EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHCOG00000005592 (Gene tree)
Gene ID: 109523735
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Hippocampus_comes
Status: putative
Strand: Minus strand
Length: 3827 bases
Position: chrKV880199.1:105316-109142
Accession: 109523735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHCOP00000004183	RRM_1	PF00076.22	5.5e-32	1	2
ENSHCOP00000004183	RRM_1	PF00076.22	5.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHCOT00000007472	-	1025	XM_019883097	ENSHCOP00000004183	293 (aa)	XP_019738656	UPI00094F3654

Gene Model

Click here to download ENSHCOG00000005592's gene model file

Pathways

Pathway ID	Pathway Name	Source
hcq03040	Spliceosome	KEGG
hcq05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSHCOG00000005592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHCOG00000005592	srsf5b	80	56.198	ENSHCOG00000012540	srsf4	66	60.000
ENSHCOG00000005592	srsf5b	62	59.016	ENSHCOG00000002740	srsf6a	55	59.016
ENSHCOG00000005592	srsf5b	64	69.681	ENSHCOG00000017557	srsf5a	61	69.681
ENSHCOG00000005592	srsf5b	58	44.318	ENSHCOG00000018918	srsf1a	64	46.857
ENSHCOG00000005592	srsf5b	58	43.750	ENSHCOG00000008016	-	63	41.573

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHCOG00000005592	srsf5b	64	77.128	ENSG00000100650	SRSF5	98	71.212	Homo_sapiens
ENSHCOG00000005592	srsf5b	66	88.021	ENSAPOG00000008642	srsf5b	65	88.542	Acanthochromis_polyacanthus
ENSHCOG00000005592	srsf5b	64	77.128	ENSAMEG00000014574	SRSF5	67	75.521	Ailuropoda_melanoleuca
ENSHCOG00000005592	srsf5b	100	76.744	ENSACIG00000010742	srsf5b	81	87.879	Amphilophus_citrinellus
ENSHCOG00000005592	srsf5b	66	88.021	ENSAOCG00000005719	srsf5b	65	88.542	Amphiprion_ocellaris
ENSHCOG00000005592	srsf5b	66	88.021	ENSAPEG00000007830	srsf5b	65	88.542	Amphiprion_percula
ENSHCOG00000005592	srsf5b	88	79.767	ENSATEG00000019112	srsf5b	64	87.500	Anabas_testudineus
ENSHCOG00000005592	srsf5b	64	75.532	ENSAPLG00000014681	SRSF5	69	74.611	Anas_platyrhynchos
ENSHCOG00000005592	srsf5b	64	78.191	ENSACAG00000005143	SRSF5	69	76.562	Anolis_carolinensis
ENSHCOG00000005592	srsf5b	64	77.128	ENSANAG00000027977	-	76	88.000	Aotus_nancymaae
ENSHCOG00000005592	srsf5b	100	76.412	ENSACLG00000026424	srsf5b	64	88.542	Astatotilapia_calliptera
ENSHCOG00000005592	srsf5b	66	85.492	ENSAMXG00000011932	srsf5b	84	82.576	Astyanax_mexicanus
ENSHCOG00000005592	srsf5b	64	77.128	ENSBTAG00000011596	SRSF5	67	75.521	Bos_taurus
ENSHCOG00000005592	srsf5b	64	77.128	ENSCJAG00000014884	SRSF5	76	88.000	Callithrix_jacchus
ENSHCOG00000005592	srsf5b	64	77.128	ENSCAFG00000016589	SRSF5	67	75.521	Canis_familiaris
