958	ENSFDAG00000021347	SRRT	98	62.194	Fukomys_damarensis
ENSHCOG00000005403	srrt	82	84.252	ENSFHEG00000002756	srrt	93	84.727	Fundulus_heteroclitus
ENSHCOG00000005403	srrt	57	56.341	ENSFHEG00000004105	-	96	56.224	Fundulus_heteroclitus
ENSHCOG00000005403	srrt	96	72.414	ENSGMOG00000018619	srrt	98	72.093	Gadus_morhua
ENSHCOG00000005403	srrt	87	64.494	ENSGMOG00000018694	-	98	54.126	Gadus_morhua
ENSHCOG00000005403	srrt	95	80.861	ENSGAFG00000005423	srrt	98	81.702	Gambusia_affinis
ENSHCOG00000005403	srrt	92	55.260	ENSGAFG00000020383	-	98	56.295	Gambusia_affinis
ENSHCOG00000005403	srrt	59	58.635	ENSGACG00000001100	-	54	61.715	Gasterosteus_aculeatus
ENSHCOG00000005403	srrt	96	82.346	ENSGACG00000020387	srrt	98	81.871	Gasterosteus_aculeatus
ENSHCOG00000005403	srrt	56	71.800	ENSGGOG00000001508	SRRT	97	63.158	Gorilla_gorilla
ENSHCOG00000005403	srrt	95	80.981	ENSHBUG00000002942	srrt	94	82.984	Haplochromis_burtoni
ENSHCOG00000005403	srrt	96	62.633	ENSHGLG00000008344	Srrt	98	62.116	Heterocephalus_glaber_female
ENSHCOG00000005403	srrt	96	63.082	ENSHGLG00100018857	Srrt	98	62.976	Heterocephalus_glaber_male
ENSHCOG00000005403	srrt	93	71.065	ENSIPUG00000021150	srrt	98	71.200	Ictalurus_punctatus
ENSHCOG00000005403	srrt	56	71.800	ENSSTOG00000013776	SRRT	98	62.998	Ictidomys_tridecemlineatus
ENSHCOG00000005403	srrt	96	63.389	ENSJJAG00000010446	Srrt	98	64.028	Jaculus_jaculus
ENSHCOG00000005403	srrt	95	79.810	ENSKMAG00000013599	srrt	98	80.952	Kryptolebias_marmoratus
ENSHCOG00000005403	srrt	57	61.633	ENSKMAG00000008468	-	98	54.463	Kryptolebias_marmoratus
ENSHCOG00000005403	srrt	98	80.120	ENSLBEG00000016308	srrt	91	85.685	Labrus_bergylta
ENSHCOG00000005403	srrt	62	63.514	ENSLBEG00000028983	-	97	50.396	Labrus_bergylta
ENSHCOG00000005403	srrt	95	54.064	ENSLACG00000001089	SRRT	98	54.566	Latimeria_chalumnae
ENSHCOG00000005403	srrt	80	78.594	ENSLOCG00000013658	srrt	96	79.233	Lepisosteus_oculatus
ENSHCOG00000005403	srrt	56	71.613	ENSLAFG00000007725	SRRT	98	63.563	Loxodonta_africana
ENSHCOG00000005403	srrt	92	71.800	ENSMFAG00000033745	SRRT	98	63.103	Macaca_fascicularis
ENSHCOG00000005403	srrt	92	71.398	ENSMMUG00000021255	SRRT	98	62.929	Macaca_mulatta
ENSHCOG00000005403	srrt	92	71.398	ENSMNEG00000041864	SRRT	98	63.043	Macaca_nemestrina
ENSHCOG00000005403	srrt	92	71.800	ENSMLEG00000029479	SRRT	98	63.103	Mandrillus_leucophaeus
ENSHCOG00000005403	srrt	83	63.990	ENSMAMG00000010681	-	98	57.865	Mastacembelus_armatus
