EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005566 (Gene tree)
Gene ID: 109531845
Gene Symbol: arl1
Alias: zgc:92883
Full Name: ADP ribosylation factor like GTPase 1
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Plus strand
Length: 2893 bases
Position: chrKV880449.1:363858-366750
Accession: 109531845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004162	MMR_HSR1	PF01926.23	1.6e-05	1	1
ENSHCOP00000019910	MMR_HSR1	PF01926.23	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007519	-	570	-	ENSHCOP00000019910	189 (aa)	-	-
ENSHCOT00000007508	-	1535	XM_019896360	ENSHCOP00000004162	181 (aa)	XP_019751919	UPI00094E41DF

Gene Model

Click here to download ENSHCOG00000005566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005566	arl1	86	31.138	ENSHCOG00000002845	sar1ab	67	31.138
ENSHCOG00000005566	arl1	99	48.333	ENSHCOG00000016616	ARL5A	100	48.333
ENSHCOG00000005566	arl1	88	30.539	ENSHCOG00000005512	-	89	30.539
ENSHCOG00000005566	arl1	83	45.098	ENSHCOG00000002573	arl11	86	45.098
ENSHCOG00000005566	arl1	91	40.936	ENSHCOG00000019844	-	88	40.936
ENSHCOG00000005566	arl1	100	36.316	ENSHCOG00000011881	arl4d	95	36.316
ENSHCOG00000005566	arl1	91	42.697	ENSHCOG00000009949	arl2	90	42.697
ENSHCOG00000005566	arl1	94	46.784	ENSHCOG00000017576	-	96	46.784
ENSHCOG00000005566	arl1	100	56.354	ENSHCOG00000003257	-	100	56.354
ENSHCOG00000005566	arl1	92	42.197	ENSHCOG00000006452	arl4aa	90	42.197
ENSHCOG00000005566	arl1	65	32.520	ENSHCOG00000001145	rab22a	63	32.520
ENSHCOG00000005566	arl1	100	39.062	ENSHCOG00000008536	-	95	39.062
ENSHCOG00000005566	arl1	94	40.000	ENSHCOG00000003724	ARL6	98	35.437
ENSHCOG00000005566	arl1	99	57.778	ENSHCOG00000020217	-	100	57.778
ENSHCOG00000005566	arl1	98	57.062	ENSHCOG00000015577	-	99	57.062
ENSHCOG00000005566	arl1	96	32.759	ENSHCOG00000010468	arl8bb	94	32.759
ENSHCOG00000005566	arl1	98	38.587	ENSHCOG00000008233	arl4cb	92	38.587
ENSHCOG00000005566	arl1	92	45.181	ENSHCOG00000015600	arl3	96	44.828
ENSHCOG00000005566	arl1	96	32.759	ENSHCOG00000000920	arl8ba	94	32.759
ENSHCOG00000005566	arl1	85	45.283	ENSHCOG00000009562	arl14	75	45.283
ENSHCOG00000005566	arl1	94	37.853	ENSHCOG00000014829	-	88	37.853
ENSHCOG00000005566	arl1	100	56.354	ENSHCOG00000003460	arf3a	100	56.354
ENSHCOG00000005566	arl1	100	42.077	ENSHCOG00000016255	arl3l2	99	42.077
ENSHCOG00000005566	arl1	100	58.011	ENSHCOG00000018128	ARF1	100	58.011
ENSHCOG00000005566	arl1	91	50.303	ENSHCOG00000015779	arl8	91	51.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005566	arl1	92	94.611	ENSG00000120805	ARL1	100	94.512	Homo_sapiens
ENSHCOG00000005566	arl1	100	97.238	ENSAPOG00000002469	arl1	100	97.238	Acanthochromis_polyacanthus
ENSHCOG00000005566	arl1	92	94.611	ENSAMEG00000016452	ARL1	99	94.444	Ailuropoda_melanoleuca
ENSHCOG00000005566	arl1	99	96.089	ENSACIG00000007953	arl1	100	96.089	Amphilophus_citrinellus
