EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHCOG00000005421 (Gene tree)
Gene ID: 109531831
Gene Symbol: utp20
Alias: im:7159098|wu:fb83c08
Full Name: UTP20%2C small subunit processome component
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 23710 bases
Position: chrKV880449.1:366547-390256
Accession: 109531831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000002557	DRIM	PF07539.12	1.9e-140	1	2
ENSHCOP00000002557	DRIM	PF07539.12	1.9e-140	2	2
ENSHCOP00000002335	DRIM	PF07539.12	1.9e-140	1	2
ENSHCOP00000002335	DRIM	PF07539.12	1.9e-140	2	2
ENSHCOP00000018724	DRIM	PF07539.12	2.1e-140	1	2
ENSHCOP00000018724	DRIM	PF07539.12	2.1e-140	2	2
ENSHCOP00000018704	DRIM	PF07539.12	8.9e-140	1	2
ENSHCOP00000018704	DRIM	PF07539.12	8.9e-140	2	2
ENSHCOP00000002251	DRIM	PF07539.12	5.5e-138	1	2
ENSHCOP00000002251	DRIM	PF07539.12	5.5e-138	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000010220	-	8217	-	ENSHCOP00000002557	2738 (aa)	-	-
ENSHCOT00000010526	-	8127	-	ENSHCOP00000018724	2708 (aa)	-	-
ENSHCOT00000010570	-	8097	-	ENSHCOP00000018704	2698 (aa)	-	-
ENSHCOT00000010595	-	8082	-	ENSHCOP00000002335	2693 (aa)	-	-
ENSHCOT00000010730	-	8040	XM_019896333	ENSHCOP00000002251	2679 (aa)	XP_019751892	-

Gene Model

Click here to download ENSHCOG00000005421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005421	utp20	99	54.613	ENSG00000120800	UTP20	100	53.594	Homo_sapiens
ENSHCOG00000005421	utp20	98	79.003	ENSAPOG00000002429	utp20	94	81.203	Acanthochromis_polyacanthus
ENSHCOG00000005421	utp20	99	53.601	ENSAMEG00000016416	UTP20	100	53.497	Ailuropoda_melanoleuca
ENSHCOG00000005421	utp20	99	76.989	ENSACIG00000007987	utp20	97	76.959	Amphilophus_citrinellus
ENSHCOG00000005421	utp20	58	82.262	ENSAOCG00000015055	utp20	89	82.262	Amphiprion_ocellaris
ENSHCOG00000005421	utp20	97	81.579	ENSAPEG00000011605	utp20	94	81.579	Amphiprion_percula
ENSHCOG00000005421	utp20	98	73.132	ENSATEG00000005601	utp20	99	72.930	Anabas_testudineus
ENSHCOG00000005421	utp20	97	57.540	ENSAPLG00000015651	UTP20	100	53.594	Anas_platyrhynchos
ENSHCOG00000005421	utp20	99	54.297	ENSACAG00000011671	UTP20	100	53.775	Anolis_carolinensis
ENSHCOG00000005421	utp20	99	52.969	ENSANAG00000027152	UTP20	100	52.208	Aotus_nancymaae
ENSHCOG00000005421	utp20	96	77.802	ENSACLG00000008064	utp20	99	77.849	Astatotilapia_calliptera
ENSHCOG00000005421	utp20	97	69.173	ENSAMXG00000021039	utp20	100	61.370	Astyanax_mexicanus
ENSHCOG00000005421	utp20	97	57.714	ENSBTAG00000003239	UTP20	100	54.058	Bos_taurus
ENSHCOG00000005421	utp20	100	53.395	ENSCJAG00000001913	UTP20	100	52.866	Callithrix_jacchus
ENSHCOG00000005421	utp20	99	53.559	ENSCAFG00000006964	UTP20	100	53.096	Canis_familiaris
ENSHCOG00000005421	utp20	99	53.523	ENSCAFG00020024305	UTP20	100	53.060	Canis_lupus_dingo