ENSHCOG00000005403	srrt	95	82.895	ENSMAMG00000014311	srrt	98	83.566	Mastacembelus_armatus
ENSHCOG00000005403	srrt	95	80.981	ENSMZEG00005016135	srrt	94	82.867	Maylandia_zebra
ENSHCOG00000005403	srrt	93	52.330	ENSMZEG00005028002	-	90	65.517	Maylandia_zebra
ENSHCOG00000005403	srrt	96	61.871	ENSMAUG00000011386	Srrt	95	66.061	Mesocricetus_auratus
ENSHCOG00000005403	srrt	56	71.613	ENSMICG00000009471	SRRT	98	62.821	Microcebus_murinus
ENSHCOG00000005403	srrt	96	62.763	ENSMOCG00000001971	Srrt	98	63.470	Microtus_ochrogaster
ENSHCOG00000005403	srrt	95	80.669	ENSMMOG00000016399	srrt	98	81.039	Mola_mola
ENSHCOG00000005403	srrt	75	65.302	ENSMMOG00000011137	-	85	66.091	Mola_mola
ENSHCOG00000005403	srrt	56	68.085	ENSMODG00000004862	SRRT	93	67.071	Monodelphis_domestica
ENSHCOG00000005403	srrt	69	47.425	ENSMALG00000005567	-	100	47.080	Monopterus_albus
ENSHCOG00000005403	srrt	90	77.000	ENSMALG00000018604	srrt	98	71.578	Monopterus_albus
ENSHCOG00000005403	srrt	96	62.632	MGP_CAROLIEiJ_G0027870	Srrt	100	69.403	Mus_caroli
ENSHCOG00000005403	srrt	96	62.632	ENSMUSG00000037364	Srrt	99	69.403	Mus_musculus
ENSHCOG00000005403	srrt	96	63.152	MGP_PahariEiJ_G0024456	Srrt	100	69.403	Mus_pahari
ENSHCOG00000005403	srrt	96	62.632	MGP_SPRETEiJ_G0028875	Srrt	100	69.403	Mus_spretus
ENSHCOG00000005403	srrt	96	62.708	ENSMPUG00000015839	SRRT	98	63.170	Mustela_putorius_furo
ENSHCOG00000005403	srrt	56	71.183	ENSMLUG00000009975	SRRT	98	62.937	Myotis_lucifugus
ENSHCOG00000005403	srrt	96	62.049	ENSNGAG00000023715	Srrt	100	62.032	Nannospalax_galili
ENSHCOG00000005403	srrt	98	79.907	ENSNBRG00000019100	srrt	98	81.564	Neolamprologus_brichardi
ENSHCOG00000005403	srrt	95	57.178	ENSNLEG00000011987	SRRT	99	56.459	Nomascus_leucogenys
ENSHCOG00000005403	srrt	96	53.434	ENSMEUG00000011941	SRRT	98	53.494	Notamacropus_eugenii
ENSHCOG00000005403	srrt	66	71.970	ENSOPRG00000002502	-	67	76.515	Ochotona_princeps
ENSHCOG00000005403	srrt	96	62.816	ENSODEG00000016856	SRRT	98	63.668	Octodon_degus
ENSHCOG00000005403	srrt	93	55.185	ENSONIG00000016080	-	98	55.493	Oreochromis_niloticus
ENSHCOG00000005403	srrt	93	85.560	ENSONIG00000004242	srrt	98	81.528	Oreochromis_niloticus
ENSHCOG00000005403	srrt	98	80.980	ENSORLG00000008120	srrt	98	81.330	Oryzias_latipes
ENSHCOG00000005403	srrt	98	80.863	ENSORLG00020003058	srrt	98	81.097	Oryzias_latipes_hni
ENSHCOG00000005403	srrt	98	80.630	ENSORLG00015008062	srrt	98	80.980	Oryzias_latipes_hsok