ENSHCOG00000005566	arl1	100	97.238	ENSAOCG00000013008	arl1	100	97.238	Amphiprion_ocellaris
ENSHCOG00000005566	arl1	100	97.238	ENSAPEG00000013187	arl1	100	97.238	Amphiprion_percula
ENSHCOG00000005566	arl1	99	97.765	ENSATEG00000005559	arl1	96	97.765	Anabas_testudineus
ENSHCOG00000005566	arl1	100	94.475	ENSAPLG00000016092	ARL1	100	94.475	Anas_platyrhynchos
ENSHCOG00000005566	arl1	100	95.580	ENSACAG00000011602	ARL1	100	95.580	Anolis_carolinensis
ENSHCOG00000005566	arl1	92	95.210	ENSANAG00000023491	ARL1	100	95.028	Aotus_nancymaae
ENSHCOG00000005566	arl1	100	98.343	ENSACLG00000008188	arl1	100	98.343	Astatotilapia_calliptera
ENSHCOG00000005566	arl1	100	97.790	ENSAMXG00000021056	arl1	100	97.790	Astyanax_mexicanus
ENSHCOG00000005566	arl1	92	95.210	ENSBTAG00000011883	ARL1	100	95.028	Bos_taurus
ENSHCOG00000005566	arl1	100	73.481	WBGene00000187	arl-1	100	73.481	Caenorhabditis_elegans
ENSHCOG00000005566	arl1	92	95.210	ENSCJAG00000001966	ARL1	100	95.028	Callithrix_jacchus
ENSHCOG00000005566	arl1	92	95.210	ENSCAFG00000006992	ARL1	100	95.028	Canis_familiaris
ENSHCOG00000005566	arl1	92	95.210	ENSCAFG00020024333	ARL1	100	95.028	Canis_lupus_dingo
ENSHCOG00000005566	arl1	94	95.294	ENSCHIG00000024524	ARL1	100	95.294	Capra_hircus
ENSHCOG00000005566	arl1	93	95.238	ENSTSYG00000013257	-	100	94.972	Carlito_syrichta
ENSHCOG00000005566	arl1	76	95.652	ENSCAPG00000001010	ARL1	100	95.652	Cavia_aperea
ENSHCOG00000005566	arl1	92	95.210	ENSCPOG00000026014	ARL1	100	95.028	Cavia_porcellus
ENSHCOG00000005566	arl1	92	95.210	ENSCCAG00000025938	ARL1	100	95.028	Cebus_capucinus
ENSHCOG00000005566	arl1	92	95.210	ENSCLAG00000008180	ARL1	100	94.475	Chinchilla_lanigera
ENSHCOG00000005566	arl1	92	94.611	ENSCSAG00000003368	ARL1	100	94.475	Chlorocebus_sabaeus
ENSHCOG00000005566	arl1	100	93.923	ENSCPBG00000004906	ARL1	100	93.923	Chrysemys_picta_bellii
ENSHCOG00000005566	arl1	99	80.000	ENSCING00000019794	-	100	80.000	Ciona_intestinalis
ENSHCOG00000005566	arl1	93	44.118	ENSCING00000004577	-	97	44.118	Ciona_intestinalis
ENSHCOG00000005566	arl1	99	79.444	ENSCSAVG00000007620	-	98	79.444	Ciona_savignyi
ENSHCOG00000005566	arl1	92	94.012	ENSCANG00000033548	ARL1	100	93.923	Colobus_angolensis_palliatus
ENSHCOG00000005566	arl1	92	95.808	ENSCGRG00001010446	Arl1	100	95.580	Cricetulus_griseus_chok1gshd
ENSHCOG00000005566	arl1	92	95.210	ENSCGRG00000009856	Arl1	90	94.475	Cricetulus_griseus_crigri
ENSHCOG00000005566	arl1	100	97.238	ENSCVAG00000001731	arl1	100	97.238	Cyprinodon_variegatus
ENSHCOG00000005566	arl1	100	98.343	ENSDARG00000101680	arl1	100	98.830	Danio_rerio
ENSHCOG00000005566	arl1	92	95.210	ENSDORG00000014770	Arl1	95	94.475	Dipodomys_ordii
ENSHCOG00000005566	arl1	100	79.558	FBgn0000115	Arl1	100	79.558	Drosophila_melanogaster
ENSHCOG00000005566	arl1	98	92.135	ENSETEG00000020310	ARL1	100	92.135	Echinops_telfairi
ENSHCOG00000005566	arl1	92	95.210	ENSEASG00005020057	ARL1	100	95.028	Equus_asinus_asinus