ENSHCOG00000005592	srsf5b	64	77.128	ENSCAFG00020005661	SRSF5	67	75.521	Canis_lupus_dingo
ENSHCOG00000005592	srsf5b	64	77.128	ENSCHIG00000016794	SRSF5	66	75.521	Capra_hircus
ENSHCOG00000005592	srsf5b	64	77.128	ENSTSYG00000007786	SRSF5	76	88.000	Carlito_syrichta
ENSHCOG00000005592	srsf5b	64	77.128	ENSCAPG00000008801	SRSF5	66	75.521	Cavia_aperea
ENSHCOG00000005592	srsf5b	64	77.128	ENSCPOG00000039926	SRSF5	66	75.521	Cavia_porcellus
ENSHCOG00000005592	srsf5b	64	77.128	ENSCCAG00000029002	SRSF5	76	88.000	Cebus_capucinus
ENSHCOG00000005592	srsf5b	64	77.128	ENSCATG00000045051	SRSF5	76	88.000	Cercocebus_atys
ENSHCOG00000005592	srsf5b	64	77.128	ENSCLAG00000004755	SRSF5	67	75.521	Chinchilla_lanigera
ENSHCOG00000005592	srsf5b	64	77.128	ENSCSAG00000013041	SRSF5	67	75.521	Chlorocebus_sabaeus
ENSHCOG00000005592	srsf5b	64	77.660	ENSCPBG00000021653	SRSF5	68	76.042	Chrysemys_picta_bellii
ENSHCOG00000005592	srsf5b	64	77.128	ENSCANG00000030560	SRSF5	76	88.000	Colobus_angolensis_palliatus
ENSHCOG00000005592	srsf5b	64	77.128	ENSCGRG00001015339	Srsf5	68	75.521	Cricetulus_griseus_chok1gshd
ENSHCOG00000005592	srsf5b	64	77.128	ENSCGRG00000009833	Srsf5	68	75.521	Cricetulus_griseus_crigri
ENSHCOG00000005592	srsf5b	80	76.078	ENSCSEG00000003801	srsf5b	66	87.500	Cynoglossus_semilaevis
ENSHCOG00000005592	srsf5b	66	86.979	ENSCVAG00000017240	srsf5b	58	89.062	Cyprinodon_variegatus
ENSHCOG00000005592	srsf5b	65	86.243	ENSDARG00000027734	srsf5b	90	81.818	Danio_rerio
ENSHCOG00000005592	srsf5b	64	77.128	ENSDNOG00000006160	SRSF5	68	75.521	Dasypus_novemcinctus
ENSHCOG00000005592	srsf5b	64	77.128	ENSDORG00000003989	Srsf5	68	75.521	Dipodomys_ordii
ENSHCOG00000005592	srsf5b	64	74.468	ENSETEG00000020396	SRSF5	68	73.958	Echinops_telfairi
ENSHCOG00000005592	srsf5b	64	62.051	ENSEBUG00000006229	srsf5b	68	61.702	Eptatretus_burgeri
ENSHCOG00000005592	srsf5b	64	77.128	ENSEASG00005016615	SRSF5	67	75.521	Equus_asinus_asinus
ENSHCOG00000005592	srsf5b	64	77.128	ENSECAG00000026873	SRSF5	90	70.149	Equus_caballus
ENSHCOG00000005592	srsf5b	66	87.113	ENSELUG00000019852	srsf5b	85	79.861	Esox_lucius
ENSHCOG00000005592	srsf5b	64	77.128	ENSFCAG00000008848	SRSF5	75	88.000	Felis_catus
ENSHCOG00000005592	srsf5b	64	76.596	ENSFALG00000004979	SRSF5	68	75.521	Ficedula_albicollis
ENSHCOG00000005592	srsf5b	64	77.128	ENSFDAG00000011562	SRSF5	68	75.521	Fukomys_damarensis
ENSHCOG00000005592	srsf5b	66	87.500	ENSFHEG00000009476	srsf5b	61	88.542	Fundulus_heteroclitus
ENSHCOG00000005592	srsf5b	66	74.779	ENSGMOG00000000595	srsf5b	99	76.549	Gadus_morhua
ENSHCOG00000005592	srsf5b	64	76.064	ENSGALG00000009421	SRSF5	88	68.939	Gallus_gallus