ENSHCOG00000005403	srrt	92	57.915	ENSOMEG00000006963	-	98	58.502	Oryzias_melastigma
ENSHCOG00000005403	srrt	98	81.680	ENSOMEG00000003155	srrt	95	85.169	Oryzias_melastigma
ENSHCOG00000005403	srrt	56	71.398	ENSOGAG00000017242	SRRT	98	62.821	Otolemur_garnettii
ENSHCOG00000005403	srrt	92	71.584	ENSOARG00000015645	SRRT	98	62.998	Ovis_aries
ENSHCOG00000005403	srrt	56	71.800	ENSPPAG00000041090	SRRT	98	63.001	Pan_paniscus
ENSHCOG00000005403	srrt	96	63.441	ENSPPRG00000009557	SRRT	98	63.466	Panthera_pardus
ENSHCOG00000005403	srrt	96	62.708	ENSPTIG00000014355	SRRT	98	63.054	Panthera_tigris_altaica
ENSHCOG00000005403	srrt	56	71.800	ENSPTRG00000019511	SRRT	98	63.001	Pan_troglodytes
ENSHCOG00000005403	srrt	91	70.190	ENSPANG00000020763	SRRT	98	61.345	Papio_anubis
ENSHCOG00000005403	srrt	98	76.956	ENSPKIG00000005434	srrt	98	71.477	Paramormyrops_kingsleyae
ENSHCOG00000005403	srrt	94	68.999	ENSPKIG00000022212	-	98	69.213	Paramormyrops_kingsleyae
ENSHCOG00000005403	srrt	95	63.690	ENSPSIG00000016311	SRRT	98	64.261	Pelodiscus_sinensis
ENSHCOG00000005403	srrt	98	79.328	ENSPMGG00000002841	srrt	98	79.203	Periophthalmus_magnuspinnatus
ENSHCOG00000005403	srrt	96	62.648	ENSPEMG00000010834	Srrt	98	64.261	Peromyscus_maniculatus_bairdii
ENSHCOG00000005403	srrt	96	55.181	ENSPMAG00000009614	-	98	55.385	Petromyzon_marinus
ENSHCOG00000005403	srrt	96	62.354	ENSPCIG00000000816	SRRT	98	62.727	Phascolarctos_cinereus
ENSHCOG00000005403	srrt	95	81.243	ENSPFOG00000005704	srrt	98	82.072	Poecilia_formosa
ENSHCOG00000005403	srrt	92	55.146	ENSPFOG00000016554	-	98	56.590	Poecilia_formosa
ENSHCOG00000005403	srrt	92	54.789	ENSPLAG00000004526	-	98	56.265	Poecilia_latipinna
ENSHCOG00000005403	srrt	95	80.024	ENSPLAG00000021992	srrt	98	80.530	Poecilia_latipinna
ENSHCOG00000005403	srrt	88	54.631	ENSPMEG00000001520	-	96	56.187	Poecilia_mexicana
ENSHCOG00000005403	srrt	95	80.884	ENSPMEG00000001182	srrt	98	81.352	Poecilia_mexicana
ENSHCOG00000005403	srrt	95	81.026	ENSPREG00000022308	srrt	98	81.607	Poecilia_reticulata
ENSHCOG00000005403	srrt	54	62.581	ENSPPYG00000017432	SRRT	98	54.430	Pongo_abelii
ENSHCOG00000005403	srrt	52	69.767	ENSPCAG00000001621	SRRT	98	61.921	Procavia_capensis
ENSHCOG00000005403	srrt	56	71.800	ENSPCOG00000025751	SRRT	98	62.471	Propithecus_coquereli
ENSHCOG00000005403	srrt	73	63.559	ENSPVAG00000000834	SRRT	100	54.701	Pteropus_vampyrus
ENSHCOG00000005403	srrt	95	81.100	ENSPNYG00000018710	srrt	98	83.100	Pundamilia_nyererei