ENSHCOG00000005421	utp20	99	54.409	ENSCHIG00000009221	UTP20	100	53.852	Capra_hircus
ENSHCOG00000005421	utp20	99	53.781	ENSTSYG00000003040	UTP20	100	53.129	Carlito_syrichta
ENSHCOG00000005421	utp20	99	50.540	ENSCAPG00000014920	UTP20	100	50.215	Cavia_aperea
ENSHCOG00000005421	utp20	100	52.255	ENSCPOG00000003129	UTP20	100	51.816	Cavia_porcellus
ENSHCOG00000005421	utp20	99	53.625	ENSCCAG00000031422	UTP20	100	53.219	Cebus_capucinus
ENSHCOG00000005421	utp20	99	52.503	ENSCATG00000035636	UTP20	100	51.381	Cercocebus_atys
ENSHCOG00000005421	utp20	99	54.089	ENSCLAG00000011569	UTP20	100	53.450	Chinchilla_lanigera
ENSHCOG00000005421	utp20	99	54.262	ENSCSAG00000003388	UTP20	100	53.578	Chlorocebus_sabaeus
ENSHCOG00000005421	utp20	92	69.697	ENSCHOG00000003532	UTP20	94	69.697	Choloepus_hoffmanni
ENSHCOG00000005421	utp20	93	58.647	ENSCPBG00000004844	UTP20	96	58.060	Chrysemys_picta_bellii
ENSHCOG00000005421	utp20	93	30.591	ENSCING00000003395	-	91	31.263	Ciona_intestinalis
ENSHCOG00000005421	utp20	91	30.912	ENSCSAVG00000008252	-	93	30.467	Ciona_savignyi
ENSHCOG00000005421	utp20	96	54.449	ENSCANG00000034768	UTP20	99	53.972	Colobus_angolensis_palliatus
ENSHCOG00000005421	utp20	99	54.136	ENSCGRG00001017151	Utp20	100	53.381	Cricetulus_griseus_chok1gshd
ENSHCOG00000005421	utp20	98	56.496	ENSCGRG00000008595	Utp20	100	53.096	Cricetulus_griseus_crigri
ENSHCOG00000005421	utp20	96	75.192	ENSCSEG00000014760	utp20	96	75.174	Cynoglossus_semilaevis
ENSHCOG00000005421	utp20	98	74.620	ENSCVAG00000001727	utp20	100	70.409	Cyprinodon_variegatus
ENSHCOG00000005421	utp20	97	69.925	ENSDARG00000099280	utp20	94	69.925	Danio_rerio
ENSHCOG00000005421	utp20	99	54.482	ENSDNOG00000016845	UTP20	100	53.378	Dasypus_novemcinctus
ENSHCOG00000005421	utp20	96	57.791	ENSDORG00000014762	Utp20	97	58.114	Dipodomys_ordii
ENSHCOG00000005421	utp20	89	71.014	ENSETEG00000019983	UTP20	89	71.014	Echinops_telfairi
ENSHCOG00000005421	utp20	99	53.816	ENSEASG00005019981	UTP20	100	53.390	Equus_asinus_asinus
ENSHCOG00000005421	utp20	99	53.852	ENSECAG00000006876	UTP20	100	53.426	Equus_caballus
ENSHCOG00000005421	utp20	73	64.286	ENSEEUG00000003774	UTP20	74	63.235	Erinaceus_europaeus
ENSHCOG00000005421	utp20	97	72.556	ENSELUG00000000798	utp20	96	72.255	Esox_lucius
ENSHCOG00000005421	utp20	99	53.660	ENSFCAG00000006150	UTP20	100	53.291	Felis_catus
ENSHCOG00000005421	utp20	93	54.849	ENSFALG00000011135	UTP20	100	52.394	Ficedula_albicollis
ENSHCOG00000005421	utp20	93	49.149	ENSFDAG00000007567	UTP20	94	68.595	Fukomys_damarensis
ENSHCOG00000005421	utp20	96	73.189	ENSFHEG00000004142	utp20	99	70.339	Fundulus_heteroclitus
ENSHCOG00000005421	utp20	97	71.053	ENSGMOG00000006762	utp20	93	71.053	Gadus_morhua
ENSHCOG00000005421	utp20	99	54.742	ENSGALG00000011643	UTP20	100	53.494	Gallus_gallus