ENSHCOG00000005592	srsf5b	91	77.091	ENSGAFG00000002865	srsf5b	62	88.542	Gambusia_affinis
ENSHCOG00000005592	srsf5b	65	67.755	ENSGACG00000007834	srsf5b	86	84.559	Gasterosteus_aculeatus
ENSHCOG00000005592	srsf5b	64	77.660	ENSGAGG00000004447	SRSF5	68	76.042	Gopherus_agassizii
ENSHCOG00000005592	srsf5b	64	77.128	ENSGGOG00000016462	SRSF5	76	88.000	Gorilla_gorilla
ENSHCOG00000005592	srsf5b	100	75.920	ENSHBUG00000012462	srsf5b	93	85.606	Haplochromis_burtoni
ENSHCOG00000005592	srsf5b	64	76.596	ENSHGLG00000010147	SRSF5	67	75.000	Heterocephalus_glaber_female
ENSHCOG00000005592	srsf5b	80	48.750	ENSHGLG00100000095	-	62	56.522	Heterocephalus_glaber_male
ENSHCOG00000005592	srsf5b	64	76.596	ENSHGLG00100015328	SRSF5	67	75.000	Heterocephalus_glaber_male
ENSHCOG00000005592	srsf5b	64	77.128	ENSSTOG00000020672	SRSF5	67	75.521	Ictidomys_tridecemlineatus
ENSHCOG00000005592	srsf5b	64	77.128	ENSJJAG00000001688	Srsf5	67	75.521	Jaculus_jaculus
ENSHCOG00000005592	srsf5b	92	78.022	ENSKMAG00000020486	srsf5b	84	84.091	Kryptolebias_marmoratus
ENSHCOG00000005592	srsf5b	66	86.458	ENSLBEG00000013647	srsf5b	64	86.979	Labrus_bergylta
ENSHCOG00000005592	srsf5b	64	78.723	ENSLACG00000005874	SRSF5	68	77.083	Latimeria_chalumnae
ENSHCOG00000005592	srsf5b	64	80.829	ENSLOCG00000012438	srsf5b	69	80.829	Lepisosteus_oculatus
ENSHCOG00000005592	srsf5b	64	76.596	ENSLAFG00000005260	SRSF5	67	75.000	Loxodonta_africana
ENSHCOG00000005592	srsf5b	64	77.128	ENSMFAG00000002393	SRSF5	76	88.000	Macaca_fascicularis
ENSHCOG00000005592	srsf5b	64	77.128	ENSMNEG00000030872	SRSF5	76	88.000	Macaca_nemestrina
ENSHCOG00000005592	srsf5b	64	77.128	ENSMLEG00000030017	SRSF5	76	88.000	Mandrillus_leucophaeus
ENSHCOG00000005592	srsf5b	88	78.988	ENSMAMG00000002673	srsf5b	64	87.500	Mastacembelus_armatus
ENSHCOG00000005592	srsf5b	100	76.412	ENSMZEG00005003550	srsf5b	64	88.542	Maylandia_zebra
ENSHCOG00000005592	srsf5b	51	71.812	ENSMGAG00000011835	SRSF5	63	70.588	Meleagris_gallopavo
ENSHCOG00000005592	srsf5b	64	77.128	ENSMAUG00000009544	Srsf5	67	75.521	Mesocricetus_auratus
ENSHCOG00000005592	srsf5b	64	77.128	ENSMICG00000037432	-	76	88.000	Microcebus_murinus
ENSHCOG00000005592	srsf5b	64	77.128	ENSMOCG00000013134	Srsf5	67	75.521	Microtus_ochrogaster
ENSHCOG00000005592	srsf5b	65	85.714	ENSMMOG00000000137	srsf5b	93	71.642	Mola_mola
ENSHCOG00000005592	srsf5b	64	77.660	ENSMODG00000011362	SRSF5	68	76.042	Monodelphis_domestica
ENSHCOG00000005592	srsf5b	92	77.860	ENSMALG00000021875	srsf5b	84	87.121	Monopterus_albus
ENSHCOG00000005592	srsf5b	64	77.128	ENSMUSG00000021134	Srsf5	98	84.444	Mus_musculus