ENSHCOG00000005566	arl1	98	92.265	ENSECAG00000000372	ARL1	100	95.028	Equus_caballus
ENSHCOG00000005566	arl1	100	97.238	ENSELUG00000018440	arl1	100	97.238	Esox_lucius
ENSHCOG00000005566	arl1	100	96.133	ENSELUG00000001287	-	100	96.133	Esox_lucius
ENSHCOG00000005566	arl1	92	95.210	ENSFCAG00000030871	ARL1	100	95.028	Felis_catus
ENSHCOG00000005566	arl1	100	95.028	ENSFALG00000011156	ARL1	100	95.028	Ficedula_albicollis
ENSHCOG00000005566	arl1	92	95.210	ENSFDAG00000016393	ARL1	100	94.475	Fukomys_damarensis
ENSHCOG00000005566	arl1	99	97.765	ENSFHEG00000004171	arl1	95	97.765	Fundulus_heteroclitus
ENSHCOG00000005566	arl1	100	97.238	ENSGMOG00000006859	arl1	100	97.238	Gadus_morhua
ENSHCOG00000005566	arl1	100	95.028	ENSGALG00000011651	ARL1	100	95.028	Gallus_gallus
ENSHCOG00000005566	arl1	91	98.182	ENSGAFG00000006973	arl1	99	98.182	Gambusia_affinis
ENSHCOG00000005566	arl1	100	95.580	ENSGACG00000019098	arl1	100	95.580	Gasterosteus_aculeatus
ENSHCOG00000005566	arl1	92	94.611	ENSGGOG00000010788	ARL1	100	94.475	Gorilla_gorilla
ENSHCOG00000005566	arl1	100	98.343	ENSHBUG00000010636	arl1	100	98.343	Haplochromis_burtoni
ENSHCOG00000005566	arl1	92	95.808	ENSHGLG00000004909	ARL1	100	95.580	Heterocephalus_glaber_female
ENSHCOG00000005566	arl1	92	95.808	ENSHGLG00100001832	ARL1	100	95.028	Heterocephalus_glaber_male
ENSHCOG00000005566	arl1	99	97.207	ENSIPUG00000013834	arl1	96	97.207	Ictalurus_punctatus
ENSHCOG00000005566	arl1	92	95.210	ENSSTOG00000016022	ARL1	100	95.028	Ictidomys_tridecemlineatus
ENSHCOG00000005566	arl1	92	86.228	ENSJJAG00000000452	-	100	85.635	Jaculus_jaculus
ENSHCOG00000005566	arl1	86	99.355	ENSKMAG00000005931	arl1	84	99.359	Kryptolebias_marmoratus
ENSHCOG00000005566	arl1	96	95.977	ENSLBEG00000000991	arl1	99	95.977	Labrus_bergylta
ENSHCOG00000005566	arl1	92	95.210	ENSLAFG00000026143	ARL1	95	95.028	Loxodonta_africana
ENSHCOG00000005566	arl1	92	94.611	ENSMFAG00000035725	ARL1	100	94.475	Macaca_fascicularis
ENSHCOG00000005566	arl1	92	94.611	ENSMMUG00000031610	ARL1	100	93.923	Macaca_mulatta
ENSHCOG00000005566	arl1	92	94.611	ENSMNEG00000007067	ARL1	100	94.475	Macaca_nemestrina
ENSHCOG00000005566	arl1	91	94.512	ENSMLEG00000036143	ARL1	100	94.512	Mandrillus_leucophaeus
ENSHCOG00000005566	arl1	99	96.089	ENSMAMG00000001968	arl1	100	96.089	Mastacembelus_armatus
ENSHCOG00000005566	arl1	100	98.343	ENSMZEG00005018136	arl1	100	98.343	Maylandia_zebra
ENSHCOG00000005566	arl1	100	94.475	ENSMGAG00000011748	ARL1	100	94.475	Meleagris_gallopavo
ENSHCOG00000005566	arl1	92	95.808	ENSMAUG00000021923	Arl1	100	95.580	Mesocricetus_auratus
ENSHCOG00000005566	arl1	92	95.210	ENSMICG00000015801	ARL1	100	95.028	Microcebus_murinus
ENSHCOG00000005566	arl1	92	95.808	ENSMOCG00000005852	Arl1	100	95.580	Microtus_ochrogaster
ENSHCOG00000005566	arl1	96	93.103	ENSMMOG00000003353	arl1	71	92.737	Mola_mola
ENSHCOG00000005566	arl1	100	93.923	ENSMODG00000003056	ARL1	100	93.923	Monodelphis_domestica