ENSHCOG00000005421	utp20	96	73.813	ENSGAFG00000006986	utp20	96	74.097	Gambusia_affinis
ENSHCOG00000005421	utp20	98	78.195	ENSGACG00000019092	utp20	100	71.673	Gasterosteus_aculeatus
ENSHCOG00000005421	utp20	68	56.881	ENSGAGG00000011169	UTP20	93	60.763	Gopherus_agassizii
ENSHCOG00000005421	utp20	99	54.156	ENSGGOG00000004904	UTP20	100	53.006	Gorilla_gorilla
ENSHCOG00000005421	utp20	99	75.213	ENSHBUG00000010613	utp20	98	75.320	Haplochromis_burtoni
ENSHCOG00000005421	utp20	100	53.078	ENSHGLG00000006422	UTP20	100	52.739	Heterocephalus_glaber_female
ENSHCOG00000005421	utp20	100	51.809	ENSHGLG00100001086	UTP20	100	51.487	Heterocephalus_glaber_male
ENSHCOG00000005421	utp20	97	69.173	ENSIPUG00000013717	utp20	96	65.980	Ictalurus_punctatus
ENSHCOG00000005421	utp20	100	53.849	ENSSTOG00000015995	UTP20	100	53.587	Ictidomys_tridecemlineatus
ENSHCOG00000005421	utp20	99	54.051	ENSJJAG00000019321	Utp20	100	53.262	Jaculus_jaculus
ENSHCOG00000005421	utp20	100	68.387	ENSKMAG00000005972	utp20	100	69.101	Kryptolebias_marmoratus
ENSHCOG00000005421	utp20	96	75.876	ENSLBEG00000000781	utp20	96	76.038	Labrus_bergylta
ENSHCOG00000005421	utp20	79	55.580	ENSLACG00000010098	UTP20	99	56.123	Latimeria_chalumnae
ENSHCOG00000005421	utp20	92	66.765	ENSLOCG00000015197	utp20	94	74.419	Lepisosteus_oculatus
ENSHCOG00000005421	utp20	100	52.470	ENSLAFG00000012983	UTP20	100	52.673	Loxodonta_africana
ENSHCOG00000005421	utp20	99	54.367	ENSMFAG00000037766	UTP20	100	53.611	Macaca_fascicularis
ENSHCOG00000005421	utp20	99	54.314	ENSMMUG00000012891	UTP20	100	53.540	Macaca_mulatta
ENSHCOG00000005421	utp20	99	52.882	ENSMNEG00000037418	UTP20	100	51.832	Macaca_nemestrina
ENSHCOG00000005421	utp20	99	52.063	ENSMLEG00000029148	UTP20	100	51.601	Mandrillus_leucophaeus
ENSHCOG00000005421	utp20	98	78.451	ENSMAMG00000002063	utp20	96	78.249	Mastacembelus_armatus
ENSHCOG00000005421	utp20	99	74.142	ENSMZEG00005018123	utp20	100	72.747	Maylandia_zebra
ENSHCOG00000005421	utp20	99	54.560	ENSMGAG00000011726	UTP20	100	53.480	Meleagris_gallopavo
ENSHCOG00000005421	utp20	63	52.736	ENSMAUG00000011898	Utp20	99	51.271	Mesocricetus_auratus
ENSHCOG00000005421	utp20	99	52.969	ENSMICG00000015736	UTP20	100	51.532	Microcebus_murinus
ENSHCOG00000005421	utp20	99	53.915	ENSMOCG00000015242	Utp20	100	52.322	Microtus_ochrogaster
ENSHCOG00000005421	utp20	99	70.543	ENSMMOG00000003360	utp20	100	66.369	Mola_mola
ENSHCOG00000005421	utp20	99	53.702	ENSMODG00000003141	UTP20	100	53.625	Monodelphis_domestica
ENSHCOG00000005421	utp20	100	72.117	ENSMALG00000002723	utp20	100	71.986	Monopterus_albus
ENSHCOG00000005421	utp20	99	53.936	MGP_CAROLIEiJ_G0015713	Utp20	100	53.075	Mus_caroli
ENSHCOG00000005421	utp20	99	54.237	ENSMUSG00000004356	Utp20	100	53.340	Mus_musculus
ENSHCOG00000005421	utp20	99	54.468	MGP_PahariEiJ_G0031372	Utp20	100	53.165	Mus_pahari