ENSHCOG00000005592	srsf5b	64	77.128	MGP_PahariEiJ_G0029659	Srsf5	68	75.521	Mus_pahari
ENSHCOG00000005592	srsf5b	64	77.128	ENSMPUG00000007458	SRSF5	67	75.521	Mustela_putorius_furo
ENSHCOG00000005592	srsf5b	64	77.128	ENSMLUG00000011939	SRSF5	65	75.521	Myotis_lucifugus
ENSHCOG00000005592	srsf5b	64	77.128	ENSNGAG00000010073	-	67	75.521	Nannospalax_galili
ENSHCOG00000005592	srsf5b	100	75.585	ENSNBRG00000001285	srsf5b	65	89.062	Neolamprologus_brichardi
ENSHCOG00000005592	srsf5b	64	77.128	ENSNLEG00000001615	SRSF5	76	88.000	Nomascus_leucogenys
ENSHCOG00000005592	srsf5b	64	77.128	ENSOPRG00000008286	SRSF5	65	75.521	Ochotona_princeps
ENSHCOG00000005592	srsf5b	64	77.128	ENSODEG00000013469	-	68	75.521	Octodon_degus
ENSHCOG00000005592	srsf5b	64	76.064	ENSODEG00000000700	-	69	73.438	Octodon_degus
ENSHCOG00000005592	srsf5b	100	76.412	ENSONIG00000005759	srsf5b	64	88.542	Oreochromis_niloticus
ENSHCOG00000005592	srsf5b	64	73.936	ENSOANG00000013336	SRSF5	63	76.404	Ornithorhynchus_anatinus
ENSHCOG00000005592	srsf5b	64	77.128	ENSOCUG00000009274	SRSF5	66	75.521	Oryctolagus_cuniculus
ENSHCOG00000005592	srsf5b	66	87.047	ENSORLG00000029854	srsf5b	59	86.979	Oryzias_latipes
ENSHCOG00000005592	srsf5b	92	76.753	ENSORLG00015001720	srsf5b	65	87.500	Oryzias_latipes_hsok
ENSHCOG00000005592	srsf5b	64	77.128	ENSOGAG00000015122	SRSF5	67	75.521	Otolemur_garnettii
ENSHCOG00000005592	srsf5b	64	77.128	ENSPPAG00000029921	SRSF5	76	88.000	Pan_paniscus
ENSHCOG00000005592	srsf5b	64	77.128	ENSPPRG00000012903	SRSF5	75	88.000	Panthera_pardus
ENSHCOG00000005592	srsf5b	64	77.128	ENSPTIG00000018589	SRSF5	75	88.000	Panthera_tigris_altaica
ENSHCOG00000005592	srsf5b	64	77.128	ENSPTRG00000006488	SRSF5	76	88.000	Pan_troglodytes
ENSHCOG00000005592	srsf5b	64	77.128	ENSPANG00000021091	SRSF5	76	88.000	Papio_anubis
ENSHCOG00000005592	srsf5b	64	77.660	ENSPSIG00000012522	SRSF5	69	76.042	Pelodiscus_sinensis
ENSHCOG00000005592	srsf5b	64	77.128	ENSPEMG00000020173	Srsf5	68	75.521	Peromyscus_maniculatus_bairdii
ENSHCOG00000005592	srsf5b	66	58.291	ENSPMAG00000007790	srsf5b	66	60.938	Petromyzon_marinus
ENSHCOG00000005592	srsf5b	64	77.660	ENSPCIG00000011877	SRSF5	68	76.042	Phascolarctos_cinereus
ENSHCOG00000005592	srsf5b	91	78.182	ENSPFOG00000017700	srsf5b	62	89.062	Poecilia_formosa
ENSHCOG00000005592	srsf5b	91	78.909	ENSPLAG00000006480	srsf5b	63	89.062	Poecilia_latipinna
ENSHCOG00000005592	srsf5b	91	78.182	ENSPMEG00000012751	srsf5b	84	85.606	Poecilia_mexicana
ENSHCOG00000005592	srsf5b	91	76.364	ENSPREG00000010381	srsf5b	62	88.542	Poecilia_reticulata
ENSHCOG00000005592	srsf5b	64	77.128	ENSPPYG00000005945	SRSF5	67	75.521	Pongo_abelii