ENSHCOG00000005403	srrt	90	61.111	ENSPNAG00000010629	srrt	97	59.887	Pygocentrus_nattereri
ENSHCOG00000005403	srrt	56	62.609	ENSRNOG00000048277	AABR07035787.1	96	61.795	Rattus_norvegicus
ENSHCOG00000005403	srrt	92	71.398	ENSRBIG00000035718	SRRT	98	62.929	Rhinopithecus_bieti
ENSHCOG00000005403	srrt	92	71.398	ENSRROG00000030622	SRRT	98	62.929	Rhinopithecus_roxellana
ENSHCOG00000005403	srrt	56	71.800	ENSSBOG00000033570	SRRT	98	62.486	Saimiri_boliviensis_boliviensis
ENSHCOG00000005403	srrt	72	59.724	ENSSHAG00000007349	-	99	58.994	Sarcophilus_harrisii
ENSHCOG00000005403	srrt	94	72.575	ENSSFOG00015017293	srrt	98	73.570	Scleropages_formosus
ENSHCOG00000005403	srrt	56	61.277	ENSSMAG00000018195	-	97	55.971	Scophthalmus_maximus
ENSHCOG00000005403	srrt	95	83.971	ENSSMAG00000015342	srrt	98	83.897	Scophthalmus_maximus
ENSHCOG00000005403	srrt	56	55.252	ENSSDUG00000002051	-	99	54.141	Seriola_dumerili
ENSHCOG00000005403	srrt	95	84.707	ENSSDUG00000012049	srrt	98	83.612	Seriola_dumerili
ENSHCOG00000005403	srrt	89	86.765	ENSSLDG00000017477	srrt	92	87.031	Seriola_lalandi_dorsalis
ENSHCOG00000005403	srrt	95	82.779	ENSSPAG00000005665	srrt	96	84.473	Stegastes_partitus
ENSHCOG00000005403	srrt	56	56.410	ENSSPAG00000018943	-	96	56.871	Stegastes_partitus
ENSHCOG00000005403	srrt	53	70.362	ENSSSCG00000024789	SRRT	99	60.494	Sus_scrofa
ENSHCOG00000005403	srrt	98	80.139	ENSTRUG00000016075	srrt	98	80.139	Takifugu_rubripes
ENSHCOG00000005403	srrt	90	53.711	ENSTRUG00000000023	-	96	53.938	Takifugu_rubripes
ENSHCOG00000005403	srrt	74	72.932	ENSTNIG00000011779	srrt	100	73.494	Tetraodon_nigroviridis
ENSHCOG00000005403	srrt	93	52.738	ENSTNIG00000003111	-	98	53.584	Tetraodon_nigroviridis
ENSHCOG00000005403	srrt	63	76.596	ENSTBEG00000005212	SRRT	63	76.596	Tupaia_belangeri
ENSHCOG00000005403	srrt	52	71.398	ENSTTRG00000011104	SRRT	98	62.747	Tursiops_truncatus
ENSHCOG00000005403	srrt	95	62.888	ENSUAMG00000027997	SRRT	98	62.649	Ursus_americanus
ENSHCOG00000005403	srrt	96	63.020	ENSUMAG00000011295	SRRT	98	62.937	Ursus_maritimus
ENSHCOG00000005403	srrt	96	63.605	ENSVVUG00000023572	SRRT	98	63.054	Vulpes_vulpes
ENSHCOG00000005403	srrt	77	74.157	ENSXETG00000025124	srrt	76	75.843	Xenopus_tropicalis
ENSHCOG00000005403	srrt	62	48.723	ENSXCOG00000013105	-	95	51.148	Xiphophorus_couchianus
ENSHCOG00000005403	srrt	92	55.457	ENSXMAG00000002090	-	98	56.659	Xiphophorus_maculatus
ENSHCOG00000005403	srrt	98	81.214	ENSXMAG00000007627	srrt	98	82.284	Xiphophorus_maculatus