ENSHCOG00000005421	utp20	99	54.184	MGP_SPRETEiJ_G0016531	Utp20	94	69.048	Mus_spretus
ENSHCOG00000005421	utp20	100	53.783	ENSMPUG00000011641	UTP20	100	53.286	Mustela_putorius_furo
ENSHCOG00000005421	utp20	99	53.579	ENSMLUG00000002313	UTP20	100	53.244	Myotis_lucifugus
ENSHCOG00000005421	utp20	99	53.769	ENSNGAG00000013738	Utp20	100	53.267	Nannospalax_galili
ENSHCOG00000005421	utp20	81	83.582	ENSNBRG00000019464	utp20	99	83.582	Neolamprologus_brichardi
ENSHCOG00000005421	utp20	99	54.642	ENSNLEG00000006166	UTP20	100	53.728	Nomascus_leucogenys
ENSHCOG00000005421	utp20	85	60.976	ENSMEUG00000015457	UTP20	83	60.976	Notamacropus_eugenii
ENSHCOG00000005421	utp20	86	72.611	ENSOPRG00000010546	UTP20	87	72.611	Ochotona_princeps
ENSHCOG00000005421	utp20	100	53.217	ENSODEG00000013411	UTP20	100	53.133	Octodon_degus
ENSHCOG00000005421	utp20	99	76.603	ENSONIG00000009910	utp20	97	76.282	Oreochromis_niloticus
ENSHCOG00000005421	utp20	99	53.540	ENSOANG00000005578	UTP20	99	53.262	Ornithorhynchus_anatinus
ENSHCOG00000005421	utp20	99	53.464	ENSOCUG00000010475	UTP20	100	53.321	Oryctolagus_cuniculus
ENSHCOG00000005421	utp20	95	71.130	ENSORLG00000008900	utp20	99	71.130	Oryzias_latipes
ENSHCOG00000005421	utp20	93	70.813	ENSORLG00020005879	utp20	99	71.130	Oryzias_latipes_hni
ENSHCOG00000005421	utp20	96	69.611	ENSORLG00015002843	utp20	99	66.262	Oryzias_latipes_hsok
ENSHCOG00000005421	utp20	96	74.584	ENSOMEG00000023583	utp20	96	74.965	Oryzias_melastigma
ENSHCOG00000005421	utp20	99	54.145	ENSOGAG00000015130	UTP20	100	53.006	Otolemur_garnettii
ENSHCOG00000005421	utp20	99	54.409	ENSOARG00000014722	UTP20	100	54.201	Ovis_aries
ENSHCOG00000005421	utp20	99	54.262	ENSPPAG00000001381	UTP20	100	53.559	Pan_paniscus
ENSHCOG00000005421	utp20	99	53.561	ENSPPRG00000001026	UTP20	100	53.219	Panthera_pardus
ENSHCOG00000005421	utp20	99	53.526	ENSPTIG00000020972	UTP20	100	53.238	Panthera_tigris_altaica
ENSHCOG00000005421	utp20	99	54.209	ENSPTRG00000005349	UTP20	100	53.594	Pan_troglodytes
ENSHCOG00000005421	utp20	99	54.372	ENSPANG00000020388	UTP20	100	53.435	Papio_anubis
ENSHCOG00000005421	utp20	98	65.200	ENSPKIG00000007196	utp20	96	64.903	Paramormyrops_kingsleyae
ENSHCOG00000005421	utp20	92	58.693	ENSPSIG00000016689	UTP20	100	54.528	Pelodiscus_sinensis
ENSHCOG00000005421	utp20	98	74.733	ENSPMGG00000004066	utp20	96	74.667	Periophthalmus_magnuspinnatus
ENSHCOG00000005421	utp20	99	54.714	ENSPEMG00000024120	Utp20	100	54.571	Peromyscus_maniculatus_bairdii
ENSHCOG00000005421	utp20	98	57.663	ENSPCIG00000009298	UTP20	99	57.663	Phascolarctos_cinereus
ENSHCOG00000005421	utp20	89	77.068	ENSPFOG00000003312	utp20	96	75.563	Poecilia_formosa
ENSHCOG00000005421	utp20	95	75.849	ENSPLAG00000012874	utp20	99	73.512	Poecilia_latipinna
ENSHCOG00000005421	utp20	96	75.472	ENSPMEG00000005915	utp20	99	72.553	Poecilia_mexicana