ENSHCOG00000005592	srsf5b	53	74.359	ENSPCAG00000004405	SRSF5	100	75.000	Procavia_capensis
ENSHCOG00000005592	srsf5b	64	77.128	ENSPCOG00000014442	SRSF5	90	70.149	Propithecus_coquereli
ENSHCOG00000005592	srsf5b	100	69.565	ENSPNYG00000002669	srsf5b	94	85.606	Pundamilia_nyererei
ENSHCOG00000005592	srsf5b	66	84.974	ENSPNAG00000011262	srsf5b	84	81.818	Pygocentrus_nattereri
ENSHCOG00000005592	srsf5b	64	77.128	ENSRNOG00000005513	Srsf5	68	75.521	Rattus_norvegicus
ENSHCOG00000005592	srsf5b	64	77.128	ENSRBIG00000013003	SRSF5	76	88.000	Rhinopithecus_bieti
ENSHCOG00000005592	srsf5b	64	77.128	ENSRROG00000043407	SRSF5	76	88.000	Rhinopithecus_roxellana
ENSHCOG00000005592	srsf5b	64	77.128	ENSSBOG00000030784	SRSF5	76	88.000	Saimiri_boliviensis_boliviensis
ENSHCOG00000005592	srsf5b	64	77.660	ENSSHAG00000002871	SRSF5	68	76.042	Sarcophilus_harrisii
ENSHCOG00000005592	srsf5b	66	83.582	ENSSMAG00000019728	srsf5b	62	83.582	Scophthalmus_maximus
ENSHCOG00000005592	srsf5b	66	86.979	ENSSDUG00000005766	srsf5b	66	88.021	Seriola_dumerili
ENSHCOG00000005592	srsf5b	66	86.458	ENSSLDG00000023255	srsf5b	84	84.848	Seriola_lalandi_dorsalis
ENSHCOG00000005592	srsf5b	64	65.426	ENSSARG00000001059	SRSF5	67	64.583	Sorex_araneus
ENSHCOG00000005592	srsf5b	64	75.127	ENSSPUG00000002464	SRSF5	90	67.133	Sphenodon_punctatus
ENSHCOG00000005592	srsf5b	66	87.500	ENSSPAG00000015325	srsf5b	65	88.021	Stegastes_partitus
ENSHCOG00000005592	srsf5b	64	77.128	ENSSSCG00000032583	SRSF5	67	75.521	Sus_scrofa
ENSHCOG00000005592	srsf5b	64	76.596	ENSTGUG00000011425	SRSF5	68	75.521	Taeniopygia_guttata
ENSHCOG00000005592	srsf5b	66	84.896	ENSTRUG00000017811	srsf5b	60	84.896	Takifugu_rubripes
ENSHCOG00000005592	srsf5b	66	83.854	ENSTNIG00000016411	srsf5b	67	83.854	Tetraodon_nigroviridis
ENSHCOG00000005592	srsf5b	64	75.000	ENSTBEG00000001972	SRSF5	66	73.958	Tupaia_belangeri
ENSHCOG00000005592	srsf5b	64	77.005	ENSTTRG00000003318	SRSF5	66	75.393	Tursiops_truncatus
ENSHCOG00000005592	srsf5b	64	77.128	ENSUAMG00000014184	SRSF5	67	75.521	Ursus_americanus
ENSHCOG00000005592	srsf5b	64	87.097	ENSUMAG00000009827	SRSF5	67	75.521	Ursus_maritimus
ENSHCOG00000005592	srsf5b	64	77.128	ENSVPAG00000006448	SRSF5	67	75.521	Vicugna_pacos
ENSHCOG00000005592	srsf5b	64	77.128	ENSVVUG00000003790	SRSF5	67	75.521	Vulpes_vulpes
ENSHCOG00000005592	srsf5b	65	79.058	ENSXETG00000002211	srsf5	68	74.000	Xenopus_tropicalis
ENSHCOG00000005592	srsf5b	91	70.909	ENSXCOG00000001570	srsf5b	65	89.062	Xiphophorus_couchianus
ENSHCOG00000005592	srsf5b	88	80.843	ENSXMAG00000026416	srsf5b	84	87.879	Xiphophorus_maculatus