ENSHCOG00000005566	arl1	99	94.972	ENSMALG00000003003	arl1	99	97.576	Monopterus_albus
ENSHCOG00000005566	arl1	92	95.808	MGP_CAROLIEiJ_G0015712	Arl1	100	95.580	Mus_caroli
ENSHCOG00000005566	arl1	92	95.808	ENSMUSG00000060904	Arl1	100	96.377	Mus_musculus
ENSHCOG00000005566	arl1	92	95.808	MGP_PahariEiJ_G0031373	Arl1	100	95.580	Mus_pahari
ENSHCOG00000005566	arl1	92	95.808	MGP_SPRETEiJ_G0016530	Arl1	100	95.580	Mus_spretus
ENSHCOG00000005566	arl1	92	94.643	ENSMPUG00000011822	ARL1	99	94.475	Mustela_putorius_furo
ENSHCOG00000005566	arl1	92	89.820	ENSMLUG00000025321	-	100	90.055	Myotis_lucifugus
ENSHCOG00000005566	arl1	87	96.203	ENSMLUG00000002351	-	100	95.349	Myotis_lucifugus
ENSHCOG00000005566	arl1	76	96.377	ENSNGAG00000007879	-	100	96.377	Nannospalax_galili
ENSHCOG00000005566	arl1	100	98.343	ENSNBRG00000019783	arl1	100	98.343	Neolamprologus_brichardi
ENSHCOG00000005566	arl1	91	94.512	ENSNLEG00000006223	ARL1	100	94.512	Nomascus_leucogenys
ENSHCOG00000005566	arl1	100	93.923	ENSMEUG00000015525	ARL1	95	93.923	Notamacropus_eugenii
ENSHCOG00000005566	arl1	92	95.808	ENSODEG00000019783	-	100	95.580	Octodon_degus
ENSHCOG00000005566	arl1	92	95.808	ENSODEG00000010531	-	100	95.556	Octodon_degus
ENSHCOG00000005566	arl1	92	94.012	ENSODEG00000019880	-	100	93.923	Octodon_degus
ENSHCOG00000005566	arl1	100	98.343	ENSONIG00000009921	arl1	100	98.343	Oreochromis_niloticus
ENSHCOG00000005566	arl1	92	95.210	ENSOCUG00000002217	ARL1	96	95.028	Oryctolagus_cuniculus
ENSHCOG00000005566	arl1	92	97.590	ENSORLG00000008909	arl1	98	97.590	Oryzias_latipes
ENSHCOG00000005566	arl1	100	98.343	ENSORLG00020005754	arl1	100	98.343	Oryzias_latipes_hni
ENSHCOG00000005566	arl1	100	98.343	ENSORLG00015002736	arl1	100	98.343	Oryzias_latipes_hsok
ENSHCOG00000005566	arl1	96	98.276	ENSOMEG00000023497	arl1	93	98.276	Oryzias_melastigma
ENSHCOG00000005566	arl1	92	94.611	ENSOGAG00000015144	ARL1	100	94.475	Otolemur_garnettii
ENSHCOG00000005566	arl1	92	95.210	ENSOARG00000015007	ARL1	100	95.028	Ovis_aries
ENSHCOG00000005566	arl1	92	94.611	ENSPPAG00000034860	ARL1	100	94.475	Pan_paniscus
ENSHCOG00000005566	arl1	92	95.210	ENSPPRG00000023908	ARL1	100	95.028	Panthera_pardus
ENSHCOG00000005566	arl1	93	95.238	ENSPTIG00000002154	-	100	94.972	Panthera_tigris_altaica
ENSHCOG00000005566	arl1	92	94.611	ENSPTRG00000005350	ARL1	100	94.475	Pan_troglodytes
ENSHCOG00000005566	arl1	95	94.186	ENSPANG00000018816	ARL1	97	94.413	Papio_anubis
ENSHCOG00000005566	arl1	100	97.238	ENSPKIG00000007118	arl1	100	98.171	Paramormyrops_kingsleyae
ENSHCOG00000005566	arl1	100	94.475	ENSPSIG00000006539	ARL1	100	94.475	Pelodiscus_sinensis
ENSHCOG00000005566	arl1	91	95.758	ENSPMGG00000004070	arl1	98	95.758	Periophthalmus_magnuspinnatus
ENSHCOG00000005566	arl1	92	95.808	ENSPEMG00000008781	Arl1	100	95.580	Peromyscus_maniculatus_bairdii
ENSHCOG00000005566	arl1	100	91.160	ENSPMAG00000002070	arl1	100	91.160	Petromyzon_marinus