ENSHCOG00000005421	utp20	95	75.849	ENSPREG00000013285	utp20	96	72.990	Poecilia_reticulata
ENSHCOG00000005421	utp20	88	53.008	ENSPPYG00000004871	UTP20	100	52.810	Pongo_abelii
ENSHCOG00000005421	utp20	82	67.677	ENSPCAG00000012791	UTP20	82	67.677	Procavia_capensis
ENSHCOG00000005421	utp20	97	53.385	ENSPCOG00000024948	UTP20	100	52.974	Propithecus_coquereli
ENSHCOG00000005421	utp20	98	54.099	ENSPVAG00000008113	UTP20	100	51.959	Pteropus_vampyrus
ENSHCOG00000005421	utp20	98	80.451	ENSPNYG00000011561	utp20	95	80.451	Pundamilia_nyererei
ENSHCOG00000005421	utp20	97	68.561	ENSPNAG00000006176	utp20	100	62.040	Pygocentrus_nattereri
ENSHCOG00000005421	utp20	99	54.275	ENSRNOG00000005823	Utp20	100	53.293	Rattus_norvegicus
ENSHCOG00000005421	utp20	99	52.630	ENSRBIG00000025384	UTP20	100	52.009	Rhinopithecus_bieti
ENSHCOG00000005421	utp20	99	54.372	ENSRROG00000041254	UTP20	100	53.561	Rhinopithecus_roxellana
ENSHCOG00000005421	utp20	98	57.513	ENSSBOG00000035762	UTP20	100	53.027	Saimiri_boliviensis_boliviensis
ENSHCOG00000005421	utp20	98	51.997	ENSSHAG00000002298	UTP20	99	52.193	Sarcophilus_harrisii
ENSHCOG00000005421	utp20	97	67.366	ENSSFOG00015001674	utp20	96	66.913	Scleropages_formosus
ENSHCOG00000005421	utp20	95	80.451	ENSSMAG00000016460	utp20	96	76.794	Scophthalmus_maximus
ENSHCOG00000005421	utp20	98	79.449	ENSSDUG00000013730	utp20	96	79.042	Seriola_dumerili
ENSHCOG00000005421	utp20	97	81.203	ENSSLDG00000012844	utp20	96	79.034	Seriola_lalandi_dorsalis
ENSHCOG00000005421	utp20	63	68.519	ENSSARG00000002796	-	57	68.519	Sorex_araneus
ENSHCOG00000005421	utp20	99	53.338	ENSSPUG00000004513	UTP20	99	52.687	Sphenodon_punctatus
ENSHCOG00000005421	utp20	97	81.579	ENSSPAG00000014674	utp20	94	81.579	Stegastes_partitus
ENSHCOG00000005421	utp20	99	54.116	ENSSSCG00000000869	UTP20	100	53.849	Sus_scrofa
ENSHCOG00000005421	utp20	77	51.998	ENSTGUG00000009053	-	100	52.313	Taeniopygia_guttata
ENSHCOG00000005421	utp20	99	71.787	ENSTRUG00000005849	utp20	99	71.582	Takifugu_rubripes
ENSHCOG00000005421	utp20	99	72.229	ENSTNIG00000006921	utp20	98	72.695	Tetraodon_nigroviridis
ENSHCOG00000005421	utp20	91	51.941	ENSTBEG00000011917	UTP20	89	52.246	Tupaia_belangeri
ENSHCOG00000005421	utp20	99	53.791	ENSTTRG00000017195	UTP20	98	53.791	Tursiops_truncatus
ENSHCOG00000005421	utp20	99	53.483	ENSUAMG00000016363	UTP20	100	53.343	Ursus_americanus
ENSHCOG00000005421	utp20	99	53.172	ENSUMAG00000000077	UTP20	100	52.977	Ursus_maritimus
ENSHCOG00000005421	utp20	88	56.158	ENSVPAG00000011620	UTP20	92	54.852	Vicugna_pacos
ENSHCOG00000005421	utp20	99	53.469	ENSVVUG00000018110	UTP20	99	55.766	Vulpes_vulpes
ENSHCOG00000005421	utp20	98	53.101	ENSXETG00000032346	UTP20	99	52.937	Xenopus_tropicalis
ENSHCOG00000005421	utp20	96	76.604	ENSXMAG00000006503	utp20	96	73.311	Xiphophorus_maculatus