ENSHCOG00000005566	arl1	99	93.889	ENSPCIG00000009683	-	97	93.889	Phascolarctos_cinereus
ENSHCOG00000005566	arl1	100	97.790	ENSPFOG00000003241	arl1	100	97.790	Poecilia_formosa
ENSHCOG00000005566	arl1	100	97.790	ENSPLAG00000012898	arl1	100	97.790	Poecilia_latipinna
ENSHCOG00000005566	arl1	99	97.778	ENSPMEG00000005938	arl1	96	97.778	Poecilia_mexicana
ENSHCOG00000005566	arl1	99	97.778	ENSPREG00000013361	arl1	96	97.778	Poecilia_reticulata
ENSHCOG00000005566	arl1	92	94.611	ENSPPYG00000004872	ARL1	100	94.475	Pongo_abelii
ENSHCOG00000005566	arl1	100	91.160	ENSPCOG00000015554	-	100	91.160	Propithecus_coquereli
ENSHCOG00000005566	arl1	92	95.210	ENSPVAG00000008119	ARL1	95	95.028	Pteropus_vampyrus
ENSHCOG00000005566	arl1	100	98.343	ENSPNYG00000011671	arl1	100	98.343	Pundamilia_nyererei
ENSHCOG00000005566	arl1	91	98.182	ENSPNAG00000028795	arl1	99	98.182	Pygocentrus_nattereri
ENSHCOG00000005566	arl1	92	95.808	ENSRNOG00000005763	Arl1	100	95.580	Rattus_norvegicus
ENSHCOG00000005566	arl1	92	94.611	ENSRBIG00000042560	ARL1	100	94.475	Rhinopithecus_bieti
ENSHCOG00000005566	arl1	92	94.611	ENSRROG00000037996	ARL1	100	94.475	Rhinopithecus_roxellana
ENSHCOG00000005566	arl1	92	95.210	ENSSBOG00000024352	-	100	95.028	Saimiri_boliviensis_boliviensis
ENSHCOG00000005566	arl1	100	93.370	ENSSHAG00000004634	ARL1	100	93.370	Sarcophilus_harrisii
ENSHCOG00000005566	arl1	100	97.238	ENSSFOG00015001665	arl1	100	97.238	Scleropages_formosus
ENSHCOG00000005566	arl1	100	97.238	ENSSMAG00000016416	arl1	100	97.238	Scophthalmus_maximus
ENSHCOG00000005566	arl1	93	95.266	ENSSDUG00000013898	arl1	95	95.266	Seriola_dumerili
ENSHCOG00000005566	arl1	100	97.238	ENSSLDG00000012946	arl1	100	97.238	Seriola_lalandi_dorsalis
ENSHCOG00000005566	arl1	93	94.048	ENSSARG00000013944	ARL1	100	93.855	Sorex_araneus
ENSHCOG00000005566	arl1	100	95.580	ENSSPUG00000004578	ARL1	100	95.580	Sphenodon_punctatus
ENSHCOG00000005566	arl1	100	96.685	ENSSPAG00000014633	arl1	100	96.685	Stegastes_partitus
ENSHCOG00000005566	arl1	92	95.210	ENSSSCG00000000870	ARL1	100	95.028	Sus_scrofa
ENSHCOG00000005566	arl1	99	94.972	ENSTGUG00000009085	-	100	94.972	Taeniopygia_guttata
ENSHCOG00000005566	arl1	100	95.580	ENSTRUG00000006254	arl1	100	95.580	Takifugu_rubripes
ENSHCOG00000005566	arl1	100	95.028	ENSTNIG00000006920	arl1	99	95.028	Tetraodon_nigroviridis
ENSHCOG00000005566	arl1	92	93.452	ENSTBEG00000015546	ARL1	100	93.407	Tupaia_belangeri
ENSHCOG00000005566	arl1	92	95.210	ENSTTRG00000017202	ARL1	95	95.028	Tursiops_truncatus
ENSHCOG00000005566	arl1	92	95.210	ENSUMAG00000019547	ARL1	100	95.028	Ursus_maritimus
ENSHCOG00000005566	arl1	92	95.210	ENSVPAG00000011621	ARL1	95	95.028	Vicugna_pacos
ENSHCOG00000005566	arl1	92	95.210	ENSVVUG00000018044	ARL1	100	95.028	Vulpes_vulpes
ENSHCOG00000005566	arl1	100	96.133	ENSXETG00000002540	arl1	100	96.133	Xenopus_tropicalis
ENSHCOG00000005566	arl1	99	96.089	ENSXMAG00000028338	arl1	100	96.089	Xiphophorus_maculatus